Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO732G0001 Papaver somniferum HOM05D006869 ORTHO05D008641 9.3e-70 266.9 152 100.0
PSO675G8621 Papaver somniferum HOM05D006869 ORTHO05D008641 2.4e-65 252.3 152 94.1
PSO832G0919 Papaver somniferum HOM05D006869 ORTHO05D008641 2.6e-64 248.8 152 94.1
Aqoxy3G02480 Aquilegia oxysepala HOM05D006869 ORTHO05D008641 2.6e-35 152.5 121 74.4
COL.COLO4_17099 Corchorus olitorius HOM05D006869 ORTHO05D008641 1.4e-33 146.7 124 65.3
Atru.chr6.1763 Acer truncatum HOM05D006869 ORTHO05D008641 2.4e-33 146.0 130 63.8
TAR375G0341 Trochodendron aralioides HOM05D006869 ORTHO05D008641 2.4e-33 146.0 109 75.2
CSS0028384 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 2.7e-32 142.5 119 68.1
CSS0030709 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 2.7e-32 142.5 119 68.1
Gohir.A09G198300 Gossypium hirsutum HOM05D006869 ORTHO05D008641 2.9e-31 139.0 124 62.9
Potri.001G145500 Populus trichocarpa HOM05D006869 ORTHO05D008641 2.9e-31 139.0 123 64.2
Cpa.g.sc6.427 Carica papaya HOM05D006869 ORTHO05D008641 3.8e-31 138.7 121 67.8
Duzib205G1446 Durio zibethinus HOM05D006869 ORTHO05D008641 3.8e-31 138.7 129 62.8
Nn1g00590 Nelumbo nucifera HOM05D006869 ORTHO05D008641 5.0e-31 138.3 108 69.4
Manes.15G174500 Manihot esculenta HOM05D006869 ORTHO05D008641 8.5e-31 137.5 130 64.6
Actinidia09229 Actinidia chinensis HOM05D002067 ORTHO05D002244 1.1e-30 137.1 129 62.0
Ciclev10033051m.g Citrus clementina HOM05D006869 ORTHO05D008641 1.1e-30 137.1 123 65.9
Lj3g0015338 Lotus japonicus HOM05D006869 ORTHO05D008641 1.1e-30 137.1 106 71.7
Sc22g0001440 Simmondsia chinensis HOM05D006869 ORTHO05D008641 1.5e-30 136.7 123 64.2
Hma1.2p1_0414F.1_g147870 Hydrangea macrophylla HOM05D006869 ORTHO05D008641 1.9e-30 136.3 100 75.0
Phvul.005G061500 Phaseolus vulgaris HOM05D006869 ORTHO05D008641 2.5e-30 136.0 106 70.8
Thecc.03G232900 Theobroma cacao HOM05D006869 ORTHO05D008641 3.2e-30 135.6 103 72.8
TWI15G0987 Tripterygium wilfordii HOM05D006869 ORTHO05D008641 7.2e-30 134.4 120 67.5
Gohir.D09G192900 Gossypium hirsutum HOM05D006869 ORTHO05D008641 1.2e-29 133.7 124 61.3
Ca_03396_v3 Cicer arietinum L. HOM05D006869 ORTHO05D008641 1.6e-29 133.3 107 69.2
Glyma.13G259900 Glycine max HOM05D006869 ORTHO05D008641 1.6e-29 133.3 94 76.6
Eucgr.E00305 Eucalyptus grandis HOM05D006869 ORTHO05D008641 2.1e-29 132.9 111 68.5
MD06G1029000 Malus domestica HOM05D006869 ORTHO05D008641 2.1e-29 132.9 109 69.7
Prupe.5G042800 Prunus persica HOM05D006869 ORTHO05D008641 2.1e-29 132.9 102 71.6
CiPaw.12G061200 Carya illinoinensis HOM05D006869 ORTHO05D008641 4.7e-29 131.7 102 71.6
VMungo1080G1596 Vigna mungo HOM05D006869 ORTHO05D008641 4.7e-29 131.7 111 66.7
FvH4_5g21430 Fragaria vesca HOM05D006869 ORTHO05D008641 6.1e-29 131.3 102 70.6
Glyma.15G248100 Glycine max HOM05D006869 ORTHO05D008641 6.1e-29 131.3 95 75.8
PGR042G2539 Punica granatum HOM05D006869 ORTHO05D008641 6.1e-29 131.3 115 63.5
Hund14421 Selenicereus undatus HOM05D006869 ORTHO05D008641 8.0e-29 131.0 113 66.4
CsaV3_1G016990 Cucumis sativus L. HOM05D006869 ORTHO05D008641 1.0e-28 130.6 124 57.3
CsaV3_3G049460 Cucumis sativus L. HOM05D006869 ORTHO05D008641 1.0e-28 130.6 124 57.3
GSVIVG01013242001 Vitis vinifera HOM05D006869 ORTHO05D008641 1.0e-28 130.6 109 66.1
TPR.G26622 Trifolium pratense HOM05D006869 ORTHO05D008641 1.4e-28 130.2 117 64.1
CANSAT21G0218 Cannabis sativa HOM05D006869 ORTHO05D008641 3.0e-28 129.0 113 64.6
Migut.D00490 Erythranthe guttata HOM05D006869 ORTHO05D008641 3.0e-28 129.0 98 70.4
PGSC0003DMG400026597 Solanum tuberosum HOM05D006869 ORTHO05D008641 3.0e-28 129.0 125 58.4
MELO3C003378.2 Cucumis melo HOM05D006869 ORTHO05D008641 4.0e-28 128.6 124 56.5
Medtr2g071640 Medicago truncatula HOM05D006869 ORTHO05D008641 4.0e-28 128.6 102 68.6
RcHm_v2.0_Chr7g0208861 Rosa chinensis HOM05D006869 ORTHO05D008641 8.8e-28 127.5 111 64.0
DCAR_005606 Daucus carota HOM05D006869 ORTHO05D008641 1.2e-27 127.1 133 57.1
CiPaw.11G089700 Carya illinoinensis HOM05D006869 ORTHO05D008641 1.5e-27 126.7 121 60.3
Actinidia14827 Actinidia chinensis HOM05D006869 ORTHO05D008641 2.0e-27 126.3 140 55.7
FAN04G2266 Fragaria x ananassa HOM05D006869 ORTHO05D008641 2.0e-27 126.3 108 67.6
Sopen06g021250 Solanum pennellii HOM05D006869 ORTHO05D008641 2.6e-27 125.9 125 57.6
DCAR_024975 Daucus carota HOM05D006869 ORTHO05D008641 4.4e-27 125.2 116 61.2
FAN08G2623 Fragaria x ananassa HOM05D006869 ORTHO05D008641 4.4e-27 125.2 107 67.3
FAN18G0870 Fragaria x ananassa HOM05D006869 ORTHO05D008641 5.7e-27 124.8 108 66.7
FAN13G1368 Fragaria x ananassa HOM05D006869 ORTHO05D008641 7.5e-27 124.4 118 62.7
arahy.Tifrunner.gnm1.ann1.TLF144 Arachis hypogaea HOM05D006869 ORTHO05D008641 3.7e-26 122.1 123 57.7
arahy.Tifrunner.gnm1.ann1.U4TMK5 Arachis hypogaea HOM05D006869 ORTHO05D008641 3.7e-26 122.1 102 63.7
MSTRG.17527 Avicennia marina HOM05D006869 ORTHO05D008641 6.3e-26 121.3 108 62.0
ClCG09G012310 Citrullus lanatus HOM05D006869 ORTHO05D008641 6.3e-26 121.3 133 51.9
Lalb_Chr25g0285441 Lupinus albus HOM05D006869 ORTHO05D008641 1.1e-25 120.6 112 61.6
Gorai.006G215800 Gossypium raimondii HOM05D006869 ORTHO05D008641 4.1e-25 118.6 161 48.4
HanXRQChr08g0227941 Helianthus annuus HOM05D006869 ORTHO05D008641 4.1e-25 118.6 104 62.5
arahy.Tifrunner.gnm1.ann1.4F5UFQ Arachis hypogaea HOM05D006869 ORTHO05D008641 5.4e-25 118.2 123 56.9
HPP92_026375 Vanilla planifolia HOM05D006869 ORTHO05D008641 9.1e-25 117.5 107 57.9
ECA233G4479 Erigeron canadensis HOM05D006869 ORTHO05D008641 3.5e-24 115.5 120 59.2
Sabra01G0114100 Salix brachista HOM05D006869 ORTHO05D008641 3.5e-24 115.5 154 48.7
Zm00001eb024260 Zea mays HOM05D006869 ORTHO05D008641 3.5e-24 115.5 117 58.1
Nitab4.5_0003100g0080 Nicotiana tabacum HOM05D006869 ORTHO05D008641 5.9e-24 114.8 148 52.0
THA.LOC104798477 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 5.9e-24 114.8 95 66.3
THA.LOC104798593 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 1.0e-23 114.0 95 65.3
Os02g0279600 Oryza sativa ssp. japonica HOM05D006869 ORTHO05D008641 1.3e-23 113.6 113 58.4
AL1G46570 Arabidopsis lyrata HOM05D006869 ORTHO05D008641 3.8e-23 112.1 95 67.4
Sp1g28510 Schrenkiella parvula HOM05D006869 ORTHO05D008641 3.8e-23 112.1 95 67.4
AT1G32370 Arabidopsis thaliana HOM05D006869 ORTHO05D008641 1.1e-22 110.5 95 66.3
Carub.0001s3075 Capsella rubella HOM05D006869 ORTHO05D008641 1.9e-22 109.8 95 65.3
Thhalv10009100m.g Eutrema salsugineum HOM05D006869 ORTHO05D008641 4.2e-22 108.6 95 65.3
Aa31LG2G13630 Aethionema arabicum HOM05D006869 ORTHO05D008641 5.5e-22 108.2 95 64.2
BcaB07g32921 Brassica carinata HOM05D006869 ORTHO05D008641 5.5e-22 108.2 95 64.2
CARHR031750 Cardamine hirsuta HOM05D006869 ORTHO05D008641 5.5e-22 108.2 99 65.7
unitig_746.g26748 Utricularia gibba HOM05D006869 ORTHO05D008641 9.5e-22 107.5 112 55.4
A09p33790 Brassica napus HOM05D006869 ORTHO05D008641 1.2e-21 107.1 105 61.9
BraA09t38929Z Brassica rapa HOM05D006869 ORTHO05D008641 1.2e-21 107.1 105 61.9
BcaC05g27275 Brassica carinata HOM05D006869 ORTHO05D008641 1.6e-21 106.7 105 61.9
C05p31830 Brassica napus HOM05D006869 ORTHO05D008641 1.6e-21 106.7 105 61.9
BolC5t31911H Brassica oleracea HOM05D006869 ORTHO05D008641 1.6e-21 106.7 105 61.9
Oeu015441.1 Olea europaea HOM05D006869 ORTHO05D008641 8.0e-21 104.4 92 64.1
SGA_v2.0_scaffold94G28479 Striga asiatica HOM05D006869 ORTHO05D008641 3.0e-20 102.4 102 59.8
THA.LOC104822843 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 5.2e-20 101.7 84 65.5
Rhsim07G0123600 Rhododendron simsii HOM05D006869 ORTHO05D008641 8.8e-20 100.9 80 67.5
vmacro14155 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 2.0e-19 99.8 89 62.9
MBI04_g13865_MAGBIO Magnolia biondii HOM05D006869 ORTHO05D008641 7.5e-19 97.8 86 61.6
Sed0006536 Sechium edule HOM05D006869 ORTHO05D008641 9.8e-19 97.4 101 54.5
ATR0049G078 Amborella trichopoda HOM05D006869 ORTHO05D008641 2.2e-18 96.3 77 63.6
SEGI_28722 Sequoiadendron giganteum HOM05D006869 ORTHO05D008641 2.8e-18 95.9 99 57.6
EL10Ac5g12174 Beta vulgaris HOM05D006869 ORTHO05D008641 1.8e-17 93.2 65 72.3
Cc08_g02310 Coffea canephora HOM05D006869 ORTHO05D008641 1.8e-17 93.2 75 66.7
Nitab4.5_0004658g0060 Nicotiana tabacum HOM05D006869 ORTHO05D008641 4.1e-17 92.0 79 64.6
Lsat_1_v5_gn_6_67180 Lactuca sativa HOM05D006869 ORTHO05D008641 5.4e-17 91.7 67 70.1
Dinv25192 Davidia involucrata HOM05D006869 ORTHO05D008641 7.0e-17 91.3 152 45.4
Peaxi162Scf00497g00098 Petunia axillaris HOM05D006869 ORTHO05D008641 3.5e-16 89.0 75 64.0
Ah.07g200090 Amaranthus hybridus HOM05D006869 ORTHO05D008641 5.9e-16 88.2 71 63.4
SalBow6G5905 Salvia bowleyana HOM05D006869 ORTHO05D008641 4.3e-14 82.0 83 51.8
Psat1g009440 Pisum sativum HOM05D006869 ORTHO05D008641 8.0e-13 77.8 57 73.7
Haze_08288 Corylus avellana HOM05D006869 ORTHO05D008641 4.4e-11 72.0 65 64.6
vmacro23515 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 2.2e-10 69.7 44 75.0
AagrBONN_evm.TU.Sc2ySwM_228.2858 Anthoceros agrestis HOM05D006869 ORTHO05D008641 2.9e-10 69.3 95 47.4
BcaC05g27873 Brassica carinata HOM05D006869 ORTHO05D008641 2.9e-10 69.3 101 51.5
C05p38760 Brassica napus HOM05D006869 ORTHO05D008641 2.9e-10 69.3 101 51.5
Dinv28924 Davidia involucrata HOM05D002067 ORTHO05D002244 3.7e-10 68.9 43 79.1
Mapoly0009s0146 Marchantia polymorpha HOM05D006869 ORTHO05D008641 1.8e-09 66.6 119 40.3
Zm00001eb390630 Zea mays HOM05D006869 ORTHO05D008641 7.0e-09 64.7 52 65.4
BolC5t32616H Brassica oleracea HOM05D006869 ORTHO05D008641 1.6e-08 63.5 68 57.4
PGR142G3578 Punica granatum HOM05D006869 ORTHO05D008641 3.5e-08 62.4 54 57.4


User provided reference genes

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