Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO724G1315 Papaver somniferum HOM05D003858 ORTHO05D005878 9.1e-262 906.4 455 100.0
PSO423G0213 Papaver somniferum HOM05D003858 ORTHO05D005878 2.6e-224 781.9 464 87.5
PSO170G3101 Papaver somniferum HOM05D003858 ORTHO05D005878 8.7e-180 634.0 459 73.2
PSO170G6136 Papaver somniferum HOM05D003858 ORTHO05D005878 9.7e-163 577.4 484 67.4
PSO017G3328 Papaver somniferum HOM05D003858 ORTHO05D005878 1.3e-151 540.4 501 63.7
PSO478G4955 Papaver somniferum HOM05D003858 ORTHO05D005878 3.2e-150 535.8 501 63.1
PSO063G1302 Papaver somniferum HOM05D003858 ORTHO05D005878 7.4e-139 498.0 280 88.2
Cc10_g13400 Coffea canephora HOM05D003858 ORTHO05D005878 2.0e-136 490.0 507 57.6
Gohir.D03G114300 Gossypium hirsutum HOM05D003858 ORTHO05D005878 2.6e-136 489.6 503 58.3
CDE05G2345 Ceratophyllum demersum HOM05D003858 ORTHO05D005878 6.5e-135 485.0 495 56.8
Thecc.03G129000 Theobroma cacao HOM05D003858 ORTHO05D005878 8.5e-135 484.6 503 56.9
Gorai.003G120600 Gossypium raimondii HOM05D003858 ORTHO05D005878 3.2e-134 482.6 501 57.1
CSS0032323 Camellia sinensis var. sinensis HOM05D003858 ORTHO05D005878 5.5e-134 481.9 507 56.4
COL.COLO4_28121 Corchorus olitorius HOM05D003858 ORTHO05D005878 5.5e-134 481.9 510 56.3
Duzib205G0757 Durio zibethinus HOM05D003858 ORTHO05D005878 7.2e-134 481.5 500 56.8
Rhsim10G0051500 Rhododendron simsii HOM05D003858 ORTHO05D005878 9.4e-134 481.1 491 57.8
Actinidia08869 Actinidia chinensis HOM05D003858 ORTHO05D005878 1.2e-133 480.7 366 69.1
SalBow6G4120 Salvia bowleyana HOM05D003858 ORTHO05D005878 1.2e-133 480.7 497 57.3
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 2.1e-133 479.9 488 57.0
Rhsim12G0174400 Rhododendron simsii HOM05D003858 ORTHO05D005878 4.7e-133 478.8 490 57.6
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 4.7e-133 478.8 491 56.8
AUR62028258 Chenopodium quinoa HOM05D003858 ORTHO05D005878 8.0e-133 478.0 364 69.5
Lalb_Chr01g0021111 Lupinus albus HOM05D003858 ORTHO05D005878 8.0e-133 478.0 484 58.5
Gohir.A03G052800 Gossypium hirsutum HOM05D003858 ORTHO05D005878 1.4e-132 477.2 503 57.3
TAR371G0204 Trochodendron aralioides HOM05D003858 ORTHO05D005878 1.8e-132 476.9 505 56.6
Migut.N03254 Erythranthe guttata HOM05D003858 ORTHO05D005878 3.0e-132 476.1 377 66.6
Nitab4.5_0005642g0040 Nicotiana tabacum HOM05D003858 ORTHO05D005878 4.0e-132 475.7 358 69.8
Manes.06G119400 Manihot esculenta HOM05D003858 ORTHO05D005878 5.2e-132 475.3 500 57.2
Phvul.008G067600 Phaseolus vulgaris HOM05D003858 ORTHO05D005878 5.2e-132 475.3 369 67.2
vmacro16677 Vaccinium macrocarpon HOM05D003858 ORTHO05D005878 5.2e-132 475.3 365 68.2
Nn4g22329 Nelumbo nucifera HOM05D003858 ORTHO05D005878 6.7e-132 474.9 501 57.3
SGA_v2.0_scaffold2G01192 Striga asiatica HOM05D003858 ORTHO05D005878 6.7e-132 474.9 489 57.9
Hma1.2p1_0014F.1_g009460 Hydrangea macrophylla HOM05D003858 ORTHO05D005878 1.2e-131 474.2 492 56.5
Peaxi162Scf00119g00520 Petunia axillaris HOM05D003858 ORTHO05D005878 1.2e-131 474.2 358 70.1
arahy.Tifrunner.gnm1.ann1.L81EPG Arachis hypogaea HOM05D003858 ORTHO05D005878 2.0e-131 473.4 502 55.4
HanXRQChr02g0034711 Helianthus annuus HOM05D003858 ORTHO05D005878 2.0e-131 473.4 493 56.6
Nitab4.5_0006042g0010 Nicotiana tabacum HOM05D003858 ORTHO05D005878 2.0e-131 473.4 358 69.8
CiPaw.12G042900 Carya illinoinensis HOM05D003858 ORTHO05D005878 3.3e-131 472.6 488 55.5
CiPaw.15G056500 Carya illinoinensis HOM05D003858 ORTHO05D005878 3.3e-131 472.6 496 56.2
Dinv23145 Davidia involucrata HOM05D003858 ORTHO05D005878 4.4e-131 472.2 500 56.2
Sopen08g029150 Solanum pennellii HOM05D003858 ORTHO05D005878 1.7e-130 470.3 357 69.7
CAN.G774.2 Capsicum annuum HOM05D003858 ORTHO05D005878 2.8e-130 469.5 362 68.8
DCAR_001872 Daucus carota HOM05D003858 ORTHO05D005878 2.8e-130 469.5 499 56.1
arahy.Tifrunner.gnm1.ann1.LEEI49 Arachis hypogaea HOM05D003858 ORTHO05D005878 4.8e-130 468.8 491 54.8
Glyma.09G261800 Glycine max HOM05D003858 ORTHO05D005878 6.3e-130 468.4 369 67.2
CANSAT80G0729 Cannabis sativa HOM05D003858 ORTHO05D005878 1.4e-129 467.2 489 56.6
Cpa.g.sc250.13 Carica papaya HOM05D003858 ORTHO05D005878 1.4e-129 467.2 488 55.5
CsaV3_1G007630 Cucumis sativus L. HOM05D003858 ORTHO05D005878 1.4e-129 467.2 374 65.5
SGA_v2.0_scaffold28G11963 Striga asiatica HOM05D003858 ORTHO05D005878 2.4e-129 466.5 486 56.8
Sed0027713 Sechium edule HOM05D003858 ORTHO05D005878 4.1e-129 465.7 505 55.6
TWI23G0194 Tripterygium wilfordii HOM05D003858 ORTHO05D005878 4.1e-129 465.7 499 54.7
Atru.chr9.1128 Acer truncatum HOM05D003858 ORTHO05D005878 7.0e-129 464.9 373 66.2
Potri.015G096100 Populus trichocarpa HOM05D003858 ORTHO05D005878 9.1e-129 464.5 494 55.5
Aa31sc86G50 Aethionema arabicum HOM05D003858 ORTHO05D005878 1.2e-128 464.2 373 64.6
Cfa015653 Carpinus fangiana HOM05D003858 ORTHO05D005878 1.2e-128 464.2 490 55.5
Glyma.18G230300 Glycine max HOM05D003858 ORTHO05D005878 1.6e-128 463.8 455 59.1
Lsat_1_v5_gn_1_28960 Lactuca sativa HOM05D003858 ORTHO05D005878 1.6e-128 463.8 415 63.1
PGR004G1062 Punica granatum HOM05D003858 ORTHO05D005878 1.6e-128 463.8 500 55.2
Hund02439 Selenicereus undatus HOM05D003858 ORTHO05D005878 1.6e-128 463.8 501 54.9
Solyc08g080850.4 Solanum lycopersicum HOM05D003858 ORTHO05D005878 1.6e-128 463.8 495 56.4
Lj1g0027711 Lotus japonicus HOM05D003858 ORTHO05D005878 2.0e-128 463.4 373 65.7
EL10Ac9g21903 Beta vulgaris HOM05D003858 ORTHO05D005878 3.5e-128 462.6 421 61.3
Sabra15G0116900 Salix brachista HOM05D003858 ORTHO05D005878 4.5e-128 462.2 489 56.0
PGSC0003DMG400012349 Solanum tuberosum HOM05D003858 ORTHO05D005878 5.9e-128 461.8 498 55.8
Oeu001550.1 Olea europaea HOM05D003858 ORTHO05D005878 7.7e-128 461.5 382 65.4
ECA247G4076 Erigeron canadensis HOM05D003858 ORTHO05D005878 2.2e-127 459.9 494 54.0
QL10p002959 Quercus lobata HOM05D003858 ORTHO05D005878 2.2e-127 459.9 497 56.5
Ah.01g020640 Amaranthus hybridus HOM05D003858 ORTHO05D005878 2.9e-127 459.5 510 55.1
Haze_09759 Corylus avellana HOM05D003858 ORTHO05D005878 5.0e-127 458.8 504 55.0
MELO3C002182.2 Cucumis melo HOM05D003858 ORTHO05D005878 8.5e-127 458.0 500 54.6
Aqoxy3G00800 Aquilegia oxysepala HOM05D003858 ORTHO05D005878 1.5e-126 457.2 505 54.7
Haze_07135 Corylus avellana HOM05D003858 ORTHO05D005878 3.2e-126 456.1 498 54.8
Sc10g0010460 Simmondsia chinensis HOM05D003858 ORTHO05D005878 5.5e-126 455.3 490 55.7
BcaC02g08384 Brassica carinata HOM05D003858 ORTHO05D005878 2.1e-125 453.4 357 65.3
C04p54940 Brassica napus HOM05D003858 ORTHO05D005878 2.1e-125 453.4 357 65.3
Sp4g03970 Schrenkiella parvula HOM05D003858 ORTHO05D005878 3.6e-125 452.6 478 54.8
BraA04t17533Z Brassica rapa HOM05D003858 ORTHO05D005878 4.7e-125 452.2 357 65.3
THA.LOC104800505 Tarenaya hassleriana HOM05D003858 ORTHO05D005878 6.1e-125 451.8 373 63.3
HPP92_020969 Vanilla planifolia HOM05D003858 ORTHO05D005878 8.0e-125 451.4 356 64.0
Thhalv10000120m.g Eutrema salsugineum HOM05D003858 ORTHO05D005878 1.4e-124 450.7 357 65.0
DCAR_021618 Daucus carota HOM05D003858 ORTHO05D005878 1.8e-124 450.3 536 51.9
TPR.G2433 Trifolium pratense HOM05D003858 ORTHO05D005878 1.8e-124 450.3 471 55.4
AL4G16080 Arabidopsis lyrata HOM05D003858 ORTHO05D005878 4.0e-124 449.1 481 55.1
BcaB06g28028 Brassica carinata HOM05D003858 ORTHO05D005878 4.0e-124 449.1 372 63.2
Lj5C96T4 Lonicera japonica HOM05D003858 ORTHO05D005878 4.0e-124 449.1 485 55.7
FvH4_5g08310 Fragaria vesca HOM05D003858 ORTHO05D005878 1.5e-123 447.2 493 53.3
AT5G37350 Arabidopsis thaliana HOM05D003858 ORTHO05D005878 2.6e-123 446.4 476 55.3
FAN08G1590 Fragaria x ananassa HOM05D003858 ORTHO05D005878 2.6e-123 446.4 493 53.3
VMungo1383G3568 Vigna mungo HOM05D003858 ORTHO05D005878 5.7e-123 445.3 440 57.0
Zm00001eb103140 Zea mays HOM05D003858 ORTHO05D005878 7.5e-123 444.9 365 62.5
A04p19370 Brassica napus HOM05D003858 ORTHO05D005878 9.8e-123 444.5 482 53.9
AT2G24990 Arabidopsis thaliana HOM05D003858 ORTHO05D005878 2.2e-122 443.4 481 54.9
Eucgr.E01497 Eucalyptus grandis HOM05D003858 ORTHO05D005878 2.8e-122 443.0 486 54.7
Carub.0004s0455 Capsella rubella HOM05D003858 ORTHO05D005878 1.1e-121 441.0 474 54.4
MD14G1157300 Malus domestica HOM05D003858 ORTHO05D005878 5.4e-121 438.7 498 53.2
Psat3g110800 Pisum sativum HOM05D003858 ORTHO05D005878 5.4e-121 438.7 466 54.1
Medtr7g090710 Medicago truncatula HOM05D003858 ORTHO05D005878 1.2e-120 437.6 393 60.6
RcHm_v2.0_Chr7g0190211 Rosa chinensis HOM05D003858 ORTHO05D005878 1.2e-120 437.6 486 53.1
CARHR116740 Cardamine hirsuta HOM05D003858 ORTHO05D005878 1.6e-120 437.2 472 54.9
Zm00001eb256840 Zea mays HOM05D003858 ORTHO05D005878 1.6e-120 437.2 496 52.2
Os07g0162300 Oryza sativa ssp. japonica HOM05D003858 ORTHO05D005878 2.0e-120 436.8 455 53.8
Prupe.5G151200 Prunus persica HOM05D003858 ORTHO05D005878 5.0e-119 432.2 494 51.6
VMungo1383G2243 Vigna mungo HOM05D003858 ORTHO05D005878 1.9e-118 430.3 491 53.8
BolC4t27030H Brassica oleracea HOM05D003858 ORTHO05D005878 5.5e-118 428.7 478 53.1
Aa31LG8G17300 Aethionema arabicum HOM05D003858 ORTHO05D005878 1.8e-116 423.7 474 53.4
ATR0559G302 Amborella trichopoda HOM05D003858 ORTHO05D005878 2.3e-116 423.3 510 49.8
SEGI_19941 Sequoiadendron giganteum HOM05D003858 ORTHO05D005878 2.6e-115 419.9 346 61.0
AUR62007839 Chenopodium quinoa HOM05D003858 ORTHO05D005878 9.8e-115 417.9 367 63.2
SalBow7G4372 Salvia bowleyana HOM05D003858 ORTHO05D005878 1.7e-114 417.2 516 51.9
PSO724G0964 Papaver somniferum HOM05D003858 ORTHO05D005878 6.3e-114 415.2 494 55.7
PSO421G0376 Papaver somniferum HOM05D003858 ORTHO05D015239 9.2e-113 411.4 347 66.9
PSO724G1140 Papaver somniferum HOM05D003858 ORTHO05D005878 4.5e-112 409.1 488 55.1
AUR62003032 Chenopodium quinoa HOM05D003858 ORTHO05D005878 1.0e-111 407.9 288 72.2
MBI07_g31017_MAGBIO Magnolia biondii HOM05D003858 ORTHO05D005878 2.5e-110 403.3 405 58.8
AL7G45930 Arabidopsis lyrata HOM05D003858 ORTHO05D005878 9.5e-110 401.4 479 52.6
DCAR_029022 Daucus carota HOM05D003858 ORTHO05D005878 2.6e-107 393.3 450 54.0
SMO117G0291 Selaginella moellendorffii HOM05D003858 ORTHO05D005878 7.5e-107 391.7 342 58.5
RcHm_v2.0_Chr5g0020401 Rosa chinensis HOM05D003858 ORTHO05D005878 2.4e-105 386.7 481 48.4
FAN04G1110 Fragaria x ananassa HOM05D003858 ORTHO05D005878 6.0e-104 382.1 495 49.1
FAN18G4532 Fragaria x ananassa HOM05D003858 ORTHO05D005878 1.7e-103 380.6 495 49.1
Mapoly0084s0039 Marchantia polymorpha HOM05D003858 ORTHO05D005878 1.9e-102 377.1 365 56.2
Medtr7g012400 Medicago truncatula HOM05D003858 ORTHO05D005878 6.2e-101 372.1 324 59.6
TPR.G23280 Trifolium pratense HOM05D003858 ORTHO05D005878 4.0e-100 369.4 409 52.8
unitig_21.g20184 Utricularia gibba HOM05D003858 ORTHO05D005878 1.2e-99 367.9 500 47.6
ClCG01G014690 Citrullus lanatus HOM05D003858 ORTHO05D005878 3.4e-99 366.3 494 47.8
TAR629G0830 Trochodendron aralioides HOM05D003858 ORTHO05D005878 3.7e-98 362.8 307 63.5
Pp3c21_1450 Physcomitrium patens HOM05D003858 ORTHO05D005878 5.4e-97 359.0 286 62.2
FvH4_5g16770 Fragaria vesca HOM05D003858 ORTHO05D005878 1.9e-94 350.5 469 46.1
Ca_07893_v3 Cicer arietinum L. HOM05D003858 ORTHO05D005878 4.7e-93 345.9 312 59.9
FAN16G2509 Fragaria x ananassa HOM05D003858 ORTHO05D005878 4.7e-93 345.9 468 45.3
Medtr7g076710 Medicago truncatula HOM05D003858 ORTHO05D005878 4.7e-93 345.9 309 59.5
Cre13.g580900 Chlamydomonas reinhardtii HOM05D003858 ORTHO05D005878 3.7e-90 336.3 369 49.1
AagrBONN_evm.TU.Sc2ySwM_228.678 Anthoceros agrestis HOM05D003858 ORTHO05D005878 3.2e-89 333.2 434 45.2
TPR.G21069 Trifolium pratense HOM05D003858 ORTHO05D005878 3.0e-87 326.6 433 46.7
FAN20G1682 Fragaria x ananassa HOM05D003858 ORTHO05D005878 1.3e-82 311.2 485 42.9
PRCOL_00003781 Prasinoderma coloniale HOM05D003858 ORTHO05D005878 1.7e-82 310.8 441 42.9
MCO12G200 Micromonas commoda HOM05D003858 ORTHO05D005878 3.5e-80 303.1 258 57.8
Ca_28300_v3 Cicer arietinum L. HOM05D003858 ORTHO05D005878 1.6e-77 294.3 321 52.0
MD06G1142000 Malus domestica HOM05D003858 ORTHO05D005878 1.8e-76 290.8 411 46.0
Zm00001eb256780 Zea mays HOM05D003858 ORTHO05D005878 9.0e-76 288.5 243 62.6
Lj7A12G16 Lonicera japonica HOM05D003858 ORTHO05D005878 9.9e-75 285.0 451 39.5
Lj7A11G39 Lonicera japonica HOM05D003858 ORTHO05D005878 9.3e-73 278.5 513 37.8
PSO675G5360 Papaver somniferum HOM05D003858 ORTHO05D015239 1.2e-67 261.5 203 75.9
RcHm_v2.0_Chr5g0063241 Rosa chinensis HOM05D003858 ORTHO05D005878 2.6e-67 260.4 401 41.9
Haze_27048 Corylus avellana HOM05D003858 ORTHO05D005878 2.7e-64 250.4 336 39.6
Cfa023770 Carpinus fangiana HOM05D003858 ORTHO05D005878 8.7e-63 245.4 252 51.2
CBR_g61467 Chara braunii HOM05D003858 ORTHO05D005878 7.4e-62 242.3 216 53.7
SHI21468 Sapria himalayana HOM05D003858 ORTHO05D005878 2.8e-61 240.4 675 31.9
RcHm_v2.0_Chr5g0063291 Rosa chinensis HOM05D003858 ORTHO05D005878 3.2e-57 226.9 485 36.1
SHI21367 Sapria himalayana HOM05D003858 ORTHO05D005878 3.5e-48 196.8 389 35.7
CDE05G1919 Ceratophyllum demersum HOM05D003858 ORTHO05D015239 1.1e-41 175.3 253 45.1
Actinidia36804 Actinidia chinensis HOM05D003858 ORTHO05D005878 2.9e-34 150.6 277 40.1
Actinidia36803 Actinidia chinensis HOM05D003858 ORTHO05D015239 4.7e-32 143.3 99 69.7
Cc10_g13370 Coffea canephora HOM05D003858 ORTHO05D015239 7.9e-32 142.5 103 67.0
arahy.Tifrunner.gnm1.ann1.RIH0QL Arachis hypogaea HOM05D003858 ORTHO05D015239 1.5e-30 138.3 241 41.1
FAN13G2455 Fragaria x ananassa HOM05D003858 ORTHO05D015239 3.9e-23 113.6 100 56.0
Medtr6g024025 Medicago truncatula HOM05D003858 ORTHO05D267118 5.5e-17 93.2 108 50.9
Zm00001eb256800 Zea mays HOM05D003858 ORTHO05D033539 2.0e-14 84.7 118 46.6
FAN08G1067 Fragaria x ananassa HOM05D003858 ORTHO05D015239 3.7e-13 80.5 231 33.3
FvH4_3g12461 Fragaria vesca HOM05D000004 ORTHO05D000002 7.0e-12 76.3 142 37.3
CBR_g61468 Chara braunii HOM05D003858 ORTHO05D131775 9.1e-12 75.9 115 44.3
FvH4_5g25261 Fragaria vesca HOM05D003858 ORTHO05D015239 4.5e-11 73.6 77 49.4
AUR62028260 Chenopodium quinoa HOM05D008347 ORTHO05D006373 7.7e-11 72.8 93 51.6
TAR625G0709 Trochodendron aralioides HOM05D003858 ORTHO05D015239 1.7e-10 71.6 45 71.1
COL.COLO4_09285 Corchorus olitorius HOM05D003858 ORTHO05D155188 2.2e-10 71.2 46 73.9
FAN08G1033 Fragaria x ananassa HOM05D003858 ORTHO05D005878 2.9e-10 70.9 51 64.7
DCAR_007996 Daucus carota HOM05D003858 ORTHO05D176634 9.4e-09 65.9 50 70.0
C08p38970 Brassica napus HOM05D003858 ORTHO05D033539 4.7e-08 63.5 109 41.3


User provided reference genes

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