Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO729G0153 Papaver somniferum HOM05D013875 ORTHO05D000313 1.9e-223 778.9 402 100.0
PSO729G0107 Papaver somniferum HOM05D013875 ORTHO05D002268 4.6e-124 448.7 417 60.2
PSO729G0017 Papaver somniferum HOM05D013875 ORTHO05D002268 3.0e-99 366.3 420 50.7
PSO017G5793 Papaver somniferum HOM05D000017 ORTHO05D000013 2.8e-49 200.3 427 34.4
PSO017G0458 Papaver somniferum HOM05D000017 ORTHO05D000013 1.3e-22 111.7 185 35.7
PSO063G6971 Papaver somniferum HOM05D000480 ORTHO05D000313 1.3e-17 95.1 171 39.8
PSO782G5375 Papaver somniferum HOM05D000480 ORTHO05D000313 1.3e-14 85.1 139 41.0
EL10Ac5g12276 Beta vulgaris HOM05D000480 ORTHO05D000313 1.5e-13 81.6 140 32.9
Ah.07g199190 Amaranthus hybridus HOM05D000480 ORTHO05D000313 7.3e-13 79.3 133 33.8
CAN.G756.43 Capsicum annuum HOM05D000480 ORTHO05D000313 1.6e-12 78.2 164 32.9
TAR374G0103 Trochodendron aralioides HOM05D000480 ORTHO05D000313 5.2e-11 73.2 103 38.8
Manes.08G063800 Manihot esculenta HOM05D000480 ORTHO05D000313 1.5e-10 71.6 168 31.0
TAR374G0123 Trochodendron aralioides HOM05D000480 ORTHO05D000313 5.8e-10 69.7 103 38.8
Dinv44040 Davidia involucrata HOM05D000480 ORTHO05D000313 1.3e-09 68.6 93 40.9
TAR374G1225 Trochodendron aralioides HOM05D000480 ORTHO05D000313 2.2e-09 67.8 103 39.8
Thecc.03G145400 Theobroma cacao HOM05D000480 ORTHO05D000313 2.9e-09 67.4 141 32.6
TAR374G0158 Trochodendron aralioides HOM05D000480 ORTHO05D000313 2.9e-09 67.4 129 33.3
AUR62009250 Chenopodium quinoa HOM05D000448 ORTHO05D000291 6.4e-09 66.2 105 41.9
AUR62018843 Chenopodium quinoa HOM05D000480 ORTHO05D000313 6.4e-09 66.2 92 37.0
Duzib106G0542 Durio zibethinus HOM05D000480 ORTHO05D000313 6.4e-09 66.2 168 29.2
A05p04880 Brassica napus HOM05D000480 ORTHO05D000313 8.3e-09 65.9 100 40.0
BraA05t19462Z Brassica rapa HOM05D000480 ORTHO05D000313 8.3e-09 65.9 100 40.0
BcaC02g12277 Brassica carinata HOM05D000480 ORTHO05D000313 1.1e-08 65.5 100 38.0
C04p05700 Brassica napus HOM05D000480 ORTHO05D000313 1.1e-08 65.5 100 38.0
Duzib084G0671 Durio zibethinus HOM05D000480 ORTHO05D000313 1.1e-08 65.5 163 29.4
BolC4t22200H Brassica oleracea HOM05D000480 ORTHO05D000313 1.4e-08 65.1 100 39.0
Cpa.g.sc277.6 Carica papaya HOM05D000448 ORTHO05D000291 1.9e-08 64.7 100 36.0
TAR374G1496 Trochodendron aralioides HOM05D000480 ORTHO05D000313 1.9e-08 64.7 142 33.1
Duzib205G1806 Durio zibethinus HOM05D000480 ORTHO05D000313 3.2e-08 63.9 135 31.1
Eucgr.L00134 Eucalyptus grandis HOM05D000480 ORTHO05D000313 3.2e-08 63.9 91 35.2
BcaC02g12278 Brassica carinata HOM05D000480 ORTHO05D000313 4.1e-08 63.5 89 39.3
CANSAT21G1221 Cannabis sativa HOM05D000480 ORTHO05D000313 4.1e-08 63.5 168 26.8
Thhalv10001799m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 4.1e-08 63.5 101 35.6
Rhsim05G0056400 Rhododendron simsii HOM05D000264 ORTHO05D000152 4.1e-08 63.5 135 30.4
Sp4g26790 Schrenkiella parvula HOM05D000480 ORTHO05D015936 4.1e-08 63.5 89 40.4
Atru.chr11.181 Acer truncatum HOM05D000480 ORTHO05D000313 5.4e-08 63.2 164 25.6
CANSAT25G2306 Cannabis sativa HOM05D000448 ORTHO05D000291 5.4e-08 63.2 164 29.3
CARHR223630 Cardamine hirsuta HOM05D000480 ORTHO05D000313 5.4e-08 63.2 95 35.8
AUR62009246 Chenopodium quinoa HOM05D000448 ORTHO05D000291 5.4e-08 63.2 105 38.1
BcaB02g08852 Brassica carinata HOM05D000480 ORTHO05D000313 7.1e-08 62.8 100 38.0
AUR62007163 Chenopodium quinoa HOM05D000480 ORTHO05D000313 1.2e-07 62.0 92 35.9
Carub.0004s2729 Capsella rubella HOM05D000480 ORTHO05D000313 2.1e-07 61.2 196 26.0
HanXRQChr16g0523041 Helianthus annuus HOM05D000448 ORTHO05D000291 2.7e-07 60.8 103 33.0
Lj5A330G31 Lonicera japonica HOM05D000264 ORTHO05D000152 3.5e-07 60.5 126 31.0
QL01p009236 Quercus lobata HOM05D000480 ORTHO05D000313 3.5e-07 60.5 95 34.7
QL04p000599 Quercus lobata HOM05D000480 ORTHO05D000313 3.5e-07 60.5 108 31.5
Lj3g0016586 Lotus japonicus HOM05D000480 ORTHO05D000313 6.0e-07 59.7 76 42.1
HanXRQChr16g0523061 Helianthus annuus HOM05D000448 ORTHO05D000291 7.8e-07 59.3 103 32.0
Lj3A768T6 Lonicera japonica HOM05D000480 ORTHO05D000313 7.8e-07 59.3 89 37.1
QL04p002118 Quercus lobata HOM05D000480 ORTHO05D000313 1.0e-06 58.9 93 33.3
TWI23G1193 Tripterygium wilfordii HOM05D000480 ORTHO05D000313 1.0e-06 58.9 93 35.5
AUR62008891 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.3e-06 58.5 166 30.7
Dinv25130 Davidia involucrata HOM05D000480 ORTHO05D000313 1.3e-06 58.5 90 36.7
Duzib205G0304 Durio zibethinus HOM05D000480 ORTHO05D000313 1.3e-06 58.5 139 29.5
BraA09t41900Z Brassica rapa HOM05D000480 ORTHO05D000313 1.7e-06 58.2 119 31.1
CiPaw.14G018700 Carya illinoinensis HOM05D000480 ORTHO05D000313 1.7e-06 58.2 89 37.1
MD04G1235200 Malus domestica HOM05D000480 ORTHO05D000313 1.7e-06 58.2 103 32.0
Manes.09G064600 Manihot esculenta HOM05D000480 ORTHO05D000313 1.7e-06 58.2 138 32.6
Sp4g05120 Schrenkiella parvula HOM05D000480 ORTHO05D015936 1.7e-06 58.2 90 36.7
CANSAT25G3728 Cannabis sativa HOM05D000480 ORTHO05D000313 2.3e-06 57.8 142 30.3
CiPaw.14G019200 Carya illinoinensis HOM05D000480 ORTHO05D000313 2.3e-06 57.8 89 37.1
vmacro04094 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 2.3e-06 57.8 132 31.1
Aa31LG2G13160 Aethionema arabicum HOM05D000480 ORTHO05D000313 3.0e-06 57.4 90 35.6
BcaC07g41900 Brassica carinata HOM05D000480 ORTHO05D000313 3.0e-06 57.4 119 31.1
BolC8t52491H Brassica oleracea HOM05D000480 ORTHO05D000313 3.0e-06 57.4 119 31.1
Hma1.2p1_0672F.1_g200820 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 3.9e-06 57.0 83 36.1
Manes.09G064501 Manihot esculenta HOM05D000480 ORTHO05D000313 3.9e-06 57.0 134 34.3
Medtr3g105650 Medicago truncatula HOM05D000480 ORTHO05D000313 3.9e-06 57.0 81 39.5
Sabra19G0112700 Salix brachista HOM05D000264 ORTHO05D000152 3.9e-06 57.0 186 28.0
Actinidia25703 Actinidia chinensis HOM05D000448 ORTHO05D000291 5.1e-06 56.6 161 28.0
Eucgr.C03399 Eucalyptus grandis HOM05D000448 ORTHO05D000291 5.1e-06 56.6 144 32.6
FAN24G3054 Fragaria x ananassa HOM05D000448 ORTHO05D000291 5.1e-06 56.6 88 38.6
BcaC05g25356 Brassica carinata HOM05D000480 ORTHO05D000313 6.6e-06 56.2 89 33.7
A06p10540 Brassica napus HOM05D000480 ORTHO05D000313 6.6e-06 56.2 89 33.7
C05p12410 Brassica napus HOM05D000480 ORTHO05D000313 6.6e-06 56.2 89 33.7
BraA06t24234Z Brassica rapa HOM05D000480 ORTHO05D000313 6.6e-06 56.2 89 33.7
Medtr8g072510 Medicago truncatula HOM05D000480 ORTHO05D000313 6.6e-06 56.2 85 36.5
Psat4g105000 Pisum sativum HOM05D000480 ORTHO05D000313 6.6e-06 56.2 85 35.3
Sabra19G0111500 Salix brachista HOM05D000264 ORTHO05D000152 6.6e-06 56.2 158 29.1
ATR0705G165 Amborella trichopoda HOM05D000480 ORTHO05D000313 8.6e-06 55.8 104 33.7
BcaB05g22330 Brassica carinata HOM05D000480 ORTHO05D000313 8.6e-06 55.8 91 34.1
BraA09t36340Z Brassica rapa HOM05D000480 ORTHO05D000313 8.6e-06 55.8 91 35.2
CARHR255620 Cardamine hirsuta HOM05D000480 ORTHO05D000313 8.6e-06 55.8 86 31.4


User provided reference genes

Program Settings