Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 1.2e-133 479.9 250 100.0
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 2.7e-130 468.8 250 97.2
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 1.8e-110 402.9 250 80.4
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 2.3e-110 402.5 245 78.8
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 5.2e-110 401.4 245 80.8
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 5.2e-110 401.4 245 81.2
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 8.9e-110 400.6 245 80.0
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 4.4e-109 398.3 243 80.7
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 1.7e-108 396.4 241 80.1
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 3.7e-108 395.2 247 81.0
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 4.9e-108 394.8 241 80.1
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 4.9e-108 394.8 245 79.2
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 4.9e-108 394.8 243 80.7
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 2.4e-107 392.5 245 78.8
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 3.2e-107 392.1 245 79.2
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 5.4e-107 391.3 240 80.0
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 5.4e-107 391.3 243 79.4
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 5.4e-107 391.3 245 78.4
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 2.7e-106 389.0 243 78.2
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 2.7e-106 389.0 245 77.6
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 2.7e-106 389.0 245 77.6
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 3.5e-106 388.7 245 77.6
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 1.0e-105 387.1 244 77.0
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 1.3e-105 386.7 246 76.8
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 2.3e-105 386.0 241 80.5
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 3.0e-105 385.6 243 77.4
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 3.9e-105 385.2 245 77.1
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 6.6e-105 384.4 249 75.9
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 6.6e-105 384.4 249 75.9
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 1.1e-104 383.6 249 75.9
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 1.1e-104 383.6 245 75.9
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 1.1e-104 383.6 245 77.6
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 2.5e-104 382.5 245 75.9
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 3.3e-104 382.1 245 76.3
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 3.3e-104 382.1 245 77.1
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 2.1e-103 379.4 245 74.7
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 2.1e-103 379.4 257 75.1
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 2.8e-103 379.0 245 76.3
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 3.6e-103 378.6 244 75.4
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 4.7e-103 378.3 247 75.3
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 8.1e-103 377.5 250 74.8
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 1.4e-102 376.7 245 75.1
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 1.8e-102 376.3 245 75.5
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 1.8e-102 376.3 249 75.1
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 1.8e-102 376.3 245 76.3
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 2.3e-102 375.9 245 74.3
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 3.1e-102 375.6 246 74.4
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 3.1e-102 375.6 246 74.4
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 3.1e-102 375.6 246 74.4
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 4.0e-102 375.2 245 75.9
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 5.2e-102 374.8 246 74.0
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 1.2e-101 373.6 246 73.6
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 1.2e-101 373.6 250 75.2
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 1.5e-101 373.2 250 73.6
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 2.6e-101 372.5 244 75.0
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 2.6e-101 372.5 244 75.0
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 3.4e-101 372.1 246 73.2
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 4.4e-101 371.7 246 75.2
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 4.4e-101 371.7 252 73.8
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 4.4e-101 371.7 250 73.2
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 5.8e-101 371.3 245 74.3
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 5.8e-101 371.3 245 75.1
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 2.2e-100 369.4 246 74.8
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 2.9e-100 369.0 245 73.9
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 1.4e-99 366.7 245 74.3
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 1.9e-99 366.3 248 74.6
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 3.2e-99 365.5 244 74.6
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 4.1e-99 365.2 246 72.8
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 9.2e-99 364.0 246 73.6
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 1.6e-98 363.2 249 73.9
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 6.0e-98 361.3 245 71.8
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 1.7e-97 359.8 268 69.0
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 5.1e-97 358.2 245 72.7
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 1.5e-96 356.7 242 71.5
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 2.5e-96 355.9 249 69.5
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 3.3e-96 355.5 234 73.9
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 2.6e-93 345.9 243 70.0
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 9.9e-93 344.0 245 69.8
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 2.4e-91 339.3 245 69.8
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 3.2e-91 339.0 245 71.0
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 5.4e-91 338.2 245 71.0
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 6.6e-89 331.3 250 68.0
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 3.3e-88 328.9 203 81.3
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 5.6e-88 328.2 228 73.7
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 1.6e-87 326.6 200 82.0
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 3.6e-87 325.5 240 68.3
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 1.4e-86 323.6 207 77.8
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 3.8e-84 315.5 245 63.7
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 2.4e-83 312.8 210 75.2
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 2.7e-82 309.3 184 83.7
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 4.6e-82 308.5 245 65.3
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 3.9e-81 305.4 200 72.0
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 1.9e-80 303.1 247 64.0
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 9.0e-78 294.3 200 75.0
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 3.4e-77 292.4 194 69.1
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 2.4e-75 286.2 245 62.0
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 7.9e-74 281.2 265 62.6
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 2.5e-72 276.2 248 59.7
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 3.6e-71 272.3 241 58.5
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 5.5e-67 258.5 241 53.1
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 2.5e-64 249.6 238 52.9
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 4.0e-62 242.3 152 81.6
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 5.3e-62 241.9 161 78.9
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 5.3e-62 241.9 236 51.3
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 4.5e-61 238.8 152 80.3
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 1.3e-60 237.3 239 50.6
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 1.1e-59 234.2 167 66.5
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 2.3e-57 226.5 117 97.4
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 2.5e-56 223.0 113 99.1
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 4.3e-56 222.2 200 63.5
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 4.3e-48 195.7 151 60.9
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 6.9e-46 188.3 111 78.4
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 3.2e-35 152.9 119 65.5
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 4.7e-34 149.1 231 41.6
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 9.7e-32 141.4 102 69.6
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 1.4e-30 137.5 93 67.7
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 1.8e-30 137.1 91 73.6
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 1.8e-17 94.0 74 63.5
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 2.2e-15 87.0 159 41.5
PRCOL_00006256 Prasinoderma coloniale HOM05D006537 ORTHO05D008186 1.6e-13 80.9 231 28.1
Cpa.g.c46401 Carica papaya HOM05D006537 ORTHO05D008186 9.8e-08 61.6 38 65.8
Sopen06g005930 Solanum pennellii HOM05D006537 ORTHO05D008186 2.4e-06 57.0 38 76.3


User provided reference genes

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