Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO732G0039 Papaver somniferum HOM05D006150 ORTHO05D007745 1.8e-173 612.5 297 100.0
PSO675G6476 Papaver somniferum HOM05D006150 ORTHO05D007745 1.7e-152 542.7 274 94.5
PSO732G0290 Papaver somniferum HOM05D006150 ORTHO05D007745 2.1e-150 535.8 274 93.8
TAR636G1440 Trochodendron aralioides HOM05D006150 ORTHO05D007745 3.6e-134 481.9 274 82.5
CSS0019555 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 1.7e-131 473.0 274 80.3
COL.COLO4_07285 Corchorus olitorius HOM05D006150 ORTHO05D007745 2.4e-130 469.2 274 80.7
Nn6g33757 Nelumbo nucifera HOM05D006150 ORTHO05D007745 4.1e-130 468.4 274 78.8
TWI60G0542 Tripterygium wilfordii HOM05D006150 ORTHO05D007745 1.6e-129 466.5 271 80.1
Sopen08g026350 Solanum pennellii HOM05D006150 ORTHO05D007745 2.0e-129 466.1 274 79.2
Solyc08g077840.3 Solanum lycopersicum HOM05D006150 ORTHO05D007745 6.0e-129 464.5 274 78.8
MBI04_g13858_MAGBIO Magnolia biondii HOM05D006150 ORTHO05D007745 7.8e-129 464.2 299 73.6
Rhsim07G0136400 Rhododendron simsii HOM05D006150 ORTHO05D007745 7.8e-129 464.2 299 75.3
Gohir.A12G212700 Gossypium hirsutum HOM05D006150 ORTHO05D007745 1.3e-128 463.4 274 78.8
Gorai.008G230800 Gossypium raimondii HOM05D006150 ORTHO05D007745 1.7e-128 463.0 274 78.5
Manes.01G089000 Manihot esculenta HOM05D006150 ORTHO05D007745 2.3e-128 462.6 305 75.1
Aqoxy5G02622 Aquilegia oxysepala HOM05D006150 ORTHO05D007745 3.0e-128 462.2 261 81.6
CAN.G572.11 Capsicum annuum HOM05D006150 ORTHO05D007745 3.9e-128 461.8 269 79.9
Potri.003G083600 Populus trichocarpa HOM05D006150 ORTHO05D007745 3.9e-128 461.8 271 79.7
CARHR223610 Cardamine hirsuta HOM05D006150 ORTHO05D007745 5.0e-128 461.5 298 74.8
CANSAT21G0710 Cannabis sativa HOM05D006150 ORTHO05D007745 6.6e-128 461.1 274 79.2
Gohir.D12G215200 Gossypium hirsutum HOM05D006150 ORTHO05D007745 6.6e-128 461.1 274 78.1
Thecc.03G240100 Theobroma cacao HOM05D006150 ORTHO05D007745 8.6e-128 460.7 293 75.4
DCAR_008330 Daucus carota HOM05D006150 ORTHO05D007745 1.5e-127 459.9 262 80.9
Duzib084G0008 Durio zibethinus HOM05D006150 ORTHO05D007745 1.9e-127 459.5 274 77.7
Hma1.2p1_0570F.1_g180430 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 2.5e-127 459.1 273 78.0
AL7G37660 Arabidopsis lyrata HOM05D006150 ORTHO05D007745 3.3e-127 458.8 274 78.1
THA.LOC104807929 Tarenaya hassleriana HOM05D006150 ORTHO05D007745 3.3e-127 458.8 273 78.0
BraA03t14117Z Brassica rapa HOM05D006150 ORTHO05D007745 4.3e-127 458.4 274 78.5
Carub.0007s2437 Capsella rubella HOM05D006150 ORTHO05D007745 5.6e-127 458.0 298 74.8
BcaNung04656 Brassica carinata HOM05D006150 ORTHO05D007745 9.5e-127 457.2 274 78.1
Ciclev10021365m.g Citrus clementina HOM05D006150 ORTHO05D007745 9.5e-127 457.2 295 74.6
PGSC0003DMG400026243 Solanum tuberosum HOM05D006150 ORTHO05D007745 9.5e-127 457.2 274 77.4
EL10Ac5g12270 Beta vulgaris HOM05D006150 ORTHO05D007745 2.1e-126 456.1 274 76.3
BraA01t01953Z Brassica rapa HOM05D006150 ORTHO05D007745 2.8e-126 455.7 304 73.4
A03p50280 Brassica napus HOM05D006150 ORTHO05D007745 3.6e-126 455.3 274 78.1
C07p48520 Brassica napus HOM05D006150 ORTHO05D007745 4.7e-126 454.9 274 77.7
BolC7t45360H Brassica oleracea HOM05D006150 ORTHO05D007745 4.7e-126 454.9 274 77.7
AT4G17050 Arabidopsis thaliana HOM05D006150 ORTHO05D007745 6.2e-126 454.5 298 75.2
C07p48460 Brassica napus HOM05D006150 ORTHO05D007745 1.4e-125 453.4 299 74.6
Cfa012327 Carpinus fangiana HOM05D006150 ORTHO05D007745 1.8e-125 453.0 274 76.6
CsaV3_3G004750 Cucumis sativus L. HOM05D006150 ORTHO05D007745 1.8e-125 453.0 273 78.0
Lj8A277T42 Lonicera japonica HOM05D006150 ORTHO05D007745 2.3e-125 452.6 259 80.3
ClCG10G005070 Citrullus lanatus HOM05D006150 ORTHO05D007745 5.2e-125 451.4 273 77.3
MSTRG.6640 Avicennia marina HOM05D006150 ORTHO05D007745 1.2e-124 450.3 259 78.8
BolC1t02493H Brassica oleracea HOM05D006150 ORTHO05D007745 1.2e-124 450.3 298 73.8
CiPaw.11G072300 Carya illinoinensis HOM05D006150 ORTHO05D007745 1.2e-124 450.3 277 75.5
RcHm_v2.0_Chr7g0205681 Rosa chinensis HOM05D006150 ORTHO05D007745 1.2e-124 450.3 272 77.6
MD04G1055500 Malus domestica HOM05D006150 ORTHO05D007745 2.6e-124 449.1 274 77.4
Sp7g17140 Schrenkiella parvula HOM05D006150 ORTHO05D007745 3.4e-124 448.7 298 72.8
BcaC06g33538 Brassica carinata HOM05D006150 ORTHO05D007745 4.4e-124 448.4 274 77.0
PGR031G0533 Punica granatum HOM05D006150 ORTHO05D007745 7.5e-124 447.6 259 79.5
C07p48390 Brassica napus HOM05D006150 ORTHO05D007745 2.9e-123 445.7 300 73.3
BcaNung00130 Brassica carinata HOM05D006150 ORTHO05D007745 3.7e-123 445.3 299 72.2
Atru.chr9.1206 Acer truncatum HOM05D006150 ORTHO05D007745 8.3e-123 444.1 262 79.0
ATR0665G013 Amborella trichopoda HOM05D006150 ORTHO05D007745 8.3e-123 444.1 281 75.4
FvH4_5g20400 Fragaria vesca HOM05D006150 ORTHO05D007745 1.1e-122 443.7 268 78.4
Sed0022790 Sechium edule HOM05D006150 ORTHO05D007745 1.4e-122 443.4 273 75.5
Eucgr.D02133 Eucalyptus grandis HOM05D006150 ORTHO05D007745 1.9e-122 443.0 270 76.3
FAN04G1813 Fragaria x ananassa HOM05D006150 ORTHO05D007745 2.4e-122 442.6 272 76.1
Ah.12g053980 Amaranthus hybridus HOM05D006150 ORTHO05D007745 3.2e-122 442.2 273 73.3
CDE12G0966 Ceratophyllum demersum HOM05D006150 ORTHO05D007745 9.2e-122 440.7 260 77.7
HanXRQChr17g0534011 Helianthus annuus HOM05D006150 ORTHO05D007745 9.2e-122 440.7 272 77.2
arahy.Tifrunner.gnm1.ann1.IPM3U6 Arachis hypogaea HOM05D006150 ORTHO05D007745 2.1e-121 439.5 294 72.1
Os07g0495000 Oryza sativa ssp. japonica HOM05D006150 ORTHO05D007745 4.6e-121 438.3 258 77.5
SalBow7G3619 Salvia bowleyana HOM05D006150 ORTHO05D007745 1.3e-120 436.8 258 76.7
Cc08_g11330 Coffea canephora HOM05D006150 ORTHO05D007745 1.7e-120 436.4 274 75.2
Glyma.05G066500 Glycine max HOM05D006150 ORTHO05D007745 1.7e-120 436.4 293 70.3
TPR.G25747 Trifolium pratense HOM05D006150 ORTHO05D007745 2.3e-120 436.0 293 70.0
FAN08G0760 Fragaria x ananassa HOM05D006150 ORTHO05D007745 3.9e-120 435.3 265 76.2
Glyma.17G148400 Glycine max HOM05D006150 ORTHO05D007745 3.9e-120 435.3 291 70.1
Lalb_Chr09g0329771 Lupinus albus HOM05D006150 ORTHO05D007745 5.1e-120 434.9 274 74.1
ECA234G2169 Erigeron canadensis HOM05D006150 ORTHO05D007745 1.9e-119 433.0 291 72.2
Nitab4.5_0000500g0240 Nicotiana tabacum HOM05D006150 ORTHO05D007745 1.9e-119 433.0 271 75.6
Haze_08363 Corylus avellana HOM05D006150 ORTHO05D007745 3.3e-119 432.2 299 69.6
arahy.Tifrunner.gnm1.ann1.YY6LCE Arachis hypogaea HOM05D006150 ORTHO05D007745 9.5e-119 430.6 294 71.8
Phvul.003G225600 Phaseolus vulgaris HOM05D006150 ORTHO05D007745 8.1e-118 427.6 273 72.2
Zm00001eb322060 Zea mays HOM05D006150 ORTHO05D007745 8.1e-118 427.6 258 76.0
A01p20260 Brassica napus HOM05D006150 ORTHO05D007745 3.1e-117 425.6 287 73.5
Ca_22017_v3 Cicer arietinum L. HOM05D006150 ORTHO05D007745 1.5e-116 423.3 297 67.3
VMungo0251G1767 Vigna mungo HOM05D006150 ORTHO05D007745 1.7e-115 419.9 274 69.7
unitig_746.g26644 Utricularia gibba HOM05D006150 ORTHO05D007745 2.2e-115 419.5 258 72.5
Lj4g0002003 Lotus japonicus HOM05D006150 ORTHO05D007745 6.4e-115 417.9 298 68.5
Medtr4g099290 Medicago truncatula HOM05D006150 ORTHO05D007745 1.9e-114 416.4 297 66.7
Nitab4.5_0009451g0030 Nicotiana tabacum HOM05D006150 ORTHO05D007745 4.1e-114 415.2 305 67.5
QL12p008732 Quercus lobata HOM05D006150 ORTHO05D007745 9.2e-114 414.1 379 56.5
HPP92_025744 Vanilla planifolia HOM05D006150 ORTHO05D007745 6.0e-113 411.4 292 68.5
Dinv28876 Davidia involucrata HOM05D006150 ORTHO05D007745 6.6e-112 407.9 248 78.2
Thhalv10026866m.g Eutrema salsugineum HOM05D006150 ORTHO05D007745 2.5e-111 406.0 311 68.2
vmacro00832 Vaccinium macrocarpon HOM05D006150 ORTHO05D007745 8.1e-110 401.0 296 67.9
Peaxi162Scf00301g00519 Petunia axillaris HOM05D006150 ORTHO05D007745 1.1e-109 400.6 233 79.0
SEGI_33649 Sequoiadendron giganteum HOM05D006150 ORTHO05D007745 1.1e-109 400.6 258 73.3
BcaC09g50439 Brassica carinata HOM05D006150 ORTHO05D007745 2.2e-107 392.9 299 67.6
C01p25410 Brassica napus HOM05D006150 ORTHO05D007745 2.2e-107 392.9 299 67.6
Aa31LG2G13130 Aethionema arabicum HOM05D006150 ORTHO05D007745 3.2e-106 389.0 298 64.8
Actinidia02195 Actinidia chinensis HOM05D006150 ORTHO05D007745 2.1e-105 386.3 263 71.1
Psat4g076080 Pisum sativum HOM05D006150 ORTHO05D007745 6.6e-104 381.3 253 70.8
Pp3c9_12580 Physcomitrium patens HOM05D006150 ORTHO05D007745 3.1e-101 372.5 293 63.5
Sc01g0007980 Simmondsia chinensis HOM05D006150 ORTHO05D007745 5.8e-100 368.2 226 77.0
Prupe.5G055300 Prunus persica HOM05D006150 ORTHO05D007745 3.8e-99 365.5 212 80.7
Mapoly0072s0097 Marchantia polymorpha HOM05D006150 ORTHO05D007745 8.4e-99 364.4 261 63.2
AagrBONN_evm.TU.Sc2ySwM_228.2274 Anthoceros agrestis HOM05D006150 ORTHO05D007745 6.0e-97 358.2 248 69.4
Oeu012348.1 Olea europaea HOM05D006150 ORTHO05D007745 8.1e-94 347.8 211 77.7
GSVIVG01003685001 Vitis vinifera HOM05D006150 ORTHO05D007745 9.9e-92 340.9 274 63.1
AUR62007167 Chenopodium quinoa HOM05D006150 ORTHO05D007745 8.4e-91 337.8 202 76.2
AUR62018839 Chenopodium quinoa HOM05D006150 ORTHO05D007745 1.1e-90 337.4 202 75.2
SGA_v2.0_scaffold181G39680 Striga asiatica HOM05D006150 ORTHO05D007745 4.2e-90 335.5 242 69.8
Lsat_1_v5_gn_3_15361 Lactuca sativa HOM05D006150 ORTHO05D007745 1.6e-89 333.6 250 66.4
Cre06.g290000 Chlamydomonas reinhardtii HOM05D006150 ORTHO05D007745 3.8e-67 259.2 259 50.6
MCO07G379 Micromonas commoda HOM05D006150 ORTHO05D007745 6.5e-67 258.5 265 49.1
Actinidia25909 Actinidia chinensis HOM05D006150 ORTHO05D007745 1.9e-66 256.9 301 49.2
Potri.001G150800 Populus trichocarpa HOM05D006150 ORTHO05D007745 1.3e-62 244.2 195 64.1
MD06G1047100 Malus domestica HOM05D006150 ORTHO05D007745 4.8e-62 242.3 262 50.0
MCO04G282 Micromonas commoda HOM05D006150 ORTHO05D007745 2.0e-55 220.3 262 46.2
Sabra01G0120800 Salix brachista HOM05D006150 ORTHO05D007745 3.0e-48 196.4 150 65.3
MELO3C014174.2 Cucumis melo HOM05D006150 ORTHO05D007745 8.8e-48 194.9 266 45.9
Hma1.2p1_0570F.1_g180440 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 2.6e-44 183.3 122 70.5
FAN18G0603 Fragaria x ananassa HOM05D006150 ORTHO05D007745 3.5e-44 183.0 116 76.7
PSO717G0125 Papaver somniferum HOM05D006150 ORTHO05D007745 8.0e-41 171.8 85 95.3
CSS0048254 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 6.8e-40 168.7 97 81.4
Sabra01G0120600 Salix brachista HOM05D006150 ORTHO05D007745 3.1e-37 159.8 163 54.0
Cpa.g.sc98.38 Carica papaya HOM05D006150 ORTHO05D007745 6.3e-30 135.6 81 72.8
CBR_g38093 Chara braunii HOM05D006150 ORTHO05D007745 1.6e-28 131.0 66 83.3
BcaC01g03436 Brassica carinata HOM05D006150 ORTHO05D007745 5.5e-26 122.5 94 62.8
GSVIVG01021810001 Vitis vinifera HOM05D006150 ORTHO05D007745 1.1e-13 81.6 67 58.2
Cpa.g.sc98.35 Carica papaya HOM05D006150 ORTHO05D007745 7.0e-13 79.0 56 64.3
Oeu040463.1 Olea europaea HOM05D001574 ORTHO05D000708 3.1e-08 63.5 57 54.4
MELO3C000773.2 Cucumis melo HOM05D006150 ORTHO05D007745 1.2e-07 61.6 39 76.9
Lsat_1_v5_gn_6_74120 Lactuca sativa HOM05D006150 ORTHO05D233887 1.5e-07 61.2 33 78.8


User provided reference genes

Program Settings