Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 8.6e-93 343.6 167 100.0
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 7.1e-79 297.4 167 88.6
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 1.2e-78 296.6 167 88.0
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 3.5e-78 295.0 165 88.5
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 1.7e-64 249.6 170 74.7
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 4.9e-64 248.1 169 71.0
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 2.4e-63 245.7 172 70.9
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 2.4e-63 245.7 168 70.8
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 2.4e-63 245.7 172 69.8
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 2.4e-63 245.7 169 72.8
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 4.2e-63 245.0 168 72.0
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 5.4e-63 244.6 171 71.9
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 7.1e-63 244.2 169 72.8
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 7.1e-63 244.2 171 69.6
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 2.1e-62 242.7 170 70.6
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 2.1e-62 242.7 170 69.4
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 2.1e-62 242.7 170 71.2
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 2.7e-62 242.3 170 71.8
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 4.6e-62 241.5 169 69.2
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 4.6e-62 241.5 172 68.6
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 6.0e-62 241.1 172 69.2
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 7.9e-62 240.7 170 71.2
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 3.0e-61 238.8 172 68.0
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 3.9e-61 238.4 170 71.8
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 6.7e-61 237.7 167 70.1
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 1.5e-60 236.5 171 69.0
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 1.9e-60 236.1 165 67.9
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 1.9e-60 236.1 170 70.0
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 1.9e-60 236.1 170 70.0
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 2.5e-60 235.7 168 69.0
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 3.3e-60 235.3 169 68.0
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 3.3e-60 235.3 168 69.0
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 4.3e-60 235.0 168 69.0
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 5.6e-60 234.6 168 66.1
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 9.6e-60 233.8 174 68.4
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 9.6e-60 233.8 165 67.3
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.3e-59 233.4 168 68.5
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 1.6e-59 233.0 171 67.8
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 3.7e-59 231.9 170 67.1
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 4.8e-59 231.5 170 67.6
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 4.8e-59 231.5 169 67.5
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 6.2e-59 231.1 172 65.7
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 6.2e-59 231.1 172 65.7
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 1.4e-58 229.9 170 67.6
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 1.8e-58 229.6 169 67.5
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 3.1e-58 228.8 165 68.5
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 3.1e-58 228.8 169 66.9
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 3.1e-58 228.8 170 64.1
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 3.1e-58 228.8 168 66.1
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 5.3e-58 228.0 169 67.5
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 5.3e-58 228.0 168 66.1
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 5.3e-58 228.0 170 65.3
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 2.6e-57 225.7 169 66.9
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 2.6e-57 225.7 170 66.5
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 3.4e-57 225.3 169 63.9
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 1.7e-56 223.0 168 64.3
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 3.8e-56 221.9 169 65.1
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 4.9e-56 221.5 168 64.3
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 4.9e-56 221.5 169 63.3
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 6.4e-56 221.1 169 68.6
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 3.2e-55 218.8 170 63.5
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 4.2e-55 218.4 168 61.3
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 4.2e-55 218.4 169 62.7
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 4.2e-55 218.4 170 63.5
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 4.2e-55 218.4 158 67.7
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 7.1e-55 217.6 170 64.7
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 9.3e-55 217.2 170 64.1
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 1.6e-54 216.5 168 61.9
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 2.1e-54 216.1 168 64.3
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 2.7e-54 215.7 168 61.3
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 6.0e-54 214.5 163 63.2
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 1.0e-53 213.8 170 63.5
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 2.3e-53 212.6 170 61.2
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 2.3e-53 212.6 171 63.2
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 5.1e-53 211.5 165 60.6
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 5.1e-53 211.5 164 62.8
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 5.1e-53 211.5 170 62.9
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 1.1e-52 210.3 165 62.4
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 1.9e-52 209.5 169 60.9
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 2.5e-52 209.1 169 63.3
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 3.3e-52 208.8 165 61.8
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 2.4e-50 202.6 169 61.5
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 3.4e-49 198.7 166 60.2
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 1.3e-48 196.8 148 64.9
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 2.2e-48 196.1 165 59.4
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 8.4e-48 194.1 166 57.2
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 1.1e-47 193.7 166 57.2
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 6.0e-46 188.0 172 58.7
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 5.1e-45 184.9 144 61.8
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 5.1e-45 184.9 168 55.4
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 4.3e-44 181.8 144 61.1
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 2.2e-43 179.5 168 54.2
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 4.8e-43 178.3 172 58.1
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 8.2e-43 177.6 145 60.0
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 2.0e-41 172.9 163 51.5
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 3.4e-41 172.2 172 58.1
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 5.9e-41 171.4 121 71.1
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 1.0e-40 170.6 172 56.4
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 2.2e-40 169.5 145 60.0
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 3.8e-40 168.7 132 66.7
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 1.1e-39 167.2 169 54.4
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 1.2e-38 163.7 155 57.4
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 3.6e-38 162.2 172 46.5
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 3.6e-38 162.2 168 47.0
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 2.3e-37 159.5 166 53.0
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 8.8e-37 157.5 174 51.7
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 1.5e-36 156.8 176 51.7
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.1e-34 150.6 121 61.2
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 5.3e-34 148.3 145 53.8
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 5.5e-31 138.3 170 42.9
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 5.7e-28 128.3 88 73.9
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 1.7e-27 126.7 158 43.7
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 3.1e-26 122.5 166 46.4
ATR0681G271 Amborella trichopoda HOM05D006801 ORTHO05D008490 3.4e-25 119.0 92 66.3
Hma1.2p1_0501F.1_g167640 Hydrangea macrophylla HOM05D006801 ORTHO05D008490 2.1e-22 109.8 108 53.7
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 6.1e-22 108.2 132 48.5
Prupe.1G005200 Prunus persica HOM05D006801 ORTHO05D008490 2.2e-16 89.7 159 37.7
FAN05G3081 Fragaria x ananassa HOM05D000734 ORTHO05D002223 6.7e-13 78.2 44 75.0
ATR0681G235 Amborella trichopoda HOM05D006801 ORTHO05D008490 2.0e-09 66.6 52 59.6
Actinidia20750 Actinidia chinensis HOM05D006801 ORTHO05D008490 1.0e-08 64.3 124 34.7


User provided reference genes

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