Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO724G1196 Papaver somniferum HOM05D007634 ORTHO05D004310 2.1e-90 336.3 261 100.0
PSO421G0073 Papaver somniferum HOM05D007634 ORTHO05D004310 3.0e-68 262.7 267 88.0
Aqoxy2G02664 Aquilegia oxysepala HOM05D007634 ORTHO05D004310 2.0e-19 100.5 85 62.4
TAR362G0031 Trochodendron aralioides HOM05D007634 ORTHO05D004310 2.4e-17 93.6 249 49.8
FvH4_4g20190 Fragaria vesca HOM05D007634 ORTHO05D004310 5.1e-15 85.9 86 53.5
FAN12G0129 Fragaria x ananassa HOM05D007634 ORTHO05D004310 5.1e-15 85.9 86 53.5
TWI09G0962 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 6.6e-15 85.5 91 57.1
FAN07G0504 Fragaria x ananassa HOM05D007634 ORTHO05D004310 1.9e-14 84.0 87 52.9
RcHm_v2.0_Chr4g0425851 Rosa chinensis HOM05D007634 ORTHO05D004310 2.5e-14 83.6 85 50.6
GSVIVG01034962001 Vitis vinifera HOM05D007634 ORTHO05D004310 4.3e-14 82.8 85 55.3
Duzib151G0484 Durio zibethinus HOM05D007634 ORTHO05D004310 5.6e-14 82.4 87 56.3
Prupe.1G113900 Prunus persica HOM05D007634 ORTHO05D004310 5.6e-14 82.4 89 53.9
MBI18_g35543_MAGBIO Magnolia biondii HOM05D007634 ORTHO05D004310 1.2e-13 81.3 72 62.5
MD13G1149900 Malus domestica HOM05D007634 ORTHO05D004310 1.2e-13 81.3 93 54.8
MBI19_g03266_MAGBIO Magnolia biondii HOM05D003564 ORTHO05D005332 2.1e-13 80.5 86 53.5
Thecc.04G304600 Theobroma cacao HOM05D007634 ORTHO05D004310 2.8e-13 80.1 93 54.8
Aqoxy5G02697 Aquilegia oxysepala HOM05D009154 ORTHO05D004310 6.2e-13 79.0 261 33.3
Potri.010G148200 Populus trichocarpa HOM05D007634 ORTHO05D004310 6.2e-13 79.0 79 54.4
TAR365G0785 Trochodendron aralioides HOM05D007634 ORTHO05D004310 1.4e-12 77.8 237 50.6
Potri.008G102700 Populus trichocarpa HOM05D007634 ORTHO05D004310 3.1e-12 76.6 88 47.7
CiPaw.02G072900 Carya illinoinensis HOM05D007634 ORTHO05D004310 4.0e-12 76.3 88 52.3
Sabra10G0114400 Salix brachista HOM05D007634 ORTHO05D004310 4.0e-12 76.3 78 53.8
Duzib212G0210 Durio zibethinus HOM05D007634 ORTHO05D004310 5.2e-12 75.9 85 56.5
MD16G1150300 Malus domestica HOM05D007634 ORTHO05D004310 5.2e-12 75.9 87 52.9
QL06p012814 Quercus lobata HOM05D007634 ORTHO05D004310 5.2e-12 75.9 69 59.4
Actinidia13348 Actinidia chinensis HOM05D007634 ORTHO05D004310 6.8e-12 75.5 73 56.2
Cfa015285 Carpinus fangiana HOM05D007634 ORTHO05D004310 3.4e-11 73.2 95 51.6
Haze_01332 Corylus avellana HOM05D007634 ORTHO05D004310 3.4e-11 73.2 95 51.6
Haze_01337 Corylus avellana HOM05D007634 ORTHO05D004310 3.4e-11 73.2 95 51.6
Sc13g0007130 Simmondsia chinensis HOM05D007634 ORTHO05D004310 4.4e-11 72.8 89 46.1
Lj6A693T64 Lonicera japonica HOM05D007634 ORTHO05D004310 7.6e-11 72.0 81 53.1
Hma1.2p1_0408F.1_g146500 Hydrangea macrophylla HOM05D009814 ORTHO05D004310 1.7e-10 70.9 74 54.1
Atru.chr4.3053 Acer truncatum HOM05D007634 ORTHO05D004310 2.2e-10 70.5 93 51.6
Ciclev10005745m.g Citrus clementina HOM05D007634 ORTHO05D004310 2.9e-10 70.1 91 49.5
COL.COLO4_34582 Corchorus olitorius HOM05D007634 ORTHO05D004310 2.9e-10 70.1 106 47.2
Dinv10123 Davidia involucrata HOM05D009814 ORTHO05D004310 4.9e-10 69.3 72 54.2
CSS0049163 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 8.4e-10 68.6 79 46.8
AUR62039253 Chenopodium quinoa HOM05D007634 ORTHO05D004310 8.4e-10 68.6 91 47.3
VMungo0540G1967 Vigna mungo HOM05D007634 ORTHO05D004310 1.1e-09 68.2 85 50.6
Gohir.D01G023562 Gossypium hirsutum HOM05D007634 ORTHO05D004310 3.2e-09 66.6 79 50.6
Gorai.002G031000 Gossypium raimondii HOM05D007634 ORTHO05D004310 3.2e-09 66.6 79 50.6
Hma1.2p1_1400F.1_g280910 Hydrangea macrophylla HOM05D007634 ORTHO05D004310 4.1e-09 66.2 88 52.3
Phvul.006G119700 Phaseolus vulgaris HOM05D007634 ORTHO05D004310 4.1e-09 66.2 79 50.6
Lalb_Chr18g0058621 Lupinus albus HOM05D007634 ORTHO05D004310 5.4e-09 65.9 79 50.6
Manes.05G013000 Manihot esculenta HOM05D009154 ORTHO05D004310 5.4e-09 65.9 80 51.2
Actinidia14250 Actinidia chinensis HOM05D003564 ORTHO05D004310 7.1e-09 65.5 71 50.7
Ah.07g201480 Amaranthus hybridus HOM05D007634 ORTHO05D004310 7.1e-09 65.5 93 44.1
Gohir.D09G241900 Gossypium hirsutum HOM05D007634 ORTHO05D004310 7.1e-09 65.5 81 51.9
GSVIVG01031256001 Vitis vinifera HOM05D007634 ORTHO05D004310 7.1e-09 65.5 78 47.4
Lj3A834G63 Lonicera japonica HOM05D007634 ORTHO05D004310 1.2e-08 64.7 76 50.0
Hund03138 Selenicereus undatus HOM05D007634 ORTHO05D004310 1.2e-08 64.7 90 43.3
Sabra08G0077600 Salix brachista HOM05D007634 ORTHO05D004310 1.6e-08 64.3 125 38.4
CANSAT78G1884 Cannabis sativa HOM05D007634 ORTHO05D004310 2.1e-08 63.9 89 44.9
Cpa.g.sc9.28 Carica papaya HOM05D007634 ORTHO05D004310 2.1e-08 63.9 84 46.4
CDE02G3511 Ceratophyllum demersum HOM05D063264 ORTHO05D004310 2.7e-08 63.5 82 48.8
AUR62016237 Chenopodium quinoa HOM05D007634 ORTHO05D004310 3.5e-08 63.2 86 46.5
Eucgr.H04066 Eucalyptus grandis HOM05D007634 ORTHO05D004310 4.6e-08 62.8 93 47.3
TWI73G1001 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 4.6e-08 62.8 85 44.7
DCAR_026994 Daucus carota HOM05D007634 ORTHO05D004310 6.0e-08 62.4 82 42.7
Manes.03G206900 Manihot esculenta HOM05D007634 ORTHO05D004310 6.0e-08 62.4 90 43.3
Atru.chr5.960 Acer truncatum HOM05D009814 ORTHO05D004310 1.0e-07 61.6 77 50.6
Ah.13g071450 Amaranthus hybridus HOM05D007634 ORTHO05D004310 1.0e-07 61.6 93 45.2
CSS0049682 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 1.0e-07 61.6 79 44.3
CiPaw.01G136100 Carya illinoinensis HOM05D007634 ORTHO05D004310 1.0e-07 61.6 92 43.5
Glyma.09G033800 Glycine max HOM05D007634 ORTHO05D004310 1.0e-07 61.6 81 49.4
Gohir.A01G035100 Gossypium hirsutum HOM05D007634 ORTHO05D004310 1.0e-07 61.6 87 47.1
Gohir.A09G241100 Gossypium hirsutum HOM05D007634 ORTHO05D004310 1.3e-07 61.2 78 51.3
Phvul.003G116800 Phaseolus vulgaris HOM05D007634 ORTHO05D004310 3.0e-07 60.1 88 43.2
Ciclev10021807m.g Citrus clementina HOM05D009814 ORTHO05D004310 3.9e-07 59.7 79 45.6
Gohir.A08G120000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 5.1e-07 59.3 80 48.8
Lj1C14T15 Lonicera japonica HOM05D009154 ORTHO05D004310 5.1e-07 59.3 73 42.5
VMungo1215G2062 Vigna mungo HOM05D007634 ORTHO05D004310 6.6e-07 58.9 74 44.6
ATR0693G086 Amborella trichopoda HOM05D007634 ORTHO05D004310 8.6e-07 58.5 72 52.8
Ca_00964_v3 Cicer arietinum L. HOM05D007634 ORTHO05D004310 8.6e-07 58.5 79 49.4
Lj6g0019253 Lotus japonicus HOM05D007634 ORTHO05D004310 1.1e-06 58.2 78 50.0
Os05g0131900 Oryza sativa ssp. japonica HOM05D024805 ORTHO05D025983 1.1e-06 58.2 79 41.8
Psat1g162160 Pisum sativum HOM05D007634 ORTHO05D004310 1.1e-06 58.2 78 48.7
Glyma.15G138500 Glycine max HOM05D007634 ORTHO05D004310 1.5e-06 57.8 66 54.5
CDE09G0065 Ceratophyllum demersum HOM05D063264 ORTHO05D004310 1.9e-06 57.4 80 42.5
Oeu038043.2 Olea europaea HOM05D016587 ORTHO05D019830 1.9e-06 57.4 68 48.5
QL12p018988 Quercus lobata HOM05D009154 ORTHO05D004310 2.5e-06 57.0 81 44.4
Lalb_Chr15g0089131 Lupinus albus HOM05D007634 ORTHO05D004310 3.3e-06 56.6 66 53.0
Medtr1g086670 Medicago truncatula HOM05D012173 ORTHO05D004310 3.3e-06 56.6 75 45.3
TPR.G31752 Trifolium pratense HOM05D012173 ORTHO05D004310 3.3e-06 56.6 72 45.8
Medtr2g033650 Medicago truncatula HOM05D007634 ORTHO05D004310 4.3e-06 56.2 79 50.6
Psat6g160360 Pisum sativum HOM05D012173 ORTHO05D004310 4.3e-06 56.2 75 44.0
GSVIVG01028151001 Vitis vinifera HOM05D009814 ORTHO05D004310 5.6e-06 55.8 71 49.3
Hma1.2p1_0078F.1_g039860 Hydrangea macrophylla HOM05D007634 ORTHO05D004310 7.3e-06 55.5 72 51.4
Rhsim06G0057500 Rhododendron simsii HOM05D009814 ORTHO05D004310 7.3e-06 55.5 61 52.5


User provided reference genes

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