Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO732G0215 Papaver somniferum HOM05D007841 ORTHO05D009919 8.3e-32 139.8 73 100.0
PSO675G0834 Papaver somniferum HOM05D007841 ORTHO05D009919 3.2e-28 127.9 67 98.5
CANSAT25G3347 Cannabis sativa HOM05D007841 ORTHO05D009919 1.7e-24 115.5 64 90.6
CANSAT25G3825 Cannabis sativa HOM05D007841 ORTHO05D009919 1.7e-24 115.5 64 90.6
Hma1.2p1_2138F.1_g314930 Hydrangea macrophylla HOM05D007841 ORTHO05D009919 2.2e-24 115.2 73 80.8
Atru.chr5.91 Acer truncatum HOM05D007841 ORTHO05D009919 4.9e-24 114.0 63 88.9
Phvul.008G138900 Phaseolus vulgaris HOM05D007841 ORTHO05D009919 1.4e-23 112.5 67 83.6
Actinidia30942 Actinidia chinensis HOM05D007841 ORTHO05D009919 2.4e-23 111.7 73 76.7
HanXRQChr01g0019691 Helianthus annuus HOM05D007841 ORTHO05D009919 2.4e-23 111.7 73 79.5
Lj1g0014858 Lotus japonicus HOM05D007841 ORTHO05D009919 2.4e-23 111.7 67 85.1
Prupe.2G120100 Prunus persica HOM05D007841 ORTHO05D009919 2.4e-23 111.7 67 82.1
ECA248G0141 Erigeron canadensis HOM05D007841 ORTHO05D009919 3.1e-23 111.3 63 87.3
Gohir.D12G101400 Gossypium hirsutum HOM05D007841 ORTHO05D009919 3.1e-23 111.3 63 85.7
Gorai.008G110500 Gossypium raimondii HOM05D007841 ORTHO05D009919 3.1e-23 111.3 63 85.7
Glyma.08G340600 Glycine max HOM05D007841 ORTHO05D009919 4.1e-23 110.9 66 83.3
Psat3g152880 Pisum sativum HOM05D007841 ORTHO05D009919 5.4e-23 110.5 67 83.6
EL10Ac1g00736 Beta vulgaris HOM05D007841 ORTHO05D009919 7.0e-23 110.2 66 81.8
Lsat_1_v5_gn_1_83981 Lactuca sativa HOM05D007841 ORTHO05D009919 7.0e-23 110.2 63 85.7
Lalb_Chr03g0040951 Lupinus albus HOM05D007841 ORTHO05D009919 7.0e-23 110.2 67 85.1
Medtr7g050540 Medicago truncatula HOM05D007841 ORTHO05D009919 7.0e-23 110.2 67 83.6
PGR004G1954 Punica granatum HOM05D007841 ORTHO05D009919 7.0e-23 110.2 67 82.1
CAN.G756.38 Capsicum annuum HOM05D007841 ORTHO05D009919 9.1e-23 109.8 73 74.0
Oeu034848.1 Olea europaea HOM05D007841 ORTHO05D009919 9.1e-23 109.8 71 78.9
Duzib138G1421 Durio zibethinus HOM05D007841 ORTHO05D009919 1.6e-22 109.0 63 84.1
RcHm_v2.0_Chr1g0345181 Rosa chinensis HOM05D007841 ORTHO05D009919 1.6e-22 109.0 73 76.7
AL1G10060 Arabidopsis lyrata HOM05D007841 ORTHO05D009919 2.0e-22 108.6 66 83.3
Carub.0001s0004 Capsella rubella HOM05D007841 ORTHO05D009919 2.0e-22 108.6 67 82.1
CARHR000160 Cardamine hirsuta HOM05D007841 ORTHO05D009919 2.0e-22 108.6 66 83.3
THA.LOC104814059 Tarenaya hassleriana HOM05D007841 ORTHO05D009919 2.0e-22 108.6 67 82.1
BcaB03g13636 Brassica carinata HOM05D000300 ORTHO05D000383 2.7e-22 108.2 73 76.7
Cc02_g25410 Coffea canephora HOM05D007841 ORTHO05D009919 2.7e-22 108.2 66 80.3
Thhalv10009237m.g Eutrema salsugineum HOM05D007841 ORTHO05D009919 2.7e-22 108.2 73 76.7
Gohir.A12G098200 Gossypium hirsutum HOM05D007841 ORTHO05D009919 2.7e-22 108.2 63 82.5
Eucgr.D01199 Eucalyptus grandis HOM05D007841 ORTHO05D009919 3.5e-22 107.8 67 82.1
AT1G02160 Arabidopsis thaliana HOM05D007841 ORTHO05D009919 4.5e-22 107.5 71 78.9
arahy.Tifrunner.gnm1.ann1.K94MSK Arachis hypogaea HOM05D007841 ORTHO05D009919 4.5e-22 107.5 66 81.8
CiPaw.14G018000 Carya illinoinensis HOM05D007841 ORTHO05D009919 4.5e-22 107.5 67 79.1
CsaV3_3G010620 Cucumis sativus L. HOM05D007841 ORTHO05D009919 5.9e-22 107.1 63 85.7
Aqoxy7G00835 Aquilegia oxysepala HOM05D007841 ORTHO05D009919 7.7e-22 106.7 64 82.8
COL.COLO4_12370 Corchorus olitorius HOM05D007841 ORTHO05D009919 7.7e-22 106.7 63 82.5
Sed0011386 Sechium edule HOM05D007841 ORTHO05D009919 7.7e-22 106.7 69 79.7
C05p00040 Brassica napus HOM05D007841 ORTHO05D009919 1.0e-21 106.3 73 75.3
BolC5t28791H Brassica oleracea HOM05D007841 ORTHO05D009919 1.0e-21 106.3 73 75.3
Solyc01g088770.3 Solanum lycopersicum HOM05D007841 ORTHO05D009919 1.0e-21 106.3 73 71.2
Sopen01g035610 Solanum pennellii HOM05D007841 ORTHO05D009919 1.0e-21 106.3 73 71.2
PGSC0003DMG400001726 Solanum tuberosum HOM05D007841 ORTHO05D009919 1.0e-21 106.3 73 71.2
Migut.N01723 Erythranthe guttata HOM05D007841 ORTHO05D009919 1.3e-21 105.9 73 74.0
MD02G1221100 Malus domestica HOM05D007841 ORTHO05D009919 1.3e-21 105.9 67 77.6
ClCG05G003010 Citrullus lanatus HOM05D007841 ORTHO05D009919 1.7e-21 105.5 63 84.1
Manes.05G057100 Manihot esculenta HOM05D007841 ORTHO05D009919 2.9e-21 104.8 57 87.7
Potri.014G051850 Populus trichocarpa HOM05D007841 ORTHO05D009919 3.8e-21 104.4 73 75.3
MD07G1096500 Malus domestica HOM05D007841 ORTHO05D009919 8.6e-21 103.2 67 79.1
Thecc.01G400700 Theobroma cacao HOM05D007841 ORTHO05D009919 1.9e-20 102.1 74 75.7
PSO732G0130 Papaver somniferum HOM05D007841 ORTHO05D009919 7.2e-20 100.1 57 93.0
FvH4_7g09140 Fragaria vesca HOM05D007841 ORTHO05D009919 2.1e-19 98.6 71 74.6
unitig_22.g6702 Utricularia gibba HOM05D007841 ORTHO05D009919 4.7e-19 97.4 71 70.4
Os04g0665000 Oryza sativa ssp. japonica HOM05D007841 ORTHO05D009919 8.0e-19 96.7 73 69.9
GSVIVG01018320001 Vitis vinifera HOM05D007841 ORTHO05D009919 1.0e-18 96.3 73 72.6
Zm00001eb067220 Zea mays HOM05D007841 ORTHO05D009919 1.2e-17 92.8 63 76.2
FAN06G3108 Fragaria x ananassa HOM05D007841 ORTHO05D009919 2.0e-17 92.0 68 72.1
Haze_02887 Corylus avellana HOM05D000061 ORTHO05D000915 7.5e-17 90.1 61 73.8
Ciclev10023064m.g Citrus clementina HOM05D007841 ORTHO05D009919 3.7e-16 87.8 54 79.6
Nn6g33742 Nelumbo nucifera HOM05D007841 ORTHO05D009919 8.3e-16 86.7 52 78.8
Nitab4.5_0004425g0050 Nicotiana tabacum HOM05D007841 ORTHO05D009919 1.4e-15 85.9 64 67.2
Hund17114 Selenicereus undatus HOM05D007841 ORTHO05D009919 2.4e-15 85.1 50 80.0
BraA10t42285Z Brassica rapa HOM05D007841 ORTHO05D009919 7.0e-15 83.6 51 78.4
CSS0006405 Camellia sinensis var. sinensis HOM05D007841 ORTHO05D009919 7.0e-15 83.6 57 73.7
Sp1g00090 Schrenkiella parvula HOM05D007841 ORTHO05D009919 9.2e-15 83.2 57 71.9
SalBow4G0679 Salvia bowleyana HOM05D007841 ORTHO05D009919 1.6e-14 82.4 57 68.4
arahy.Tifrunner.gnm1.ann1.X5EUJ4 Arachis hypogaea HOM05D007841 ORTHO05D009919 2.7e-14 81.6 51 78.4
Peaxi162Scf00793g00363 Petunia axillaris HOM05D007841 ORTHO05D009919 2.7e-14 81.6 57 68.4
Sc02g0003210 Simmondsia chinensis HOM05D007841 ORTHO05D009919 7.8e-14 80.1 51 76.5
AUR62013771 Chenopodium quinoa HOM05D007841 ORTHO05D009919 5.0e-13 77.4 50 72.0
AUR62023385 Chenopodium quinoa HOM05D007841 ORTHO05D009919 5.0e-13 77.4 50 72.0
Pp3c22_2080 Physcomitrium patens HOM05D007841 ORTHO05D009919 5.0e-13 77.4 57 66.7
FAN01G1055 Fragaria x ananassa HOM05D007841 ORTHO05D009919 1.5e-12 75.9 55 72.7
FAN03G2201 Fragaria x ananassa HOM05D007841 ORTHO05D009919 1.5e-12 75.9 55 72.7
Sabra14G0036700 Salix brachista HOM05D007841 ORTHO05D009919 2.5e-12 75.1 41 90.2
Aa31LG1G11570 Aethionema arabicum HOM05D007841 ORTHO05D009919 5.6e-12 73.9 48 77.1
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 9.5e-12 73.2 45 82.2
AagrBONN_evm.TU.Sc2ySwM_228.3132 Anthoceros agrestis HOM05D007841 ORTHO05D009919 3.1e-10 68.2 52 65.4
Mapoly0181s0011 Marchantia polymorpha HOM05D007841 ORTHO05D009919 8.9e-10 66.6 67 50.7
Actinidia05779 Actinidia chinensis HOM05D007841 ORTHO05D009919 1.7e-08 62.4 33 81.8
CAN.G756.35 Capsicum annuum HOM05D007841 ORTHO05D009919 2.2e-08 62.0 36 83.3


User provided reference genes

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