Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO724G1078 Papaver somniferum HOM05D006913 ORTHO05D008720 3.4e-107 391.7 205 100.0
PSO170G2504 Papaver somniferum HOM05D006913 ORTHO05D008720 1.4e-100 369.8 205 94.1
RcHm_v2.0_Chr3g0486731 Rosa chinensis HOM05D006913 ORTHO05D008720 1.8e-68 263.1 187 71.7
Prupe.3G005300 Prunus persica HOM05D006913 ORTHO05D008720 5.3e-68 261.5 195 68.2
TAR362G1022 Trochodendron aralioides HOM05D006913 ORTHO05D008720 1.5e-67 260.0 181 74.6
Aqoxy5G02741 Aquilegia oxysepala HOM05D006913 ORTHO05D008720 3.4e-67 258.8 196 69.9
Thecc.01G320200 Theobroma cacao HOM05D006913 ORTHO05D008720 1.0e-66 257.3 184 73.4
Duzib138G1774 Durio zibethinus HOM05D006913 ORTHO05D008720 1.1e-65 253.8 199 69.3
Nn3g21840 Nelumbo nucifera HOM05D006913 ORTHO05D008720 1.1e-65 253.8 185 72.4
CSS0007691 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 5.5e-65 251.5 181 70.7
Potri.002G191300 Populus trichocarpa HOM05D006913 ORTHO05D008720 5.5e-65 251.5 194 69.1
Haze_05096 Corylus avellana HOM05D006913 ORTHO05D008720 1.2e-64 250.4 186 68.8
CSS0013168 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 2.1e-64 249.6 181 70.7
Atru.chr5.924 Acer truncatum HOM05D006913 ORTHO05D008720 2.7e-64 249.2 192 69.3
Cfa004859 Carpinus fangiana HOM05D006913 ORTHO05D008720 4.6e-64 248.4 186 68.3
PGSC0003DMG400007277 Solanum tuberosum HOM05D006913 ORTHO05D008720 6.0e-64 248.1 199 67.3
MD09G1287900 Malus domestica HOM05D006913 ORTHO05D008720 1.0e-63 247.3 185 69.2
GSVIVG01028181001 Vitis vinifera HOM05D006913 ORTHO05D008720 1.0e-63 247.3 173 72.8
FAN28G1862 Fragaria x ananassa HOM05D006913 ORTHO05D008720 1.8e-63 246.5 176 71.0
FvH4_1g26590 Fragaria vesca HOM05D006913 ORTHO05D008720 2.3e-63 246.1 176 71.0
MD17G1280100 Malus domestica HOM05D006913 ORTHO05D008720 3.0e-63 245.7 186 68.8
Manes.01G231800 Manihot esculenta HOM05D006913 ORTHO05D008720 3.0e-63 245.7 197 66.0
Migut.D00043 Erythranthe guttata HOM05D006913 ORTHO05D008720 3.9e-63 245.4 184 70.1
Sopen06g004130 Solanum pennellii HOM05D006913 ORTHO05D008720 5.1e-63 245.0 174 73.0
CAN.G1280.40 Capsicum annuum HOM05D006913 ORTHO05D008720 6.7e-63 244.6 181 70.2
TWI59G1195 Tripterygium wilfordii HOM05D006913 ORTHO05D008720 6.7e-63 244.6 182 69.2
Solyc06g009400.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 1.1e-62 243.8 174 72.4
Dinv12109 Davidia involucrata HOM05D006913 ORTHO05D008720 1.5e-62 243.4 194 68.0
Hma1.2p1_0408F.1_g146440 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 2.5e-62 242.7 178 70.2
CiPaw.07G121500 Carya illinoinensis HOM05D006913 ORTHO05D008720 5.7e-62 241.5 159 74.2
MBI18_g11536_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 1.3e-61 240.4 196 67.3
Cpa.g.c29544.2 Carica papaya HOM05D006913 ORTHO05D008720 1.6e-61 240.0 170 70.6
Ciclev10022378m.g Citrus clementina HOM05D006913 ORTHO05D008720 2.8e-61 239.2 148 80.4
MBI18_g09652_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 2.8e-61 239.2 171 73.1
Dinv33147 Davidia involucrata HOM05D006913 ORTHO05D008720 8.2e-61 237.7 188 67.0
SalBow3G0392 Salvia bowleyana HOM05D006913 ORTHO05D008720 3.1e-60 235.7 161 73.9
Glyma.19G219300 Glycine max HOM05D006913 ORTHO05D008720 4.1e-60 235.3 165 72.1
MELO3C023629.2 Cucumis melo HOM05D006913 ORTHO05D008720 5.3e-60 235.0 205 61.5
Nitab4.5_0003324g0110 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.5e-59 233.4 201 62.7
CsaV3_7G030270 Cucumis sativus L. HOM05D006913 ORTHO05D008720 2.6e-59 232.6 185 67.6
Lj1g0024926 Lotus japonicus HOM05D006913 ORTHO05D008720 4.5e-59 231.9 159 76.1
MSTRG.21716 Avicennia marina HOM05D006913 ORTHO05D008720 7.6e-59 231.1 184 67.4
Nitab4.5_0000363g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.0e-58 230.7 201 61.2
QL12p018506 Quercus lobata HOM05D006913 ORTHO05D008720 1.0e-58 230.7 153 76.5
VMungo1383G0882 Vigna mungo HOM05D006913 ORTHO05D008720 1.0e-58 230.7 165 71.5
Lalb_Chr04g0260061 Lupinus albus HOM05D006913 ORTHO05D008720 1.7e-58 229.9 195 62.6
THA.LOC104801315 Tarenaya hassleriana HOM05D006913 ORTHO05D008720 2.9e-58 229.2 162 71.6
PGR083G1650 Punica granatum HOM05D006913 ORTHO05D008720 3.8e-58 228.8 187 64.2
arahy.Tifrunner.gnm1.ann1.6PPK8V Arachis hypogaea HOM05D006913 ORTHO05D008720 6.5e-58 228.0 148 77.0
TPR.G4038 Trifolium pratense HOM05D006913 ORTHO05D008720 6.5e-58 228.0 149 75.8
HPP92_002654 Vanilla planifolia HOM05D006913 ORTHO05D008720 1.1e-57 227.3 158 73.4
Sed0008492 Sechium edule HOM05D006913 ORTHO05D008720 1.4e-57 226.9 196 62.8
Medtr7g109970 Medicago truncatula HOM05D006913 ORTHO05D008720 2.5e-57 226.1 185 64.3
Nitab4.5_0000222g0190 Nicotiana tabacum HOM05D006913 ORTHO05D008720 3.2e-57 225.7 158 74.7
ATR0693G068 Amborella trichopoda HOM05D006913 ORTHO05D008720 5.5e-57 224.9 141 78.7
Sed0005932 Sechium edule HOM05D006913 ORTHO05D008720 5.5e-57 224.9 194 64.9
Aa31LG5G1440 Aethionema arabicum HOM05D006913 ORTHO05D008720 9.3e-57 224.2 187 64.2
FAN19G0677 Fragaria x ananassa HOM05D006913 ORTHO05D008720 9.3e-57 224.2 208 59.6
Sc05g0000220 Simmondsia chinensis HOM05D006913 ORTHO05D008720 9.3e-57 224.2 157 70.1
FAN26G0114 Fragaria x ananassa HOM05D006913 ORTHO05D008720 1.2e-56 223.8 208 59.1
AT4G01900 Arabidopsis thaliana HOM05D006913 ORTHO05D008720 4.6e-56 221.9 138 78.3
CDE11G0810 Ceratophyllum demersum HOM05D006913 ORTHO05D008720 6.1e-56 221.5 166 68.1
Glyma.03G222100 Glycine max HOM05D006913 ORTHO05D008720 7.9e-56 221.1 176 67.0
Sabra02G0164300 Salix brachista HOM05D006913 ORTHO05D008720 1.3e-55 220.3 197 60.4
Peaxi162Scf00058g00218 Petunia axillaris HOM05D006913 ORTHO05D008720 1.8e-55 219.9 154 72.7
Carub.0006s3531 Capsella rubella HOM05D006913 ORTHO05D008720 2.3e-55 219.5 154 70.8
ClCG09G004810 Citrullus lanatus HOM05D006913 ORTHO05D008720 2.3e-55 219.5 221 57.9
Rhsim01G0292800 Rhododendron simsii HOM05D006913 ORTHO05D008720 5.1e-55 218.4 196 61.2
AL6G51370 Arabidopsis lyrata HOM05D006913 ORTHO05D008720 1.5e-54 216.9 138 75.4
unitig_578.g16634 Utricularia gibba HOM05D006913 ORTHO05D008720 4.3e-54 215.3 152 70.4
Psat3g018680 Pisum sativum HOM05D006913 ORTHO05D008720 5.7e-54 214.9 141 76.6
Sp6g01770 Schrenkiella parvula HOM05D006913 ORTHO05D008720 1.3e-53 213.8 154 70.8
Thhalv10028983m.g Eutrema salsugineum HOM05D006913 ORTHO05D008720 4.8e-53 211.8 154 70.8
BcaB01g02398 Brassica carinata HOM05D006913 ORTHO05D008720 6.3e-53 211.5 162 67.9
CiPaw.08G086000 Carya illinoinensis HOM05D006913 ORTHO05D008720 1.1e-52 210.7 149 73.2
BcaC01g06792 Brassica carinata HOM05D006913 ORTHO05D008720 5.3e-52 208.4 145 72.4
A03p31400 Brassica napus HOM05D006913 ORTHO05D008720 5.3e-52 208.4 194 59.8
C03p38310 Brassica napus HOM05D006913 ORTHO05D008720 5.3e-52 208.4 145 72.4
BolC3t16112H Brassica oleracea HOM05D006913 ORTHO05D008720 5.3e-52 208.4 145 72.4
BraA03t12321Z Brassica rapa HOM05D006913 ORTHO05D008720 5.3e-52 208.4 194 59.8
DCAR_002917 Daucus carota HOM05D006913 ORTHO05D008720 5.3e-52 208.4 196 58.7
Os05g0133100 Oryza sativa ssp. japonica HOM05D006913 ORTHO05D008720 3.4e-51 205.7 131 77.1
BcaB01g02393 Brassica carinata HOM05D006913 ORTHO05D008720 6.5e-50 201.4 132 76.5
arahy.Tifrunner.gnm1.ann1.IRZ7G5 Arachis hypogaea HOM05D006913 ORTHO05D008720 8.5e-50 201.1 187 58.3
Cc01_g21970 Coffea canephora HOM05D006913 ORTHO05D008720 2.1e-48 196.4 131 74.0
Mapoly0061s0127 Marchantia polymorpha HOM05D006913 ORTHO05D008720 2.1e-48 196.4 133 70.7
Pp3c4_15530 Physcomitrium patens HOM05D006913 ORTHO05D008720 1.8e-47 193.4 173 59.5
COL.COLO4_23180 Corchorus olitorius HOM05D006913 ORTHO05D008720 2.4e-44 183.0 103 89.3
Eucgr.H00899 Eucalyptus grandis HOM05D006913 ORTHO05D008720 1.0e-42 177.6 152 63.8
vmacro15097 Vaccinium macrocarpon HOM05D006913 ORTHO05D008720 4.2e-41 172.2 228 50.4
AagrBONN_evm.TU.Sc2ySwM_228.182 Anthoceros agrestis HOM05D006913 ORTHO05D008720 7.2e-41 171.4 122 69.7
AUR62024592 Chenopodium quinoa HOM05D006913 ORTHO05D008720 1.2e-40 170.6 186 52.2
Solyc01g015000.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 1.2e-40 170.6 107 81.3
Lj1C13T3 Lonicera japonica HOM05D006913 ORTHO05D008720 4.7e-40 168.7 104 83.7
SGA_v2.0_scaffold80G25710 Striga asiatica HOM05D006913 ORTHO05D008720 2.0e-38 163.3 119 70.6
Ca_09230_v3 Cicer arietinum L. HOM05D006913 ORTHO05D008720 2.6e-38 162.9 97 83.5
SEGI_19322 Sequoiadendron giganteum HOM05D006913 ORTHO05D008720 4.1e-36 155.6 99 76.8
SMO364G0946 Selaginella moellendorffii HOM05D006913 ORTHO05D008720 1.2e-35 154.1 102 74.5
FAN23G2363 Fragaria x ananassa HOM05D000049 ORTHO05D000027 3.8e-34 149.1 204 45.6
Phvul.001G215500 Phaseolus vulgaris HOM05D006913 ORTHO05D008720 1.6e-32 143.7 115 64.3
Hund09668 Selenicereus undatus HOM05D006913 ORTHO05D008720 6.1e-32 141.7 144 55.6
Oeu038057.1 Olea europaea HOM05D006913 ORTHO05D008720 8.0e-32 141.4 156 49.4
Cre07.g357350 Chlamydomonas reinhardtii HOM05D006913 ORTHO05D008720 3.0e-31 139.4 149 48.3
Duzib211G0548 Durio zibethinus HOM05D006913 ORTHO05D008720 1.2e-30 137.5 105 65.7
MCO04G045 Micromonas commoda HOM05D006913 ORTHO05D008720 2.0e-30 136.7 128 55.5
CARHR249910 Cardamine hirsuta HOM05D006913 ORTHO05D008720 5.3e-28 128.6 79 82.3
Eucgr.L01805 Eucalyptus grandis HOM05D006913 ORTHO05D008720 3.2e-25 119.4 99 59.6
Nitab4.5_0001013g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 2.1e-24 116.7 95 68.4
GSVIVG01010608001 Vitis vinifera HOM05D006913 ORTHO05D008720 4.7e-24 115.5 71 85.9
GSVIVG01037028001 Vitis vinifera HOM05D006913 ORTHO05D008720 4.7e-24 115.5 71 85.9
HPP92_027923 Vanilla planifolia HOM05D006913 ORTHO05D008720 3.4e-22 109.4 65 84.6
Hma1.2p1_3252F.1_g334540 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 2.2e-21 106.7 140 52.1
HPP92_027922 Vanilla planifolia HOM05D006913 ORTHO05D008720 9.1e-20 101.3 85 57.6
Haze_27360 Corylus avellana HOM05D006913 ORTHO05D008720 5.2e-15 85.5 109 35.8
C09p01450 Brassica napus HOM05D006913 ORTHO05D008720 5.0e-10 68.9 39 76.9
BolC9t53077H Brassica oleracea HOM05D006913 ORTHO05D008720 5.0e-10 68.9 39 76.9


User provided reference genes

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