Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO724G1385 Papaver somniferum HOM05D008314 ORTHO05D010369 1.0e-48 196.4 101 100.0
PSO135G0082 Papaver somniferum HOM05D008314 ORTHO05D010369 1.9e-42 175.6 101 91.1
Cpa.g.sc25.184 Carica papaya HOM05D008314 ORTHO05D010369 3.7e-14 81.6 83 54.2
TAR070G0001 Trochodendron aralioides HOM05D008314 ORTHO05D010369 3.1e-13 78.6 83 59.0
SalBow6G0833 Salvia bowleyana HOM05D008314 ORTHO05D010369 5.3e-13 77.8 83 56.6
Dinv37824 Davidia involucrata HOM05D008314 ORTHO05D010369 1.6e-12 76.3 84 52.4
Cc04_g00790 Coffea canephora HOM05D008314 ORTHO05D010369 5.9e-12 74.3 100 46.0
RcHm_v2.0_Chr2g0147741 Rosa chinensis HOM05D008314 ORTHO05D010369 5.9e-12 74.3 83 39.8
Thecc.03G325500 Theobroma cacao HOM05D008314 ORTHO05D010369 7.7e-12 73.9 84 48.8
TWI14G0587 Tripterygium wilfordii HOM05D008314 ORTHO05D010369 1.0e-11 73.6 95 48.4
Sed0005090 Sechium edule HOM05D008314 ORTHO05D010369 1.3e-11 73.2 80 48.8
MELO3C024311.2 Cucumis melo HOM05D008314 ORTHO05D010369 1.7e-11 72.8 81 48.1
CsaV3_7G033990 Cucumis sativus L. HOM05D008314 ORTHO05D010369 1.7e-11 72.8 77 49.4
Rhsim12G0213100 Rhododendron simsii HOM05D008314 ORTHO05D010369 1.7e-11 72.8 84 47.6
Lalb_Chr17g0343301 Lupinus albus HOM05D008314 ORTHO05D010369 2.2e-11 72.4 78 44.9
Atru.chr1.4110 Acer truncatum HOM05D008314 ORTHO05D010369 2.9e-11 72.0 86 48.8
FAN09G4263 Fragaria x ananassa HOM05D008314 ORTHO05D010369 2.9e-11 72.0 87 43.7
Nn6g35721 Nelumbo nucifera HOM05D008314 ORTHO05D010369 2.9e-11 72.0 85 50.6
QL05p001376 Quercus lobata HOM05D008314 ORTHO05D010369 2.9e-11 72.0 84 52.4
Thecc.06G129300 Theobroma cacao HOM05D008314 ORTHO05D010369 3.8e-11 71.6 83 45.8
CSS0041009 Camellia sinensis var. sinensis HOM05D008314 ORTHO05D010369 6.5e-11 70.9 84 51.2
ClCG09G001340 Citrullus lanatus HOM05D008314 ORTHO05D010369 6.5e-11 70.9 81 49.4
Duzib235G1505 Durio zibethinus HOM05D008314 ORTHO05D010369 6.5e-11 70.9 76 50.0
FvH4_6g35740 Fragaria vesca HOM05D008314 ORTHO05D010369 6.5e-11 70.9 87 42.5
FAN05G1710 Fragaria x ananassa HOM05D008314 ORTHO05D010369 6.5e-11 70.9 87 43.7
Oeu008398.2 Olea europaea HOM05D008314 ORTHO05D010369 6.5e-11 70.9 86 52.3
Duzib160G0115 Durio zibethinus HOM05D008314 ORTHO05D010369 8.5e-11 70.5 82 50.0
Oeu059021.1 Olea europaea HOM05D008314 ORTHO05D010369 8.5e-11 70.5 84 47.6
ATR0099G003 Amborella trichopoda HOM05D008314 ORTHO05D010369 1.1e-10 70.1 75 52.0
Gorai.010G173500 Gossypium raimondii HOM05D008314 ORTHO05D010369 1.1e-10 70.1 37 75.7
Prupe.3G031600 Prunus persica HOM05D008314 ORTHO05D010369 1.1e-10 70.1 84 47.6
MBI13_g01687_MAGBIO Magnolia biondii HOM05D008314 ORTHO05D010369 1.5e-10 69.7 39 76.9
COL.COLO4_30857 Corchorus olitorius HOM05D008314 ORTHO05D010369 1.9e-10 69.3 50 60.0
Psat4g165800 Pisum sativum HOM05D008314 ORTHO05D010369 1.9e-10 69.3 61 57.4
Gohir.A06G143350 Gossypium hirsutum HOM05D008314 ORTHO05D010369 3.2e-10 68.6 57 52.6
Gohir.D06G149000 Gossypium hirsutum HOM05D008314 ORTHO05D010369 4.2e-10 68.2 82 45.1
AUR62001414 Chenopodium quinoa HOM05D008314 ORTHO05D010369 5.5e-10 67.8 86 39.5
FAN02G2954 Fragaria x ananassa HOM05D008314 ORTHO05D010369 5.5e-10 67.8 78 43.6
Actinidia24433 Actinidia chinensis HOM05D008314 ORTHO05D010369 7.2e-10 67.4 84 44.0
Potri.003G072000 Populus trichocarpa HOM05D008314 ORTHO05D010369 1.2e-09 66.6 84 40.5
Medtr8g022990 Medicago truncatula HOM05D008314 ORTHO05D010369 1.6e-09 66.2 57 54.4
AUR62025623 Chenopodium quinoa HOM05D008314 ORTHO05D010369 3.6e-09 65.1 83 41.0
CiPaw.01G212000 Carya illinoinensis HOM05D008314 ORTHO05D010369 1.4e-08 63.2 94 41.5
MD09G1173500 Malus domestica HOM05D008314 ORTHO05D010369 1.4e-08 63.2 82 43.9
SEGI_28829 Sequoiadendron giganteum HOM05D008314 ORTHO05D010369 1.8e-08 62.8 36 61.1
Manes.11G013300 Manihot esculenta HOM05D008314 ORTHO05D010369 2.3e-08 62.4 85 42.4
Ciclev10027008m.g Citrus clementina HOM05D008314 ORTHO05D010369 4.0e-08 61.6 84 41.7
arahy.Tifrunner.gnm1.ann1.K03VIU Arachis hypogaea HOM05D008314 ORTHO05D010369 5.2e-08 61.2 87 40.2
CiPaw.01G212100 Carya illinoinensis HOM05D008314 ORTHO05D010369 8.8e-08 60.5 87 40.2
Ciclev10026853m.g Citrus clementina HOM05D008314 ORTHO05D010369 8.8e-08 60.5 83 44.6
Duzib160G0571 Durio zibethinus HOM05D008314 ORTHO05D010369 8.8e-08 60.5 83 48.2
arahy.Tifrunner.gnm1.ann1.0KI29H Arachis hypogaea HOM05D008314 ORTHO05D010369 1.1e-07 60.1 87 40.2
Phvul.010G123800 Phaseolus vulgaris HOM05D008314 ORTHO05D010369 1.1e-07 60.1 82 41.5
Os02g0564600 Oryza sativa ssp. japonica HOM05D008314 ORTHO05D010369 1.5e-07 59.7 37 64.9
Glyma.16G013200 Glycine max HOM05D008314 ORTHO05D010369 2.0e-07 59.3 81 39.5
Rhsim08G0244000 Rhododendron simsii HOM05D008314 ORTHO05D010369 2.6e-07 58.9 90 38.9
Zm00001eb019440 Zea mays HOM05D008314 ORTHO05D010369 5.7e-07 57.8 46 54.3
FAN27G2215 Fragaria x ananassa HOM05D002087 ORTHO05D002101 9.7e-07 57.0 84 46.4
Eucgr.H01103 Eucalyptus grandis HOM05D002087 ORTHO05D002101 1.3e-06 56.6 81 44.4
AT4G02380 Arabidopsis thaliana HOM05D002087 ORTHO05D002101 2.8e-06 55.5 83 38.6
Oeu059020.1 Olea europaea HOM05D008314 ORTHO05D010369 2.8e-06 55.5 41 53.7
FvH4_2g25860 Fragaria vesca HOM05D002087 ORTHO05D002101 3.7e-06 55.1 84 45.2
FAN15G0957 Fragaria x ananassa HOM05D002087 ORTHO05D002101 3.7e-06 55.1 84 45.2
FAN24G1387 Fragaria x ananassa HOM05D002087 ORTHO05D002101 3.7e-06 55.1 84 45.2
SEGI_18497 Sequoiadendron giganteum HOM05D042000 ORTHO05D010369 3.7e-06 55.1 34 64.7
Eucgr.H01104 Eucalyptus grandis HOM05D002087 ORTHO05D002101 6.3e-06 54.3 83 41.0


User provided reference genes

Program Settings