Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO732G0197 Papaver somniferum HOM05D000915 ORTHO05D011770 1.1e-50 203.0 103 100.0
PSO017G2799 Papaver somniferum HOM05D000915 ORTHO05D001662 1.4e-13 79.7 41 95.1
PSO478G2752 Papaver somniferum HOM05D000915 ORTHO05D001662 1.4e-13 79.7 41 95.1
HPP92_027888 Vanilla planifolia HOM05D000915 ORTHO05D011770 3.9e-11 71.6 48 70.8
PSO063G2618 Papaver somniferum HOM05D000915 ORTHO05D001662 1.1e-10 70.1 41 80.5
PSO832G0632 Papaver somniferum HOM05D000915 ORTHO05D001662 1.1e-10 70.1 41 80.5
Nn3g16951 Nelumbo nucifera HOM05D000915 ORTHO05D001662 1.5e-10 69.7 41 78.0
Nn4g22862 Nelumbo nucifera HOM05D000915 ORTHO05D001662 1.5e-10 69.7 41 78.0
HPP92_018295 Vanilla planifolia HOM05D000915 ORTHO05D011770 2.5e-10 68.9 45 68.9
CDE05G1821 Ceratophyllum demersum HOM05D000915 ORTHO05D001662 4.3e-10 68.2 41 75.6
MD17G1038500 Malus domestica HOM05D000915 ORTHO05D001662 5.6e-10 67.8 41 78.0
Zm00001eb372100 Zea mays HOM05D000915 ORTHO05D011770 5.6e-10 67.8 41 75.6
Gohir.A11G068000 Gossypium hirsutum HOM05D000915 ORTHO05D001662 7.3e-10 67.4 41 78.0
Gohir.D11G071800 Gossypium hirsutum HOM05D000915 ORTHO05D001662 7.3e-10 67.4 41 78.0
Gorai.007G077100 Gossypium raimondii HOM05D000915 ORTHO05D001662 7.3e-10 67.4 41 78.0
Os06g0234100 Oryza sativa ssp. japonica HOM05D000915 ORTHO05D001662 7.3e-10 67.4 41 75.6
Cfa007455 Carpinus fangiana HOM05D000915 ORTHO05D001662 9.6e-10 67.0 41 78.0
HanXRQChr09g0265991 Helianthus annuus HOM05D000915 ORTHO05D001662 9.6e-10 67.0 41 75.6
QL02p077386 Quercus lobata HOM05D000915 ORTHO05D001662 9.6e-10 67.0 41 78.0
Thecc.04G005200 Theobroma cacao HOM05D000915 ORTHO05D001662 9.6e-10 67.0 41 75.6
CiPaw.03G035700 Carya illinoinensis HOM05D000915 ORTHO05D001662 1.3e-09 66.6 41 75.6
FAN02G0262 Fragaria x ananassa HOM05D000915 ORTHO05D001662 1.6e-09 66.2 41 73.2
FAN09G4278 Fragaria x ananassa HOM05D000915 ORTHO05D001662 1.6e-09 66.2 41 73.2
Zm00001eb194670 Zea mays HOM05D000915 ORTHO05D001662 1.6e-09 66.2 41 78.0
Zm00001eb254270 Zea mays HOM05D000915 ORTHO05D001662 1.6e-09 66.2 41 78.0
RcHm_v2.0_Chr2g0170661 Rosa chinensis HOM05D000915 ORTHO05D001662 2.1e-09 65.9 41 73.2
BcaB06g27749 Brassica carinata HOM05D000915 ORTHO05D001662 2.8e-09 65.5 41 73.2
Dinv35036 Davidia involucrata HOM05D000915 ORTHO05D001662 2.8e-09 65.5 41 73.2
Pp3c13_1290 Physcomitrium patens HOM05D000915 ORTHO05D001662 2.8e-09 65.5 44 68.2
Pp3c13_1300 Physcomitrium patens HOM05D002868 ORTHO05D001662 2.8e-09 65.5 44 68.2
VMungo1383G1675 Vigna mungo HOM05D000915 ORTHO05D001662 2.8e-09 65.5 41 73.2
arahy.Tifrunner.gnm1.ann1.0X3R4P Arachis hypogaea HOM05D000915 ORTHO05D001662 3.6e-09 65.1 41 73.2
arahy.Tifrunner.gnm1.ann1.KR1ZKD Arachis hypogaea HOM05D000915 ORTHO05D001662 3.6e-09 65.1 41 73.2
BcaB06g27456 Brassica carinata HOM05D000915 ORTHO05D001662 3.6e-09 65.1 41 73.2
BcaB06g27457 Brassica carinata HOM05D000915 ORTHO05D011770 3.6e-09 65.1 41 73.2
A04p13110 Brassica napus HOM05D000915 ORTHO05D001662 3.6e-09 65.1 41 73.2
C04p46860 Brassica napus HOM05D000915 ORTHO05D001662 3.6e-09 65.1 41 73.2
BolC4t26274H Brassica oleracea HOM05D000915 ORTHO05D001662 3.6e-09 65.1 41 73.2
BraA04t16970Z Brassica rapa HOM05D000915 ORTHO05D001662 3.6e-09 65.1 41 73.2
Duzib147G1341 Durio zibethinus HOM05D000915 ORTHO05D001662 3.6e-09 65.1 41 73.2
Thhalv10027697m.g Eutrema salsugineum HOM05D000915 ORTHO05D001662 3.6e-09 65.1 41 73.2
Lj7A412T33 Lonicera japonica HOM05D000915 ORTHO05D001662 3.6e-09 65.1 41 73.2
Sp7g01770 Schrenkiella parvula HOM05D000915 ORTHO05D001662 3.6e-09 65.1 41 73.2
THA.LOC104823918 Tarenaya hassleriana HOM05D000915 ORTHO05D001662 3.6e-09 65.1 41 73.2
GSVIVG01032512001 Vitis vinifera HOM05D000915 ORTHO05D001662 3.6e-09 65.1 41 70.7
ECA232G4456 Erigeron canadensis HOM05D000915 ORTHO05D001662 4.8e-09 64.7 41 73.2
Mapoly0005s0061 Marchantia polymorpha HOM05D000915 ORTHO05D001662 4.8e-09 64.7 41 73.2
Manes.17G124100 Manihot esculenta HOM05D000915 ORTHO05D001662 6.2e-09 64.3 41 70.7
TWI56G1083 Tripterygium wilfordii HOM05D000915 ORTHO05D001662 6.2e-09 64.3 41 70.7
ATR1149G128 Amborella trichopoda HOM05D000915 ORTHO05D001662 8.1e-09 63.9 41 70.7
Glyma.01G077600 Glycine max HOM05D000915 ORTHO05D001662 8.1e-09 63.9 41 70.7
Lalb_Chr12g0208111 Lupinus albus HOM05D000915 ORTHO05D001662 8.1e-09 63.9 41 75.6
Nn3g16950 Nelumbo nucifera HOM05D000915 ORTHO05D001662 8.1e-09 63.9 41 70.7
Prupe.3G280500 Prunus persica HOM05D000915 ORTHO05D001662 8.1e-09 63.9 41 70.7
Hund12480 Selenicereus undatus HOM05D000915 ORTHO05D001662 8.1e-09 63.9 41 75.6
THA.LOC104805408 Tarenaya hassleriana HOM05D000915 ORTHO05D001662 8.1e-09 63.9 41 70.7
TAR371G0382 Trochodendron aralioides HOM05D000915 ORTHO05D001662 8.1e-09 63.9 41 70.7
Aa31LG9G1500 Aethionema arabicum HOM05D000915 ORTHO05D001662 1.1e-08 63.5 41 70.7
AagrBONN_evm.TU.Sc2ySwM_344.5250 Anthoceros agrestis HOM05D000915 ORTHO05D001662 1.1e-08 63.5 41 70.7
AL7G49830 Arabidopsis lyrata HOM05D000915 ORTHO05D001662 1.1e-08 63.5 41 70.7
AT5G40200 Arabidopsis thaliana HOM05D000915 ORTHO05D001662 1.1e-08 63.5 41 70.7
BcaC02g08824 Brassica carinata HOM05D000915 ORTHO05D001662 1.1e-08 63.5 41 70.7
A04p15720 Brassica napus HOM05D000915 ORTHO05D001662 1.1e-08 63.5 41 70.7
C04p50020 Brassica napus HOM05D000915 ORTHO05D001662 1.1e-08 63.5 41 70.7
BolC4t26595H Brassica oleracea HOM05D000915 ORTHO05D001662 1.1e-08 63.5 41 70.7
BraA04t17205Z Brassica rapa HOM05D000915 ORTHO05D001662 1.1e-08 63.5 41 70.7
Carub.0007s3545 Capsella rubella HOM05D000915 ORTHO05D001662 1.1e-08 63.5 41 70.7
CARHR261960 Cardamine hirsuta HOM05D000915 ORTHO05D001662 1.1e-08 63.5 41 70.7
Lsat_1_v5_gn_4_181721 Lactuca sativa HOM05D000915 ORTHO05D001662 1.1e-08 63.5 41 68.3
Phvul.008G153200 Phaseolus vulgaris HOM05D000915 ORTHO05D001662 1.1e-08 63.5 41 70.7
A06p06270 Brassica napus HOM05D000915 ORTHO05D001662 1.4e-08 63.2 40 72.5
PSO170G1469 Papaver somniferum HOM05D000915 ORTHO05D001662 1.4e-08 63.2 41 73.2
Aqoxy3G00939 Aquilegia oxysepala HOM05D000915 ORTHO05D001662 2.4e-08 62.4 41 68.3
CANSAT64G2543 Cannabis sativa HOM05D000915 ORTHO05D001662 2.4e-08 62.4 41 68.3
Medtr4g106730 Medicago truncatula HOM05D000915 ORTHO05D001662 2.4e-08 62.4 41 73.2
Psat4g057320 Pisum sativum HOM05D000915 ORTHO05D001662 2.4e-08 62.4 41 73.2
TPR.G37544 Trifolium pratense HOM05D000915 ORTHO05D001662 2.4e-08 62.4 41 73.2
Pp3c13_1020 Physcomitrium patens HOM05D000915 ORTHO05D001662 3.1e-08 62.0 41 68.3
PGR142G1186 Punica granatum HOM05D000915 ORTHO05D001662 3.1e-08 62.0 41 70.7
GSVIVG01007803001 Vitis vinifera HOM05D000915 ORTHO05D001662 3.1e-08 62.0 41 70.7
Hma1.2p1_0697F.1_g204900 Hydrangea macrophylla HOM05D000915 ORTHO05D001662 4.0e-08 61.6 41 68.3
CiPaw.04G023400 Carya illinoinensis HOM05D000915 ORTHO05D001662 5.3e-08 61.2 41 68.3
Solyc12g062290.2 Solanum lycopersicum HOM05D000915 ORTHO05D001662 5.3e-08 61.2 41 70.7
Aqoxy3G03054 Aquilegia oxysepala HOM05D000915 ORTHO05D001662 6.9e-08 60.8 41 68.3
CBR_g50405 Chara braunii HOM05D000915 ORTHO05D001662 6.9e-08 60.8 41 65.9
Duzib205G1883 Durio zibethinus HOM05D000915 ORTHO05D001662 6.9e-08 60.8 41 70.7
Gohir.A07G062200 Gossypium hirsutum HOM05D000915 ORTHO05D001662 6.9e-08 60.8 41 70.7
Gohir.D07G066801 Gossypium hirsutum HOM05D000915 ORTHO05D001662 6.9e-08 60.8 41 70.7
Nitab4.5_0004348g0100 Nicotiana tabacum HOM05D000915 ORTHO05D001662 6.9e-08 60.8 41 70.7
Peaxi162Scf00700g00067 Petunia axillaris HOM05D000915 ORTHO05D001662 6.9e-08 60.8 41 70.7
Pp3c3_290 Physcomitrium patens HOM05D000915 ORTHO05D001662 6.9e-08 60.8 43 62.8
SMO239G0193 Selaginella moellendorffii HOM05D000915 ORTHO05D001662 6.9e-08 60.8 41 65.9
Sc06g0002560 Simmondsia chinensis HOM05D000915 ORTHO05D001662 6.9e-08 60.8 41 63.4
Sopen12g025210 Solanum pennellii HOM05D000915 ORTHO05D001662 6.9e-08 60.8 41 70.7
PGSC0003DMG400021960 Solanum tuberosum HOM05D000915 ORTHO05D001662 6.9e-08 60.8 41 70.7
arahy.Tifrunner.gnm1.ann1.FM4BLQ Arachis hypogaea HOM05D000250 ORTHO05D012166 9.0e-08 60.5 41 63.4
Ca_21899_v3 Cicer arietinum L. HOM05D000915 ORTHO05D001662 9.0e-08 60.5 41 68.3
Ciclev10014711m.g Citrus clementina HOM05D000915 ORTHO05D001662 9.0e-08 60.5 41 68.3
arahy.Tifrunner.gnm1.ann1.27DD1R Arachis hypogaea HOM05D000915 ORTHO05D012166 1.2e-07 60.1 39 66.7
CSS0005886 Camellia sinensis var. sinensis HOM05D000915 ORTHO05D001662 1.2e-07 60.1 41 70.7
CAN.G1146.3 Capsicum annuum HOM05D000915 ORTHO05D001662 1.2e-07 60.1 41 68.3
CiPaw.11G030000 Carya illinoinensis HOM05D000915 ORTHO05D001662 1.5e-07 59.7 41 68.3
Cc07_g02480 Coffea canephora HOM05D000915 ORTHO05D011770 1.5e-07 59.7 41 63.4
COL.COLO4_24767 Corchorus olitorius HOM05D000915 ORTHO05D001662 1.5e-07 59.7 41 68.3
CsaV3_1G008290 Cucumis sativus L. HOM05D000915 ORTHO05D001662 1.5e-07 59.7 41 68.3
Duzib084G1068 Durio zibethinus HOM05D000915 ORTHO05D001662 1.5e-07 59.7 41 68.3
Glyma.05G035300 Glycine max HOM05D000915 ORTHO05D001662 1.5e-07 59.7 41 68.3
Glyma.17G092000 Glycine max HOM05D000915 ORTHO05D001662 1.5e-07 59.7 41 68.3
PGR044G1603 Punica granatum HOM05D000915 ORTHO05D001662 1.5e-07 59.7 41 68.3
Sed0022411 Sechium edule HOM05D000915 ORTHO05D001662 1.5e-07 59.7 41 68.3
VMungo1215G2242 Vigna mungo HOM05D000915 ORTHO05D001662 1.5e-07 59.7 41 68.3
arahy.Tifrunner.gnm1.ann1.TGAQ0L Arachis hypogaea HOM05D000915 ORTHO05D012166 2.0e-07 59.3 39 64.1
ClCG01G014060 Citrullus lanatus HOM05D000915 ORTHO05D001662 2.0e-07 59.3 41 68.3
MELO3C002245.2 Cucumis melo HOM05D000915 ORTHO05D001662 2.0e-07 59.3 40 70.0
Oeu031514.3 Olea europaea HOM05D000915 ORTHO05D001662 2.0e-07 59.3 42 66.7
Rhsim10G0026000 Rhododendron simsii HOM05D000915 ORTHO05D001662 2.0e-07 59.3 41 65.9
Hund02722 Selenicereus undatus HOM05D000915 ORTHO05D001662 2.0e-07 59.3 41 65.9
TAR622G0661 Trochodendron aralioides HOM05D000915 ORTHO05D001662 2.0e-07 59.3 41 68.3
CSS0027822 Camellia sinensis var. sinensis HOM05D000915 ORTHO05D001662 2.6e-07 58.9 41 68.3
DCAR_015035 Daucus carota HOM05D000915 ORTHO05D001662 2.6e-07 58.9 41 63.4
Actinidia04976 Actinidia chinensis HOM05D000915 ORTHO05D001662 3.4e-07 58.5 41 68.3
Actinidia33051 Actinidia chinensis HOM05D000915 ORTHO05D001662 3.4e-07 58.5 41 68.3
Cfa019083 Carpinus fangiana HOM05D000915 ORTHO05D001662 3.4e-07 58.5 41 65.9
Haze_07477 Corylus avellana HOM05D000915 ORTHO05D001662 3.4e-07 58.5 41 65.9
Lj4g0025156 Lotus japonicus HOM05D000915 ORTHO05D001662 3.4e-07 58.5 41 68.3
Phvul.003G198000 Phaseolus vulgaris HOM05D000915 ORTHO05D001662 3.4e-07 58.5 41 65.9
SMO118G0164 Selaginella moellendorffii HOM05D000915 ORTHO05D001662 3.4e-07 58.5 39 69.2
Thecc.03G007100 Theobroma cacao HOM05D000915 ORTHO05D001662 3.4e-07 58.5 39 69.2
vmacro05801 Vaccinium macrocarpon HOM05D000915 ORTHO05D001662 3.4e-07 58.5 41 63.4
Atru.chr9.2425 Acer truncatum HOM05D000915 ORTHO05D001662 4.5e-07 58.2 41 65.9
AUR62008261 Chenopodium quinoa HOM05D000915 ORTHO05D001662 5.8e-07 57.8 41 63.4
AUR62031021 Chenopodium quinoa HOM05D000915 ORTHO05D001662 5.8e-07 57.8 41 63.4
Cc04_g12960 Coffea canephora HOM05D000915 ORTHO05D001662 5.8e-07 57.8 41 65.9
Rhsim08G0169400 Rhododendron simsii HOM05D000915 ORTHO05D001662 5.8e-07 57.8 41 68.3
Ah.11g046040 Amaranthus hybridus HOM05D000915 ORTHO05D001662 7.6e-07 57.4 41 63.4
arahy.Tifrunner.gnm1.ann1.PPF7MC Arachis hypogaea HOM05D000915 ORTHO05D011770 7.6e-07 57.4 41 65.9
Dinv20684 Davidia involucrata HOM05D000915 ORTHO05D001662 7.6e-07 57.4 41 65.9
FvH4_5g04990 Fragaria vesca HOM05D000915 ORTHO05D001662 7.6e-07 57.4 41 63.4
FAN04G1070 Fragaria x ananassa HOM05D000915 ORTHO05D001662 7.6e-07 57.4 41 63.4
FAN13G1999 Fragaria x ananassa HOM05D000915 ORTHO05D001662 7.6e-07 57.4 41 63.4
FAN18G3154 Fragaria x ananassa HOM05D000915 ORTHO05D001662 7.6e-07 57.4 41 63.4
FAN18G3383 Fragaria x ananassa HOM05D000915 ORTHO05D001662 7.6e-07 57.4 41 63.4
Prupe.5G177300 Prunus persica HOM05D000915 ORTHO05D001662 7.6e-07 57.4 41 63.4
RcHm_v2.0_Chr7g0194051 Rosa chinensis HOM05D000915 ORTHO05D001662 7.6e-07 57.4 41 63.4
Sed0005962 Sechium edule HOM05D000915 ORTHO05D001662 7.6e-07 57.4 41 65.9
TWI81G0842 Tripterygium wilfordii HOM05D000915 ORTHO05D001662 7.6e-07 57.4 41 63.4
vmacro19368 Vaccinium macrocarpon HOM05D000915 ORTHO05D001662 7.6e-07 57.4 41 65.9
Lalb_Chr07g0182631 Lupinus albus HOM05D000915 ORTHO05D001662 9.9e-07 57.0 41 63.4
MD14G1184600 Malus domestica HOM05D000915 ORTHO05D001662 9.9e-07 57.0 41 63.4
MSTRG.23106 Avicennia marina HOM05D000915 ORTHO05D001662 1.3e-06 56.6 41 63.4
Migut.I00035 Erythranthe guttata HOM05D000915 ORTHO05D001662 1.3e-06 56.6 41 63.4
Eucgr.I01831 Eucalyptus grandis HOM05D000915 ORTHO05D001662 1.3e-06 56.6 41 65.9
FAN08G0612 Fragaria x ananassa HOM05D000915 ORTHO05D001662 1.3e-06 56.6 41 63.4
Manes.14G068600 Manihot esculenta HOM05D000915 ORTHO05D001662 1.3e-06 56.6 41 63.4
QL10p013502 Quercus lobata HOM05D000915 ORTHO05D001662 1.3e-06 56.6 41 63.4
SGA_v2.0_scaffold25G10875 Striga asiatica HOM05D000915 ORTHO05D001662 1.3e-06 56.6 41 63.4
CAN.G29.8 Capsicum annuum HOM05D000915 ORTHO05D001662 1.7e-06 56.2 41 63.4
Migut.D01778 Erythranthe guttata HOM05D000915 ORTHO05D001662 1.7e-06 56.2 41 63.4
Nitab4.5_0000025g0620 Nicotiana tabacum HOM05D000915 ORTHO05D001662 1.7e-06 56.2 41 63.4
Nitab4.5_0001724g0090 Nicotiana tabacum HOM05D000915 ORTHO05D001662 1.7e-06 56.2 41 63.4
Peaxi162Scf00496g00075 Petunia axillaris HOM05D000915 ORTHO05D001662 1.7e-06 56.2 41 63.4
PGSC0003DMG402019374 Solanum tuberosum HOM05D000915 ORTHO05D001662 1.7e-06 56.2 41 63.4
Hma1.2p1_0176F.1_g077780 Hydrangea macrophylla HOM05D000915 ORTHO05D001662 2.2e-06 55.8 41 63.4
Lj9A451G97 Lonicera japonica HOM05D000915 ORTHO05D001662 2.2e-06 55.8 41 63.4
MD06G1178100 Malus domestica HOM05D000915 ORTHO05D001662 2.2e-06 55.8 41 61.0
Potri.012G077900 Populus trichocarpa HOM05D000915 ORTHO05D001662 2.2e-06 55.8 41 61.0
Potri.015G073100 Populus trichocarpa HOM05D000915 ORTHO05D001662 2.2e-06 55.8 41 61.0
arahy.Tifrunner.gnm1.ann1.IU518F Arachis hypogaea HOM05D000915 ORTHO05D001662 2.9e-06 55.5 43 60.5
arahy.Tifrunner.gnm1.ann1.J64BKK Arachis hypogaea HOM05D000915 ORTHO05D084760 2.9e-06 55.5 40 72.5
Lsat_1_v5_gn_5_17020 Lactuca sativa HOM05D000915 ORTHO05D001662 2.9e-06 55.5 41 61.0
Sabra15G0097300 Salix brachista HOM05D000915 ORTHO05D001662 2.9e-06 55.5 41 61.0
unitig_749.g13470 Utricularia gibba HOM05D000915 ORTHO05D001662 2.9e-06 55.5 41 61.0
arahy.Tifrunner.gnm1.ann1.HF93XK Arachis hypogaea HOM05D000915 ORTHO05D001662 3.8e-06 55.1 36 69.4
TWI15G1135 Tripterygium wilfordii HOM05D000915 ORTHO05D001662 3.8e-06 55.1 41 61.0
EL10Ac5g10805 Beta vulgaris HOM05D000915 ORTHO05D001662 4.9e-06 54.7 37 64.9
Lalb_Chr13g0297911 Lupinus albus HOM05D000915 ORTHO05D001662 4.9e-06 54.7 41 61.0
FAN06G3265 Fragaria x ananassa HOM05D000915 ORTHO05D011770 6.4e-06 54.3 40 62.5
Mapoly0024s0090 Marchantia polymorpha HOM05D000915 ORTHO05D001662 8.4e-06 53.9 40 62.5
Pp3c8_7470 Physcomitrium patens HOM05D000915 ORTHO05D001662 8.4e-06 53.9 41 56.1
Sabra12G0055700 Salix brachista HOM05D000915 ORTHO05D001662 8.4e-06 53.9 41 58.5
SGA_v2.0_scaffold1610G53998 Striga asiatica HOM05D000915 ORTHO05D001662 8.4e-06 53.9 41 58.5
unitig_26.g9627 Utricularia gibba HOM05D000915 ORTHO05D001662 8.4e-06 53.9 41 58.5


User provided reference genes

Program Settings