Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO732G0094 Papaver somniferum HOM05D008403 ORTHO05D010317 7.6e-98 360.5 186 100.0
PSO732G0092 Papaver somniferum HOM05D008403 ORTHO05D010317 1.9e-85 319.3 184 88.6
PSO732G0418 Papaver somniferum HOM05D008403 ORTHO05D010317 5.5e-80 301.2 184 84.8
PSO732G0610 Papaver somniferum HOM05D008403 ORTHO05D010317 2.3e-70 269.2 168 83.3
PSO675G0961 Papaver somniferum HOM05D008403 ORTHO05D010317 1.7e-65 253.1 186 74.7
PSO675G4416 Papaver somniferum HOM05D008403 ORTHO05D010317 2.0e-61 239.6 198 69.2
PSO541G3674 Papaver somniferum HOM05D008403 ORTHO05D010317 4.2e-56 221.9 167 73.1
PSO732G0597 Papaver somniferum HOM05D008403 ORTHO05D010317 9.7e-53 210.7 161 72.0
Duzib268G1784 Durio zibethinus HOM05D008403 ORTHO05D010317 1.6e-18 97.1 177 40.1
Lj6g0020324 Lotus japonicus HOM05D008403 ORTHO05D010317 1.6e-18 97.1 177 36.2
Rhsim02G0087900 Rhododendron simsii HOM05D008403 ORTHO05D010317 2.0e-18 96.7 162 39.5
QL05p066264 Quercus lobata HOM05D008403 ORTHO05D010317 1.0e-17 94.4 181 39.2
COL.COLO4_27522 Corchorus olitorius HOM05D008403 ORTHO05D010317 1.7e-17 93.6 179 38.0
RcHm_v2.0_Chr5g0000141 Rosa chinensis HOM05D008403 ORTHO05D010317 2.9e-17 92.8 177 38.4
CiPaw.09G112600 Carya illinoinensis HOM05D008403 ORTHO05D010317 1.9e-16 90.1 170 38.8
PGR004G1501 Punica granatum HOM05D008403 ORTHO05D010317 2.5e-16 89.7 180 33.3
Atru.chr1.2232 Acer truncatum HOM05D008403 ORTHO05D010317 3.3e-16 89.4 182 38.5
CiPaw.08G030100 Carya illinoinensis HOM05D008403 ORTHO05D010317 3.3e-16 89.4 177 37.3
Atru.chr2.423 Acer truncatum HOM05D008403 ORTHO05D010317 4.3e-16 89.0 187 37.4
Aqoxy4G02379 Aquilegia oxysepala HOM05D008403 ORTHO05D010317 5.6e-16 88.6 175 37.7
Prupe.4G001200 Prunus persica HOM05D008403 ORTHO05D010317 7.3e-16 88.2 170 35.9
CANSAT56G1928 Cannabis sativa HOM05D008403 ORTHO05D010317 9.5e-16 87.8 158 38.6
PGR004G1348 Punica granatum HOM05D008403 ORTHO05D010317 9.5e-16 87.8 165 33.9
FvH4_3g00110 Fragaria vesca HOM05D008403 ORTHO05D010317 1.2e-15 87.4 178 38.2
Lalb_Chr20g0119681 Lupinus albus HOM05D008403 ORTHO05D010317 3.6e-15 85.9 175 35.4
Cpa.g.sc27.190 Carica papaya HOM05D008403 ORTHO05D010317 8.0e-15 84.7 177 37.3
Potri.008G013400 Populus trichocarpa HOM05D008403 ORTHO05D010317 8.0e-15 84.7 178 36.0
CSS0029866 Camellia sinensis var. sinensis HOM05D008403 ORTHO05D010317 1.0e-14 84.3 183 34.4
FAN25G0691 Fragaria x ananassa HOM05D000186 ORTHO05D001124 2.3e-14 83.2 175 37.1
TWI31G1421 Tripterygium wilfordii HOM05D008403 ORTHO05D010317 3.1e-14 82.8 180 36.7
Sabra08G0008100 Salix brachista HOM05D008403 ORTHO05D010317 4.0e-14 82.4 177 36.2
TAR627G0716 Trochodendron aralioides HOM05D008403 ORTHO05D010317 4.0e-14 82.4 158 38.0
Atru.chr2.427 Acer truncatum HOM05D008403 ORTHO05D010317 8.9e-14 81.3 187 34.8
Atru.chr2.1377 Acer truncatum HOM05D008403 ORTHO05D010317 2.6e-13 79.7 150 38.7
Oeu016936.1 Olea europaea HOM05D008403 ORTHO05D010317 4.4e-13 79.0 177 33.9
QL05p066293 Quercus lobata HOM05D008403 ORTHO05D010317 7.5e-13 78.2 177 34.5
Ciclev10017450m.g Citrus clementina HOM05D008403 ORTHO05D010317 1.3e-12 77.4 118 43.2
Eucgr.D00968 Eucalyptus grandis HOM05D008403 ORTHO05D010317 6.4e-12 75.1 177 34.5
Manes.08G015200 Manihot esculenta HOM05D008403 ORTHO05D010317 2.4e-11 73.2 177 32.2
Actinidia04549 Actinidia chinensis HOM05D008403 ORTHO05D010317 4.1e-11 72.4 167 34.7
Carub.0008s2541 Capsella rubella HOM05D004113 ORTHO05D005233 2.7e-10 69.7 181 28.7
Ciclev10003770m.g Citrus clementina HOM05D004894 ORTHO05D005689 2.7e-10 69.7 152 35.5
Rhsim02G0088000 Rhododendron simsii HOM05D008403 ORTHO05D010317 1.0e-09 67.8 186 31.7
Actinidia21437 Actinidia chinensis HOM05D003556 ORTHO05D003404 1.3e-09 67.4 146 29.5
Migut.F01664 Erythranthe guttata HOM05D008403 ORTHO05D010317 3.9e-09 65.9 149 34.9
MBI09_g02146_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 5.0e-09 65.5 170 31.8
Oeu017922.1 Olea europaea HOM05D008403 ORTHO05D010317 4.3e-08 62.4 121 33.9
MBI09_g40718_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 5.6e-08 62.0 170 30.0
SGA_v2.0_scaffold186G40153 Striga asiatica HOM05D008403 ORTHO05D010317 5.6e-08 62.0 144 33.3
MBI18_g04557_MAGBIO Magnolia biondii HOM05D008403 ORTHO05D010317 1.2e-07 60.8 153 32.7
Oeu002789.2 Olea europaea HOM05D008403 ORTHO05D010317 1.2e-07 60.8 136 30.1
Haze_17791 Corylus avellana HOM05D004894 ORTHO05D009560 4.7e-07 58.9 140 29.3
Lj6g0019770 Lotus japonicus HOM05D000001 ORTHO05D010775 4.7e-07 58.9 76 40.8
Migut.M01476 Erythranthe guttata HOM05D008403 ORTHO05D010317 6.2e-07 58.5 180 31.1
Lalb_Chr02g0146451 Lupinus albus HOM05D003556 ORTHO05D003404 1.8e-06 57.0 174 29.3
QL02p037589 Quercus lobata HOM05D004894 ORTHO05D005689 1.8e-06 57.0 182 28.6
SGA_v2.0_scaffold7G03659 Striga asiatica HOM05D008403 ORTHO05D010317 1.8e-06 57.0 149 31.5
Ciclev10003123m.g Citrus clementina HOM05D004894 ORTHO05D005689 3.1e-06 56.2 157 31.2
MBI09_g01820_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 3.1e-06 56.2 170 28.2
Nn1g08310 Nelumbo nucifera HOM05D008403 ORTHO05D010317 3.1e-06 56.2 154 28.6
QL02p038558 Quercus lobata HOM05D004894 ORTHO05D005689 6.8e-06 55.1 165 28.5
RcHm_v2.0_Chr2g0120401 Rosa chinensis HOM05D004113 ORTHO05D005233 6.8e-06 55.1 184 26.1
Sopen11g001780 Solanum pennellii HOM05D004113 ORTHO05D005233 6.8e-06 55.1 142 25.4


User provided reference genes

Program Settings