Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 1.7e-161 572.8 332 100.0
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 6.2e-151 537.7 332 94.0
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 3.8e-108 395.6 332 71.1
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 9.3e-107 391.0 327 72.5
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 6.1e-106 388.3 332 70.5
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 2.3e-105 386.3 327 66.7
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 1.7e-103 380.2 330 70.0
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 2.2e-103 379.8 326 70.2
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 6.3e-103 378.3 327 66.7
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 3.4e-101 372.5 327 68.5
CiPaw.01G101200 Carya illinoinensis HOM05D005795 ORTHO05D007200 7.7e-101 371.3 328 68.3
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 1.3e-100 370.5 329 69.9
VMungo1080G0355 Vigna mungo HOM05D005795 ORTHO05D007200 2.9e-100 369.4 335 66.3
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 6.5e-100 368.2 331 70.7
ClCG07G015610 Citrullus lanatus HOM05D005795 ORTHO05D007200 8.5e-100 367.9 327 68.5
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 2.5e-99 366.3 327 65.4
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 9.4e-99 364.4 328 69.5
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 9.4e-99 364.4 323 69.7
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 1.6e-98 363.6 329 67.5
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 2.7e-98 362.8 326 66.9
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 3.6e-98 362.5 323 67.2
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 6.1e-98 361.7 326 66.9
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 7.9e-98 361.3 325 60.6
arahy.Tifrunner.gnm1.ann1.LQCR4Y Arachis hypogaea HOM05D005795 ORTHO05D007200 1.4e-97 360.5 324 64.2
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 1.8e-97 360.1 327 66.7
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 1.8e-97 360.1 326 66.6
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 3.9e-97 359.0 327 67.0
Lalb_Chr22g0352181 Lupinus albus HOM05D005795 ORTHO05D007200 3.9e-97 359.0 324 66.4
Aqoxy2G04090 Aquilegia oxysepala HOM05D005795 ORTHO05D007200 2.0e-96 356.7 326 66.9
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 2.0e-96 356.7 326 65.3
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 2.6e-96 356.3 327 64.8
Glyma.15G030700 Glycine max HOM05D005795 ORTHO05D007200 2.6e-96 356.3 337 62.9
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 1.7e-95 353.6 323 65.0
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 1.1e-94 350.9 320 66.2
SalBow3G4461 Salvia bowleyana HOM05D005795 ORTHO05D007200 1.4e-94 350.5 326 66.3
THA.LOC104803670 Tarenaya hassleriana HOM05D005795 ORTHO05D007200 2.4e-94 349.7 327 65.4
Aa31LG10G13730 Aethionema arabicum HOM05D005795 ORTHO05D007200 3.1e-94 349.4 328 66.5
AL5G41280 Arabidopsis lyrata HOM05D005795 ORTHO05D007200 3.1e-94 349.4 327 67.3
EL10Ac3g05921 Beta vulgaris HOM05D005795 ORTHO05D007200 4.1e-94 349.0 327 67.6
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 4.1e-94 349.0 322 65.8
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 5.3e-94 348.6 322 67.1
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 9.1e-94 347.8 320 67.2
CARHR169760 Cardamine hirsuta HOM05D005795 ORTHO05D007200 1.5e-93 347.1 327 66.4
Glyma.13G343600 Glycine max HOM05D005795 ORTHO05D007200 3.4e-93 345.9 357 56.0
Medtr2g098650 Medicago truncatula HOM05D005795 ORTHO05D007200 7.7e-93 344.7 324 63.6
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 1.0e-92 344.4 327 60.9
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 2.2e-92 343.2 327 66.1
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 6.5e-92 341.7 332 65.1
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 6.5e-92 341.7 355 58.6
Sed0015939 Sechium edule HOM05D005795 ORTHO05D007200 6.5e-92 341.7 327 63.6
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 1.9e-91 340.1 326 65.0
PGR083G1909 Punica granatum HOM05D005795 ORTHO05D007200 4.2e-91 339.0 326 66.0
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 5.5e-91 338.6 327 67.0
Lj6A56T30 Lonicera japonica HOM05D005795 ORTHO05D007200 1.2e-90 337.4 330 65.5
RcHm_v2.0_Chr4g0407031 Rosa chinensis HOM05D005795 ORTHO05D007200 2.1e-90 336.7 322 65.8
Carub.0005s2612 Capsella rubella HOM05D005795 ORTHO05D007200 2.7e-90 336.3 327 65.1
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 4.7e-90 335.5 350 51.1
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 1.0e-89 334.3 355 57.7
FAN07G0438 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.8e-89 333.6 324 64.2
HanXRQChr07g0186111 Helianthus annuus HOM05D005795 ORTHO05D007200 6.7e-89 331.6 331 59.2
FvH4_4g10680 Fragaria vesca HOM05D005795 ORTHO05D007200 1.5e-88 330.5 324 64.2
Cpa.g.sc41.30 Carica papaya HOM05D005795 ORTHO05D007200 2.0e-88 330.1 323 65.3
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 3.3e-88 329.3 325 64.3
QL10p048508 Quercus lobata HOM05D005795 ORTHO05D007200 1.3e-87 327.4 329 62.6
Solyc06g073390.3 Solanum lycopersicum HOM05D005795 ORTHO05D007200 1.7e-87 327.0 334 64.1
Sopen06g029770 Solanum pennellii HOM05D005795 ORTHO05D007200 1.7e-87 327.0 334 64.1
Phvul.005G152400 Phaseolus vulgaris HOM05D005795 ORTHO05D007200 3.7e-87 325.9 335 59.7
AUR62002291 Chenopodium quinoa HOM05D005795 ORTHO05D007200 8.2e-87 324.7 327 64.2
DCAR_003909 Daucus carota HOM05D005795 ORTHO05D007200 8.2e-87 324.7 325 59.1
GSVIVG01010747001 Vitis vinifera HOM05D005795 ORTHO05D007200 8.2e-87 324.7 329 63.2
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 1.1e-86 324.3 310 65.5
AUR62015400 Chenopodium quinoa HOM05D005795 ORTHO05D007200 9.1e-86 321.2 327 61.8
Hund03150 Selenicereus undatus HOM05D005795 ORTHO05D007200 2.6e-85 319.7 327 59.3
SGA_v2.0_scaffold375G50253 Striga asiatica HOM05D005795 ORTHO05D007200 4.5e-85 318.9 326 62.9
Atru.chr3.1532 Acer truncatum HOM05D005795 ORTHO05D007200 5.9e-85 318.5 326 61.3
Atru.chr3.1535 Acer truncatum HOM05D005795 ORTHO05D007200 5.9e-85 318.5 326 61.3
PGSC0003DMG400027009 Solanum tuberosum HOM05D005795 ORTHO05D007200 5.9e-85 318.5 320 64.1
SGA_v2.0_scaffold136G34981 Striga asiatica HOM05D005795 ORTHO05D007200 5.9e-85 318.5 326 61.7
TPR.G18871 Trifolium pratense HOM05D005795 ORTHO05D007200 1.0e-84 317.8 324 60.8
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 3.8e-84 315.8 316 64.6
Prupe.1G191500 Prunus persica HOM05D005795 ORTHO05D007200 2.3e-81 306.6 326 60.4
Potri.007G127500 Populus trichocarpa HOM05D005795 ORTHO05D007200 5.2e-81 305.4 327 59.3
BcaC09g50250 Brassica carinata HOM05D005795 ORTHO05D007200 1.2e-80 304.3 302 67.5
unitig_22.g5744 Utricularia gibba HOM05D005795 ORTHO05D007200 7.5e-80 301.6 334 58.7
MD04G1007300 Malus domestica HOM05D005795 ORTHO05D007200 2.8e-79 299.7 326 60.4
Migut.G00958 Erythranthe guttata HOM05D005795 ORTHO05D007200 4.8e-79 298.9 322 60.9
A01p22030 Brassica napus HOM05D005795 ORTHO05D007200 1.6e-77 293.9 327 61.8
BraA01t02109Z Brassica rapa HOM05D005795 ORTHO05D007200 1.6e-77 293.9 327 61.8
Sp7g13790 Schrenkiella parvula HOM05D005795 ORTHO05D007200 1.0e-76 291.2 321 57.6
Ah.13g072920 Amaranthus hybridus HOM05D005795 ORTHO05D007200 2.9e-76 289.7 327 51.1
CDE08G0443 Ceratophyllum demersum HOM05D005795 ORTHO05D007200 3.8e-76 289.3 325 59.4
BcaNung00265 Brassica carinata HOM05D005795 ORTHO05D007200 5.5e-75 285.4 327 59.6
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 1.4e-73 280.8 335 46.3
CAN.G65.180 Capsicum annuum HOM05D005795 ORTHO05D007200 8.3e-71 271.6 286 61.5
Pp3c9_24240 Physcomitrium patens HOM05D005795 ORTHO05D007200 9.1e-70 268.1 311 57.2
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 1.7e-68 263.8 167 73.1
Hma1.2p1_0754F.1_g213060 Hydrangea macrophylla HOM05D005795 ORTHO05D007200 8.9e-65 251.5 172 68.0
SMO137G0277 Selaginella moellendorffii HOM05D005795 ORTHO05D007200 3.7e-63 246.1 328 52.7
Mapoly0093s0047 Marchantia polymorpha HOM05D005795 ORTHO05D007200 4.1e-62 242.7 318 55.0
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 2.5e-59 233.4 264 46.6
Nitab4.5_0005570g0030 Nicotiana tabacum HOM05D005795 ORTHO05D007200 1.2e-56 224.6 171 62.6
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 1.2e-56 224.6 167 59.9
BcaC06g33415 Brassica carinata HOM05D005795 ORTHO05D007200 5.8e-56 222.2 319 45.5
Cc05_g03950 Coffea canephora HOM05D005795 ORTHO05D007200 3.7e-55 219.5 169 60.4
FAN12G2789 Fragaria x ananassa HOM05D005795 ORTHO05D007200 2.4e-54 216.9 164 60.4
FAN12G0695 Fragaria x ananassa HOM05D005795 ORTHO05D007200 7.8e-53 211.8 159 61.0
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.0e-52 211.5 171 58.5
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 5.6e-51 205.7 191 52.9
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.4e-49 201.1 168 56.5
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 2.7e-45 186.8 167 52.7
BolC1t02678H Brassica oleracea HOM05D005795 ORTHO05D000108 4.6e-45 186.0 167 55.1
FAN17G0508 Fragaria x ananassa HOM05D005795 ORTHO05D007200 6.0e-37 159.1 181 46.4
BcaC06g32941 Brassica carinata HOM05D005795 ORTHO05D007200 3.9e-36 156.4 167 47.9
AagrBONN_evm.TU.Sc2ySwM_228.2319 Anthoceros agrestis HOM05D005795 ORTHO05D007200 2.5e-35 153.7 214 57.9
MCO13G170 Micromonas commoda HOM05D005795 ORTHO05D007200 3.4e-32 143.3 252 33.3
CBR_g21757 Chara braunii HOM05D005795 ORTHO05D007200 9.9e-32 141.7 340 37.1
AagrBONN_evm.TU.Sc2ySwM_117.2773 Anthoceros agrestis HOM05D005795 ORTHO05D007200 2.3e-28 130.6 176 38.6
Eucgr.L02278 Eucalyptus grandis HOM05D005795 ORTHO05D007200 8.7e-28 128.6 96 62.5
TAR633G0840 Trochodendron aralioides HOM05D005795 ORTHO05D007200 3.3e-27 126.7 78 76.9
Duzib151G0649 Durio zibethinus HOM05D005795 ORTHO05D007200 1.6e-26 124.4 95 61.1
Haze_01530 Corylus avellana HOM05D005795 ORTHO05D007200 2.6e-24 117.1 82 67.1
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 3.8e-23 113.2 335 27.8
Cre01.g016950 Chlamydomonas reinhardtii HOM05D005795 ORTHO05D007200 4.9e-23 112.8 261 47.1
SHI30240 Sapria himalayana HOM05D005795 ORTHO05D007200 2.5e-19 100.5 84 60.7
A05p02150 Brassica napus HOM05D005795 ORTHO05D007200 1.4e-17 94.7 60 71.7
PSO648G0124 Papaver somniferum HOM05D005795 ORTHO05D007200 2.9e-15 87.0 48 81.2
Cpa.g.sc41.23 Carica papaya HOM05D005795 ORTHO05D007200 4.9e-15 86.3 60 61.7
Cpa.g.sc41.24 Carica papaya HOM05D005795 ORTHO05D007200 2.1e-10 70.9 127 33.1
PSO063G4587 Papaver somniferum HOM05D005795 ORTHO05D007200 4.8e-10 69.7 56 62.5
Gohir.A10G135766 Gossypium hirsutum HOM05D005795 ORTHO05D007200 1.5e-08 64.7 54 53.7
SGA_v2.0_scaffold44G16637 Striga asiatica HOM05D005795 ORTHO05D007200 2.2e-07 60.8 126 34.9
PRCOL_00002257 Prasinoderma coloniale HOM05D005795 ORTHO05D007200 1.4e-06 58.2 283 30.0


User provided reference genes

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