Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO732G0121 Papaver somniferum HOM05D007072 ORTHO05D008841 9.3e-119 430.3 223 100.0
PSO675G2050 Papaver somniferum HOM05D007072 ORTHO05D008841 1.7e-96 356.3 209 90.4
Nn4g26321 Nelumbo nucifera HOM05D007072 ORTHO05D008841 4.1e-58 228.8 216 61.6
Aqoxy5G00468 Aquilegia oxysepala HOM05D007072 ORTHO05D008841 7.3e-55 218.0 214 60.3
TAR636G0958 Trochodendron aralioides HOM05D007072 ORTHO05D008841 7.3e-55 218.0 205 61.0
Haze_00902 Corylus avellana HOM05D007072 ORTHO05D008841 8.1e-54 214.5 196 61.7
QL06p002505 Quercus lobata HOM05D007072 ORTHO05D008841 8.9e-53 211.1 193 61.1
Haze_03895 Corylus avellana HOM05D007072 ORTHO05D008841 1.5e-52 210.3 196 60.7
COL.COLO4_04736 Corchorus olitorius HOM05D007072 ORTHO05D008841 5.8e-52 208.4 200 58.0
Dinv13993 Davidia involucrata HOM05D007072 ORTHO05D008841 7.5e-52 208.0 199 58.3
Prupe.1G013400 Prunus persica HOM05D007072 ORTHO05D008841 7.5e-52 208.0 196 59.2
Atru.ctg752_3.79 Acer truncatum HOM05D007072 ORTHO05D008841 4.9e-51 205.3 194 59.3
Eucgr.L01273 Eucalyptus grandis HOM05D007072 ORTHO05D008841 4.9e-51 205.3 191 59.2
GSVIVG01017974001 Vitis vinifera HOM05D007072 ORTHO05D008841 6.4e-51 204.9 191 59.7
CSS0014065 Camellia sinensis var. sinensis HOM05D007072 ORTHO05D008841 1.4e-50 203.8 199 55.8
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 1.4e-50 203.8 168 65.5
Duzib212G0309 Durio zibethinus HOM05D007072 ORTHO05D008841 1.9e-50 203.4 200 57.5
Thecc.04G231900 Theobroma cacao HOM05D007072 ORTHO05D008841 2.4e-50 203.0 206 57.3
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 3.2e-50 202.6 168 64.9
CiPaw.01G165800 Carya illinoinensis HOM05D007072 ORTHO05D008841 5.4e-50 201.8 196 59.2
Eucgr.L02492 Eucalyptus grandis HOM05D007072 ORTHO05D008841 1.2e-49 200.7 189 58.7
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 1.2e-49 200.7 168 64.9
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 1.6e-49 200.3 187 58.8
MD16G1193700 Malus domestica HOM05D007072 ORTHO05D008841 1.6e-49 200.3 197 55.8
Rhsim04G0202300 Rhododendron simsii HOM05D007072 ORTHO05D008841 1.6e-49 200.3 194 58.2
Ca_10901_v3 Cicer arietinum L. HOM05D007072 ORTHO05D008841 2.1e-49 199.9 189 60.3
CANSAT78G1446 Cannabis sativa HOM05D007072 ORTHO05D008841 3.5e-49 199.1 177 60.5
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 6.0e-49 198.4 182 62.1
Potri.008G152800 Populus trichocarpa HOM05D007072 ORTHO05D008841 7.8e-49 198.0 194 58.2
arahy.Tifrunner.gnm1.ann1.KKZ0LN Arachis hypogaea HOM05D007072 ORTHO05D008841 1.7e-48 196.8 190 60.5
PGR142G1968 Punica granatum HOM05D007072 ORTHO05D008841 2.3e-48 196.4 189 57.1
CAN.G490.4 Capsicum annuum HOM05D007072 ORTHO05D008841 5.1e-48 195.3 196 58.2
Sopen09g030860 Solanum pennellii HOM05D007072 ORTHO05D008841 6.6e-48 194.9 196 58.2
Oeu031231.1 Olea europaea HOM05D007072 ORTHO05D008841 8.6e-48 194.5 176 60.2
Solyc09g076030.4 Solanum lycopersicum HOM05D007072 ORTHO05D008841 8.6e-48 194.5 196 58.2
MELO3C012648.2 Cucumis melo HOM05D007072 ORTHO05D008841 1.1e-47 194.1 207 55.1
Medtr1g103810 Medicago truncatula HOM05D007072 ORTHO05D008841 1.1e-47 194.1 199 56.8
arahy.Tifrunner.gnm1.ann1.8ZA7N6 Arachis hypogaea HOM05D007072 ORTHO05D008841 1.5e-47 193.7 187 59.9
CsaV3_7G022520 Cucumis sativus L. HOM05D007072 ORTHO05D008841 1.5e-47 193.7 185 59.5
Glyma.07G018200 Glycine max HOM05D007072 ORTHO05D008841 1.5e-47 193.7 189 58.7
ClCG06G006220 Citrullus lanatus HOM05D007072 ORTHO05D008841 2.5e-47 193.0 188 59.0
Sc19g0004160 Simmondsia chinensis HOM05D007072 ORTHO05D008841 2.5e-47 193.0 193 57.0
Migut.G00337 Erythranthe guttata HOM05D007072 ORTHO05D008841 3.3e-47 192.6 179 62.0
PGSC0003DMG400030078 Solanum tuberosum HOM05D007072 ORTHO05D008841 3.3e-47 192.6 196 57.7
Glyma.08G203200 Glycine max HOM05D007072 ORTHO05D008841 4.3e-47 192.2 189 58.2
RcHm_v2.0_Chr4g0416241 Rosa chinensis HOM05D007072 ORTHO05D008841 4.3e-47 192.2 199 54.8
TPR.G5523 Trifolium pratense HOM05D007072 ORTHO05D008841 4.3e-47 192.2 189 58.2
arahy.Tifrunner.gnm1.ann1.0J3LZT Arachis hypogaea HOM05D007072 ORTHO05D008841 5.6e-47 191.8 190 59.5
Sabra08G0116400 Salix brachista HOM05D007072 ORTHO05D008841 5.6e-47 191.8 221 51.1
Actinidia40146 Actinidia chinensis HOM05D007072 ORTHO05D008841 7.3e-47 191.4 185 58.4
Lj5g0010864 Lotus japonicus HOM05D007072 ORTHO05D008841 9.5e-47 191.0 188 59.6
Sed0002009 Sechium edule HOM05D007072 ORTHO05D008841 1.2e-46 190.7 189 60.8
Manes.03G178700 Manihot esculenta HOM05D007072 ORTHO05D008841 3.6e-46 189.1 151 67.5
Psat6g207520 Pisum sativum HOM05D007072 ORTHO05D008841 3.6e-46 189.1 187 58.3
SalBow2G0955 Salvia bowleyana HOM05D007072 ORTHO05D008841 3.6e-46 189.1 187 61.0
Thhalv10008840m.g Eutrema salsugineum HOM05D007072 ORTHO05D008841 4.7e-46 188.7 205 56.6
Peaxi162Scf00092g01012 Petunia axillaris HOM05D007072 ORTHO05D008841 4.7e-46 188.7 184 58.2
BcaB02g06864 Brassica carinata HOM05D007072 ORTHO05D008841 6.2e-46 188.3 175 61.7
Sp1g04270 Schrenkiella parvula HOM05D007072 ORTHO05D008841 6.2e-46 188.3 202 54.5
DCAR_030636 Daucus carota HOM05D007072 ORTHO05D008841 8.1e-46 188.0 168 60.7
Phvul.007G057300 Phaseolus vulgaris HOM05D007072 ORTHO05D008841 1.4e-45 187.2 189 57.7
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 3.1e-45 186.0 206 55.3
THA.LOC104800963 Tarenaya hassleriana HOM05D007072 ORTHO05D008841 3.1e-45 186.0 165 62.4
Aa31LG1G19230 Aethionema arabicum HOM05D007072 ORTHO05D008841 4.0e-45 185.7 212 50.9
C05p03740 Brassica napus HOM05D007072 ORTHO05D008841 4.0e-45 185.7 206 54.9
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 4.0e-45 185.7 206 55.8
VMungo0720G2696 Vigna mungo HOM05D007072 ORTHO05D008841 4.0e-45 185.7 190 57.4
Cc03_g03760 Coffea canephora HOM05D007072 ORTHO05D008841 8.9e-45 184.5 168 57.7
ATR0733G024 Amborella trichopoda HOM05D007072 ORTHO05D008841 1.5e-44 183.7 192 54.7
Hma1.2p1_1344F.1_g277130 Hydrangea macrophylla HOM05D007072 ORTHO05D008841 2.0e-44 183.3 200 52.0
arahy.Tifrunner.gnm1.ann1.DZ7G8Z Arachis hypogaea HOM05D007072 ORTHO05D008841 2.6e-44 183.0 208 53.8
TWI09G0189 Tripterygium wilfordii HOM05D007072 ORTHO05D008841 2.6e-44 183.0 169 60.9
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 3.4e-44 182.6 206 55.3
Hund12130 Selenicereus undatus HOM05D007072 ORTHO05D008841 4.4e-44 182.2 161 60.2
ECA240G2950 Erigeron canadensis HOM05D007072 ORTHO05D008841 5.8e-44 181.8 208 52.4
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 5.8e-44 181.8 199 52.8
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 5.8e-44 181.8 199 52.8
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 2.2e-43 179.9 199 52.3
Ah.04g154560 Amaranthus hybridus HOM05D007072 ORTHO05D008841 2.9e-43 179.5 140 64.3
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 4.9e-43 178.7 168 59.5
AL1G15220 Arabidopsis lyrata HOM05D007072 ORTHO05D008841 6.4e-43 178.3 124 71.8
Lalb_Chr02g0140581 Lupinus albus HOM05D007072 ORTHO05D008841 6.4e-43 178.3 147 66.7
AT1G05385 Arabidopsis thaliana HOM05D007072 ORTHO05D008841 1.4e-42 177.2 132 68.2
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 1.9e-42 176.8 161 59.6
HanXRQChr03g0062521 Helianthus annuus HOM05D007072 ORTHO05D008841 1.9e-42 176.8 189 54.5
AUR62034750 Chenopodium quinoa HOM05D007072 ORTHO05D008841 3.2e-42 176.0 171 57.9
EL10Ac2g03959 Beta vulgaris HOM05D007072 ORTHO05D008841 5.4e-42 175.3 174 55.7
Lj3A735T48 Lonicera japonica HOM05D007072 ORTHO05D008841 1.2e-41 174.1 208 51.9
Rhsim04G0202400 Rhododendron simsii HOM05D007072 ORTHO05D008841 1.2e-41 174.1 133 66.2
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 2.1e-41 173.3 161 58.4
Zm00001eb214960 Zea mays HOM05D007072 ORTHO05D008841 2.1e-41 173.3 167 60.5
EL10Ac4g08230 Beta vulgaris HOM05D007072 ORTHO05D008841 3.5e-41 172.6 174 55.2
CARHR004900 Cardamine hirsuta HOM05D007072 ORTHO05D008841 4.6e-41 172.2 168 60.1
SGA_v2.0_scaffold124G33503 Striga asiatica HOM05D007072 ORTHO05D008841 1.7e-40 170.2 165 58.8
Lsat_1_v5_gn_7_66201 Lactuca sativa HOM05D007072 ORTHO05D008841 3.0e-40 169.5 189 53.4
AUR62033624 Chenopodium quinoa HOM05D007072 ORTHO05D008841 1.5e-39 167.2 139 62.6
Os03g0747700 Oryza sativa ssp. japonica HOM05D007072 ORTHO05D008841 8.1e-38 161.4 125 68.8
HPP92_001955 Vanilla planifolia HOM05D007072 ORTHO05D008841 1.3e-35 154.1 116 68.1
Actinidia27161 Actinidia chinensis HOM05D007072 ORTHO05D008841 2.1e-33 146.7 196 47.4
Mapoly0045s0091 Marchantia polymorpha HOM05D007072 ORTHO05D008841 7.3e-31 138.3 140 53.6
CDE10G0502 Ceratophyllum demersum HOM05D007072 ORTHO05D008841 1.3e-30 137.5 100 69.0
Pp3c8_18010 Physcomitrium patens HOM05D007072 ORTHO05D008841 1.3e-30 137.5 131 53.4
Nitab4.5_0001560g0030 Nicotiana tabacum HOM05D007072 ORTHO05D008841 4.8e-30 135.6 142 57.0
SMO347G0486 Selaginella moellendorffii HOM05D007072 ORTHO05D008841 6.9e-29 131.7 140 48.6
SEGI_01006 Sequoiadendron giganteum HOM05D007072 ORTHO05D008841 3.2e-26 122.9 157 46.5
CBR_g41625 Chara braunii HOM05D007072 ORTHO05D008841 2.1e-25 120.2 119 50.4
RcHm_v2.0_Chr4g0430981 Rosa chinensis HOM05D007072 ORTHO05D008841 1.8e-21 107.1 108 55.6
MBI05_g43294_MAGBIO Magnolia biondii HOM05D007072 ORTHO05D008841 7.6e-20 101.7 69 72.5
AagrBONN_evm.TU.Sc2ySwM_228.1232 Anthoceros agrestis HOM05D007072 ORTHO05D008841 3.1e-13 79.7 77 53.2


User provided reference genes

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