Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO724G0984 Papaver somniferum HOM05D008087 ORTHO05D010187 7.7e-52 206.8 102 100.0
PSO135G0253 Papaver somniferum HOM05D008087 ORTHO05D010187 1.2e-49 199.5 106 94.3
Oeu049121.1 Olea europaea HOM05D008087 ORTHO05D010187 1.4e-32 142.9 106 67.9
Peaxi162Scf00127g00202 Petunia axillaris HOM05D008087 ORTHO05D010187 3.0e-32 141.7 106 68.9
Ciclev10009482m.g Citrus clementina HOM05D008087 ORTHO05D010187 6.8e-32 140.6 106 65.1
Potri.018G065700 Populus trichocarpa HOM05D008087 ORTHO05D010187 1.2e-31 139.8 108 68.5
TAR383G0588 Trochodendron aralioides HOM05D008087 ORTHO05D010187 1.2e-31 139.8 106 67.0
Eucgr.C03187 Eucalyptus grandis HOM05D008087 ORTHO05D010187 1.5e-31 139.4 106 66.0
Eucgr.L02787 Eucalyptus grandis HOM05D008087 ORTHO05D010187 1.5e-31 139.4 106 66.0
Manes.16G095600 Manihot esculenta HOM05D008087 ORTHO05D010187 2.6e-31 138.7 106 64.2
Nitab4.5_0000343g0200 Nicotiana tabacum HOM05D008087 ORTHO05D010187 2.6e-31 138.7 106 67.0
Nitab4.5_0002966g0020 Nicotiana tabacum HOM05D008087 ORTHO05D010187 2.6e-31 138.7 105 66.7
Hma1.2p1_0179F.1_g079550 Hydrangea macrophylla HOM05D008087 ORTHO05D010187 3.4e-31 138.3 106 68.9
Duzib168G2281 Durio zibethinus HOM05D008087 ORTHO05D010187 1.7e-30 136.0 106 67.0
QL11p000704 Quercus lobata HOM05D008087 ORTHO05D010187 1.7e-30 136.0 105 61.9
Cc06_g12130 Coffea canephora HOM05D008087 ORTHO05D010187 2.8e-30 135.2 106 64.2
Thecc.09G077500 Theobroma cacao HOM05D008087 ORTHO05D010187 3.7e-30 134.8 106 66.0
Cpa.g.sc28.44 Carica papaya HOM05D008087 ORTHO05D010187 4.8e-30 134.4 108 66.7
Cfa002992 Carpinus fangiana HOM05D008087 ORTHO05D010187 4.8e-30 134.4 105 64.8
DCAR_024749 Daucus carota HOM05D008087 ORTHO05D010187 6.3e-30 134.0 106 64.2
Sabra18G0058300 Salix brachista HOM05D008087 ORTHO05D010187 1.4e-29 132.9 108 64.8
Nn8g38653 Nelumbo nucifera HOM05D008087 ORTHO05D010187 1.8e-29 132.5 106 63.2
CSS0002060 Camellia sinensis var. sinensis HOM05D008087 ORTHO05D010187 2.4e-29 132.1 106 62.3
CiPaw.03G206800 Carya illinoinensis HOM05D008087 ORTHO05D010187 3.1e-29 131.7 106 64.2
CSS0037579 Camellia sinensis var. sinensis HOM05D008087 ORTHO05D010187 5.4e-29 131.0 106 62.3
TWI34G0776 Tripterygium wilfordii HOM05D008087 ORTHO05D010187 7.0e-29 130.6 105 60.0
Lj4g0020355 Lotus japonicus HOM05D008087 ORTHO05D010187 9.1e-29 130.2 104 61.5
Atru.chr7.1701 Acer truncatum HOM05D002335 ORTHO05D006692 1.2e-28 129.8 106 62.3
MSTRG.19463 Avicennia marina HOM05D008087 ORTHO05D010187 1.2e-28 129.8 100 67.0
COL.COLO4_18101 Corchorus olitorius HOM05D008087 ORTHO05D010187 1.6e-28 129.4 106 63.2
Glyma.13G110250 Glycine max HOM05D008087 ORTHO05D010187 1.6e-28 129.4 104 63.5
CANSAT56G3514 Cannabis sativa HOM05D008087 ORTHO05D010187 5.9e-28 127.5 106 60.4
Lalb_Chr07g0181171 Lupinus albus HOM05D008087 ORTHO05D010187 1.3e-27 126.3 104 62.5
MD15G1217200 Malus domestica HOM05D008087 ORTHO05D010187 1.7e-27 125.9 107 59.8
Medtr4g125370 Medicago truncatula HOM05D008087 ORTHO05D010187 1.7e-27 125.9 104 61.5
Rhsim05G0007800 Rhododendron simsii HOM05D008087 ORTHO05D010187 1.7e-27 125.9 106 62.3
Aqoxy1G01322 Aquilegia oxysepala HOM05D008087 ORTHO05D010187 2.3e-27 125.6 105 59.0
Gorai.010G088200 Gossypium raimondii HOM05D008087 ORTHO05D010187 2.3e-27 125.6 106 61.3
PGSC0003DMG400013001 Solanum tuberosum HOM05D008087 ORTHO05D010187 2.3e-27 125.6 106 58.5
Gohir.D06G075300 Gossypium hirsutum HOM05D008087 ORTHO05D010187 2.9e-27 125.2 106 61.3
Lj4P912T21 Lonicera japonica HOM05D008087 ORTHO05D010187 2.9e-27 125.2 106 60.4
Prupe.7G199300 Prunus persica HOM05D008087 ORTHO05D010187 2.9e-27 125.2 107 61.7
SalBow6G2426 Salvia bowleyana HOM05D008087 ORTHO05D010187 2.9e-27 125.2 102 63.7
VMungo1215G2436 Vigna mungo HOM05D008087 ORTHO05D010187 2.9e-27 125.2 104 60.6
RcHm_v2.0_Chr2g0094891 Rosa chinensis HOM05D008087 ORTHO05D010187 3.8e-27 124.8 106 62.3
CSS0034066 Camellia sinensis var. sinensis HOM05D008087 ORTHO05D010187 6.5e-27 124.0 105 60.0
Gohir.A06G076300 Gossypium hirsutum HOM05D008087 ORTHO05D010187 6.5e-27 124.0 106 60.4
Glyma.17G049450 Glycine max HOM05D008087 ORTHO05D010187 1.1e-26 123.2 104 60.6
MBI19_g11825_MAGBIO Magnolia biondii HOM05D008087 ORTHO05D010187 1.5e-26 122.9 106 56.6
Phvul.003G131000 Phaseolus vulgaris HOM05D008087 ORTHO05D010187 2.5e-26 122.1 104 60.6
GSVIVG01015086001 Vitis vinifera HOM05D004023 ORTHO05D004681 4.2e-26 121.3 97 63.9
Sopen07g021260 Solanum pennellii HOM05D008087 ORTHO05D010187 1.6e-25 119.4 106 57.5
Solyc07g041770.1 Solanum lycopersicum HOM05D008087 ORTHO05D010187 2.1e-25 119.0 106 56.6
Duzib187G0811 Durio zibethinus HOM05D008087 ORTHO05D010187 3.6e-25 118.2 95 65.3
Psat4g017680 Pisum sativum HOM05D008087 ORTHO05D010187 3.6e-25 118.2 106 59.4
Migut.J00928 Erythranthe guttata HOM05D008087 ORTHO05D010187 6.1e-25 117.5 96 65.6
arahy.Tifrunner.gnm1.ann1.TB6UZQ Arachis hypogaea HOM05D008087 ORTHO05D010187 1.0e-24 116.7 104 56.7
AUR62028937 Chenopodium quinoa HOM05D008087 ORTHO05D010187 1.8e-24 115.9 108 57.4
Ca_21320_v3 Cicer arietinum L. HOM05D008087 ORTHO05D010187 1.8e-24 115.9 104 56.7
TPR.G12579 Trifolium pratense HOM05D008087 ORTHO05D010187 4.4e-23 111.3 104 56.7
Ah.14g084950 Amaranthus hybridus HOM05D008087 ORTHO05D010187 2.9e-19 98.6 109 49.5
Dinv42391 Davidia involucrata HOM05D002335 ORTHO05D006692 1.8e-16 89.4 66 68.2
AT3G42725 Arabidopsis thaliana HOM05D008087 ORTHO05D010187 4.4e-15 84.7 102 45.1
PGR044G2582 Punica granatum HOM05D008087 ORTHO05D010187 5.8e-15 84.3 105 44.8
AL5G20930 Arabidopsis lyrata HOM05D008087 ORTHO05D010187 3.7e-14 81.6 102 43.1
Sc08g0008880 Simmondsia chinensis HOM05D008087 ORTHO05D010187 4.9e-14 81.3 106 45.3
Ah.09g231600 Amaranthus hybridus HOM05D008087 ORTHO05D010187 6.4e-14 80.9 81 50.6
ATR0598G047 Amborella trichopoda HOM05D008087 ORTHO05D010187 8.3e-14 80.5 106 39.6
MD15G1091800 Malus domestica HOM05D008087 ORTHO05D010187 1.2e-12 76.6 77 50.6
Lsat_1_v5_gn_7_35101 Lactuca sativa HOM05D004023 ORTHO05D004681 2.0e-12 75.9 100 45.0
THA.LOC104811009 Tarenaya hassleriana HOM05D008087 ORTHO05D010187 1.6e-09 66.2 107 39.3
PGR044G2297 Punica granatum HOM05D008087 ORTHO05D010187 1.8e-08 62.8 88 39.8
SMO358G0701 Selaginella moellendorffii HOM05D016812 ORTHO05D010187 4.4e-07 58.2 96 35.4


User provided reference genes

Program Settings