Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO731G0021 Papaver somniferum HOM05D006275 ORTHO05D007839 2.5e-77 292.0 142 100.0
PSO764G0160 Papaver somniferum HOM05D006275 ORTHO05D007839 2.8e-76 288.5 142 98.6
Cpa.g.c33902 Carica papaya HOM05D006275 ORTHO05D007839 3.2e-48 195.3 142 71.1
TAR628G1199 Trochodendron aralioides HOM05D006275 ORTHO05D007839 1.2e-47 193.4 143 72.0
Gorai.009G200300 Gossypium raimondii HOM05D006275 ORTHO05D007839 2.1e-47 192.6 143 72.7
Gohir.D05G195400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 2.7e-47 192.2 143 72.7
Gohir.A05G192200 Gossypium hirsutum HOM05D006275 ORTHO05D007839 1.4e-46 189.9 143 72.0
Nn1g04018 Nelumbo nucifera HOM05D006275 ORTHO05D007839 3.0e-46 188.7 143 69.2
FvH4_2g39490 Fragaria vesca HOM05D006275 ORTHO05D007839 8.8e-46 187.2 145 67.6
ECA232G2653 Erigeron canadensis HOM05D006275 ORTHO05D007839 1.5e-45 186.4 140 66.4
FAN15G2697 Fragaria x ananassa HOM05D006275 ORTHO05D007839 2.0e-45 186.0 142 67.6
Thecc.08G031000 Theobroma cacao HOM05D006275 ORTHO05D007839 2.6e-45 185.7 143 70.6
GSVIVG01009748001 Vitis vinifera HOM05D006275 ORTHO05D007839 3.3e-45 185.3 143 68.5
Prupe.1G376100 Prunus persica HOM05D006275 ORTHO05D007839 4.4e-45 184.9 142 69.0
PGR031G1371 Punica granatum HOM05D006275 ORTHO05D007839 4.4e-45 184.9 142 65.5
RcHm_v2.0_Chr6g0301461 Rosa chinensis HOM05D006275 ORTHO05D007839 4.4e-45 184.9 141 66.7
FAN27G1059 Fragaria x ananassa HOM05D006275 ORTHO05D007839 7.4e-45 184.1 142 66.9
CSS0002686 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 1.7e-44 183.0 142 64.1
CSS0030866 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 1.7e-44 183.0 142 64.1
Manes.05G156800 Manihot esculenta HOM05D006275 ORTHO05D007839 2.8e-44 182.2 142 66.9
HanXRQChr09g0268981 Helianthus annuus HOM05D006275 ORTHO05D007839 3.7e-44 181.8 142 64.8
Duzib093G0437 Durio zibethinus HOM05D006275 ORTHO05D007839 6.3e-44 181.0 143 68.5
Dinv39443 Davidia involucrata HOM05D006275 ORTHO05D007839 1.4e-43 179.9 142 66.9
Migut.J00614 Erythranthe guttata HOM05D006275 ORTHO05D007839 1.8e-43 179.5 143 65.7
A05p02860 Brassica napus HOM05D006275 ORTHO05D007839 2.4e-43 179.1 147 63.3
BraA05t19277Z Brassica rapa HOM05D006275 ORTHO05D007839 2.4e-43 179.1 147 63.3
Lsat_1_v5_gn_4_117720 Lactuca sativa HOM05D006275 ORTHO05D007839 3.1e-43 178.7 143 63.6
Ah.05g177020 Amaranthus hybridus HOM05D006275 ORTHO05D007839 4.1e-43 178.3 142 65.5
MSTRG.1264 Avicennia marina HOM05D006275 ORTHO05D007839 4.1e-43 178.3 144 65.3
C04p03490 Brassica napus HOM05D006275 ORTHO05D007839 4.1e-43 178.3 147 62.6
CiPaw.07G158800 Carya illinoinensis HOM05D006275 ORTHO05D007839 4.1e-43 178.3 145 64.8
unitig_46.g17937 Utricularia gibba HOM05D006275 ORTHO05D007839 4.1e-43 178.3 143 64.3
Peaxi162Scf00140g10025 Petunia axillaris HOM05D006275 ORTHO05D007839 5.3e-43 177.9 137 64.2
Potri.002G033300 Populus trichocarpa HOM05D006275 ORTHO05D007839 5.3e-43 177.9 142 66.2
HanXRQChr16g0501501 Helianthus annuus HOM05D006275 ORTHO05D007839 6.9e-43 177.6 143 64.3
Thhalv10019294m.g Eutrema salsugineum HOM05D006275 ORTHO05D007839 9.1e-43 177.2 152 61.8
CARHR068700 Cardamine hirsuta HOM05D006275 ORTHO05D007839 1.2e-42 176.8 149 63.8
COL.COLO4_26271 Corchorus olitorius HOM05D006275 ORTHO05D007839 1.2e-42 176.8 142 67.6
Lalb_Chr22g0354641 Lupinus albus HOM05D006275 ORTHO05D007839 1.5e-42 176.4 143 65.7
BcaC08g47007 Brassica carinata HOM05D006275 ORTHO05D007839 2.0e-42 176.0 152 60.5
A07p40910 Brassica napus HOM05D006275 ORTHO05D007839 2.0e-42 176.0 148 62.2
BraA07t31631Z Brassica rapa HOM05D006275 ORTHO05D007839 2.0e-42 176.0 148 62.2
Sed0006872 Sechium edule HOM05D006275 ORTHO05D007839 2.0e-42 176.0 142 64.8
THA.LOC104811376 Tarenaya hassleriana HOM05D006275 ORTHO05D007839 2.0e-42 176.0 150 61.3
AL2G35280 Arabidopsis lyrata HOM05D006275 ORTHO05D007839 2.6e-42 175.6 151 63.6
BcaC02g12477 Brassica carinata HOM05D006275 ORTHO05D007839 2.6e-42 175.6 147 61.9
BolC4t21983H Brassica oleracea HOM05D006275 ORTHO05D007839 2.6e-42 175.6 147 61.9
ClCG05G018790 Citrullus lanatus HOM05D006275 ORTHO05D007839 3.4e-42 175.3 144 67.4
BcaC08g47361 Brassica carinata HOM05D006275 ORTHO05D007839 4.5e-42 174.9 148 62.8
C06p49340 Brassica napus HOM05D006275 ORTHO05D007839 4.5e-42 174.9 148 62.8
BolC6t39969H Brassica oleracea HOM05D006275 ORTHO05D007839 4.5e-42 174.9 148 62.8
EL10Ac1g00643 Beta vulgaris HOM05D006275 ORTHO05D007839 5.9e-42 174.5 146 62.3
MD08G1027600 Malus domestica HOM05D006275 ORTHO05D007839 1.3e-41 173.3 142 63.4
Carub.0002s2219 Capsella rubella HOM05D006275 ORTHO05D007839 1.7e-41 172.9 155 60.6
MD15G1023800 Malus domestica HOM05D006275 ORTHO05D007839 1.7e-41 172.9 143 65.0
SalBow7G2217 Salvia bowleyana HOM05D006275 ORTHO05D007839 1.7e-41 172.9 143 65.0
CsaV3_3G045380 Cucumis sativus L. HOM05D006275 ORTHO05D007839 2.2e-41 172.6 144 64.6
AT1G75350 Arabidopsis thaliana HOM05D006275 ORTHO05D007839 2.9e-41 172.2 149 61.7
MELO3C003811.2 Cucumis melo HOM05D006275 ORTHO05D007839 2.9e-41 172.2 144 64.6
Cc09_g08950 Coffea canephora HOM05D006275 ORTHO05D007839 3.8e-41 171.8 139 64.0
Nitab4.5_0003265g0060 Nicotiana tabacum HOM05D006275 ORTHO05D007839 5.0e-41 171.4 139 61.2
Solyc04g080630.4 Solanum lycopersicum HOM05D006275 ORTHO05D007839 5.0e-41 171.4 139 59.7
AUR62014497 Chenopodium quinoa HOM05D006275 ORTHO05D007839 8.5e-41 170.6 144 64.6
Sc02g0005820 Simmondsia chinensis HOM05D006275 ORTHO05D007839 8.5e-41 170.6 142 63.4
Oeu002824.1 Olea europaea HOM05D006275 ORTHO05D007839 1.1e-40 170.2 143 62.9
AUR62038041 Chenopodium quinoa HOM05D006275 ORTHO05D007839 2.5e-40 169.1 139 63.3
Nitab4.5_0009228g0020 Nicotiana tabacum HOM05D006275 ORTHO05D007839 2.5e-40 169.1 139 60.4
Oeu047769.1 Olea europaea HOM05D006275 ORTHO05D007839 2.5e-40 169.1 143 62.2
Sp5g30490 Schrenkiella parvula HOM05D006275 ORTHO05D007839 2.5e-40 169.1 151 59.6
Sabra02G0026900 Salix brachista HOM05D006275 ORTHO05D007839 3.2e-40 168.7 115 73.0
PGSC0003DMG400003696 Solanum tuberosum HOM05D006275 ORTHO05D007839 3.2e-40 168.7 139 59.7
Aa31LG4G5560 Aethionema arabicum HOM05D006275 ORTHO05D007839 5.5e-40 167.9 150 60.0
CANSAT56G0974 Cannabis sativa HOM05D006275 ORTHO05D007839 5.5e-40 167.9 142 66.9
Eucgr.F01878 Eucalyptus grandis HOM05D006275 ORTHO05D007839 5.5e-40 167.9 147 61.2
Aqoxy5G01584 Aquilegia oxysepala HOM05D006275 ORTHO05D007839 2.7e-39 165.6 144 63.2
TWI36G0893 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 3.6e-39 165.2 146 61.6
Phvul.001G012400 Phaseolus vulgaris HOM05D006275 ORTHO05D007839 4.7e-39 164.9 142 62.0
VMungo0647G0412 Vigna mungo HOM05D006275 ORTHO05D007839 4.7e-39 164.9 141 61.7
Lj5g0023115 Lotus japonicus HOM05D006275 ORTHO05D007839 6.1e-39 164.5 143 60.8
Medtr1g022450 Medicago truncatula HOM05D006275 ORTHO05D007839 6.1e-39 164.5 146 61.6
Ciclev10002669m.g Citrus clementina HOM05D006275 ORTHO05D007839 7.9e-39 164.1 142 62.0
arahy.Tifrunner.gnm1.ann1.RSD13X Arachis hypogaea HOM05D006275 ORTHO05D007839 1.0e-38 163.7 142 59.9
arahy.Tifrunner.gnm1.ann1.T5GRUU Arachis hypogaea HOM05D006275 ORTHO05D007839 1.0e-38 163.7 142 59.9
Ca_18049_v3 Cicer arietinum L. HOM05D006275 ORTHO05D007839 1.0e-38 163.7 144 59.0
Migut.N00484 Erythranthe guttata HOM05D006275 ORTHO05D007839 1.0e-38 163.7 143 60.8
SGA_v2.0_scaffold201G41391 Striga asiatica HOM05D006275 ORTHO05D007839 1.4e-38 163.3 145 62.1
arahy.Tifrunner.gnm1.ann1.W9L06J Arachis hypogaea HOM05D006275 ORTHO05D007839 8.8e-38 160.6 142 59.2
arahy.Tifrunner.gnm1.ann1.WR55YC Arachis hypogaea HOM05D006275 ORTHO05D007839 8.8e-38 160.6 142 59.2
DCAR_022467 Daucus carota HOM05D006275 ORTHO05D007839 2.6e-37 159.1 137 58.4
Psat6g009240 Pisum sativum HOM05D006275 ORTHO05D007839 2.6e-37 159.1 145 60.7
Cfa013858 Carpinus fangiana HOM05D006275 ORTHO05D007839 4.4e-37 158.3 115 67.8
Actinidia37997 Actinidia chinensis HOM05D006275 ORTHO05D007839 7.4e-37 157.5 132 63.6
Haze_22533 Corylus avellana HOM05D006275 ORTHO05D007839 7.4e-37 157.5 106 70.8
Atru.chr13.432 Acer truncatum HOM05D006275 ORTHO05D007839 2.2e-36 156.0 105 73.3
CDE06G0798 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 2.2e-36 156.0 145 60.7
CSS0039262 Camellia sinensis var. sinensis HOM05D006275 ORTHO05D007839 3.7e-36 155.2 142 57.7
Sopen04g034220 Solanum pennellii HOM05D006275 ORTHO05D007839 6.3e-36 154.5 102 68.6
CDE02G2235 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 8.2e-36 154.1 139 60.4
Glyma.14G072400 Glycine max HOM05D006275 ORTHO05D007839 8.2e-36 154.1 142 57.7
ATR0568G031 Amborella trichopoda HOM05D006275 ORTHO05D007839 1.1e-35 153.7 141 59.6
Glyma.17G252600 Glycine max HOM05D006275 ORTHO05D007839 1.1e-35 153.7 101 71.3
HPP92_009679 Vanilla planifolia HOM05D006275 ORTHO05D007839 2.4e-35 152.5 116 62.1
TPR.G20152 Trifolium pratense HOM05D006275 ORTHO05D007839 4.5e-34 148.3 135 59.3
Pp3c4_22510 Physcomitrium patens HOM05D006275 ORTHO05D007839 5.0e-33 144.8 146 54.1
FAN20G1429 Fragaria x ananassa HOM05D006275 ORTHO05D007839 8.5e-33 144.1 105 68.6
Pp3c13_7030 Physcomitrium patens HOM05D006275 ORTHO05D007839 4.7e-31 138.3 143 51.0
Pp3c3_430 Physcomitrium patens HOM05D006275 ORTHO05D007839 1.0e-30 137.1 131 54.2
Rhsim07G0241500 Rhododendron simsii HOM05D006275 ORTHO05D007839 5.2e-30 134.8 111 64.9
RhsimUnG0236400 Rhododendron simsii HOM05D006275 ORTHO05D007839 5.2e-30 134.8 111 64.9
vmacro04538 Vaccinium macrocarpon HOM05D006275 ORTHO05D007839 3.3e-29 132.1 100 65.0
Mapoly0051s0056 Marchantia polymorpha HOM05D006275 ORTHO05D007839 7.5e-29 131.0 125 56.0
AagrBONN_evm.TU.Sc2ySwM_368.2624 Anthoceros agrestis HOM05D006275 ORTHO05D007839 6.3e-28 127.9 104 60.6
Duzib041G0262 Durio zibethinus HOM05D006275 ORTHO05D007839 3.8e-25 118.6 78 74.4
CBR_g52135 Chara braunii HOM05D006275 ORTHO05D007839 6.5e-25 117.9 116 53.4
SEGI_04934 Sequoiadendron giganteum HOM05D006275 ORTHO05D007839 6.5e-25 117.9 102 56.9
SMO117G0016 Selaginella moellendorffii HOM05D006275 ORTHO05D007839 8.5e-25 117.5 116 52.6
QL02p009087 Quercus lobata HOM05D006275 ORTHO05D007839 6.1e-23 111.3 80 68.8
Os01g0633000 Oryza sativa ssp. japonica HOM05D006275 ORTHO05D007839 1.4e-22 110.2 110 52.7
Zm00001eb159080 Zea mays HOM05D006275 ORTHO05D007839 2.0e-21 106.3 107 51.4
BcaC09g48250 Brassica carinata HOM05D006275 ORTHO05D007839 8.3e-20 100.9 53 79.2
Gohir.D12G058400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 1.6e-18 96.7 77 66.2
Cre08.g365400 Chlamydomonas reinhardtii HOM05D006275 ORTHO05D007839 1.0e-17 94.0 136 41.9
Gorai.010G176600 Gossypium raimondii HOM05D006275 ORTHO05D007839 5.0e-17 91.7 78 65.4
MCO12G376 Micromonas commoda HOM05D006275 ORTHO05D007839 5.0e-17 91.7 70 55.7
TWI56G0783 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 2.0e-13 79.7 62 64.5
BcaC05g28396 Brassica carinata HOM05D006275 ORTHO05D003437 2.3e-09 66.2 55 61.8
Sabra05G0177600 Salix brachista HOM05D006275 ORTHO05D007839 5.6e-08 61.6 41 65.9


User provided reference genes

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