Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO724G0964 Papaver somniferum HOM05D003858 ORTHO05D005878 0.0e+00 1697.2 879 100.0
PSO724G1140 Papaver somniferum HOM05D003858 ORTHO05D005878 0.0e+00 1269.6 805 81.4
PSO170G6136 Papaver somniferum HOM05D003858 ORTHO05D005878 2.7e-161 573.5 486 66.7
PSO478G4955 Papaver somniferum HOM05D003858 ORTHO05D005878 2.5e-135 487.3 416 65.1
PSO017G3328 Papaver somniferum HOM05D003858 ORTHO05D005878 1.3e-134 485.0 416 64.9
Glyma.18G230300 Glycine max HOM05D003858 ORTHO05D005878 6.9e-125 452.6 433 58.2
Cc10_g13400 Coffea canephora HOM05D003858 ORTHO05D005878 9.0e-125 452.2 499 54.5
vmacro16677 Vaccinium macrocarpon HOM05D003858 ORTHO05D005878 3.4e-124 450.3 470 55.3
AUR62028258 Chenopodium quinoa HOM05D003858 ORTHO05D005878 1.0e-123 448.7 406 60.3
Gorai.003G120600 Gossypium raimondii HOM05D003858 ORTHO05D005878 1.7e-123 448.0 420 59.8
Rhsim10G0051500 Rhododendron simsii HOM05D003858 ORTHO05D005878 1.7e-123 448.0 495 54.3
Gohir.D03G114300 Gossypium hirsutum HOM05D003858 ORTHO05D005878 3.8e-123 446.8 514 52.7
Manes.06G119400 Manihot esculenta HOM05D003858 ORTHO05D005878 3.8e-123 446.8 421 60.3
Aqoxy3G00800 Aquilegia oxysepala HOM05D003858 ORTHO05D005878 8.5e-123 445.7 430 58.6
CiPaw.12G042900 Carya illinoinensis HOM05D003858 ORTHO05D005878 1.4e-122 444.9 502 53.8
CDE05G2345 Ceratophyllum demersum HOM05D003858 ORTHO05D005878 1.4e-122 444.9 491 54.0
CANSAT80G0729 Cannabis sativa HOM05D003858 ORTHO05D005878 2.5e-122 444.1 417 59.2
Glyma.09G261800 Glycine max HOM05D003858 ORTHO05D005878 2.5e-122 444.1 416 59.9
Actinidia08869 Actinidia chinensis HOM05D003858 ORTHO05D005878 3.2e-122 443.7 422 59.5
COL.COLO4_28121 Corchorus olitorius HOM05D003858 ORTHO05D005878 4.2e-122 443.4 459 55.8
Gohir.A03G052800 Gossypium hirsutum HOM05D003858 ORTHO05D005878 4.2e-122 443.4 514 52.7
Cpa.g.sc250.13 Carica papaya HOM05D003858 ORTHO05D005878 1.6e-121 441.4 420 59.3
Dinv23145 Davidia involucrata HOM05D003858 ORTHO05D005878 1.6e-121 441.4 413 60.0
Phvul.008G067600 Phaseolus vulgaris HOM05D003858 ORTHO05D005878 1.6e-121 441.4 416 58.9
Sc10g0010460 Simmondsia chinensis HOM05D003858 ORTHO05D005878 1.6e-121 441.4 452 57.3
Nn4g22329 Nelumbo nucifera HOM05D003858 ORTHO05D005878 2.1e-121 441.0 415 58.3
CSS0032323 Camellia sinensis var. sinensis HOM05D003858 ORTHO05D005878 3.6e-121 440.3 464 55.2
SGA_v2.0_scaffold2G01192 Striga asiatica HOM05D003858 ORTHO05D005878 4.6e-121 439.9 499 52.7
CiPaw.15G056500 Carya illinoinensis HOM05D003858 ORTHO05D005878 7.9e-121 439.1 493 54.2
Rhsim12G0174400 Rhododendron simsii HOM05D003858 ORTHO05D005878 7.9e-121 439.1 486 53.7
Thecc.03G129000 Theobroma cacao HOM05D003858 ORTHO05D005878 7.9e-121 439.1 512 53.1
Potri.015G096100 Populus trichocarpa HOM05D003858 ORTHO05D005878 1.0e-120 438.7 417 58.3
SalBow6G4120 Salvia bowleyana HOM05D003858 ORTHO05D005878 1.0e-120 438.7 421 57.7
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 1.4e-120 438.3 456 56.8
arahy.Tifrunner.gnm1.ann1.L81EPG Arachis hypogaea HOM05D003858 ORTHO05D005878 3.9e-120 436.8 464 55.2
CsaV3_1G007630 Cucumis sativus L. HOM05D003858 ORTHO05D005878 3.9e-120 436.8 420 58.3
TAR371G0204 Trochodendron aralioides HOM05D003858 ORTHO05D005878 3.9e-120 436.8 506 51.2
arahy.Tifrunner.gnm1.ann1.LEEI49 Arachis hypogaea HOM05D003858 ORTHO05D005878 5.1e-120 436.4 469 54.6
Duzib205G0757 Durio zibethinus HOM05D003858 ORTHO05D005878 5.1e-120 436.4 527 52.8
Sabra15G0116900 Salix brachista HOM05D003858 ORTHO05D005878 5.1e-120 436.4 476 53.8
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 8.8e-120 435.6 500 53.4
Nitab4.5_0005642g0040 Nicotiana tabacum HOM05D003858 ORTHO05D005878 1.1e-119 435.3 410 58.8
Nitab4.5_0006042g0010 Nicotiana tabacum HOM05D003858 ORTHO05D005878 1.1e-119 435.3 410 59.0
Hund02439 Selenicereus undatus HOM05D003858 ORTHO05D005878 2.0e-119 434.5 411 59.1
Solyc08g080850.4 Solanum lycopersicum HOM05D003858 ORTHO05D005878 2.0e-119 434.5 406 59.1
Migut.N03254 Erythranthe guttata HOM05D003858 ORTHO05D005878 2.5e-119 434.1 388 59.8
MELO3C002182.2 Cucumis melo HOM05D003858 ORTHO05D005878 3.3e-119 433.7 463 54.2
Peaxi162Scf00119g00520 Petunia axillaris HOM05D003858 ORTHO05D005878 5.7e-119 433.0 466 53.6
SGA_v2.0_scaffold28G11963 Striga asiatica HOM05D003858 ORTHO05D005878 7.4e-119 432.6 486 52.7
CAN.G774.2 Capsicum annuum HOM05D003858 ORTHO05D005878 9.7e-119 432.2 437 56.5
HanXRQChr02g0034711 Helianthus annuus HOM05D003858 ORTHO05D005878 9.7e-119 432.2 509 53.2
Sopen08g029150 Solanum pennellii HOM05D003858 ORTHO05D005878 9.7e-119 432.2 398 59.3
PGSC0003DMG400012349 Solanum tuberosum HOM05D003858 ORTHO05D005878 9.7e-119 432.2 398 59.0
Lalb_Chr01g0021111 Lupinus albus HOM05D003858 ORTHO05D005878 1.7e-118 431.4 491 53.0
TWI23G0194 Tripterygium wilfordii HOM05D003858 ORTHO05D005878 1.7e-118 431.4 510 51.4
ECA247G4076 Erigeron canadensis HOM05D003858 ORTHO05D005878 3.7e-118 430.3 419 58.0
Sed0027713 Sechium edule HOM05D003858 ORTHO05D005878 3.7e-118 430.3 506 52.2
DCAR_001872 Daucus carota HOM05D003858 ORTHO05D005878 4.8e-118 429.9 497 52.3
PSO423G0213 Papaver somniferum HOM05D003858 ORTHO05D005878 1.4e-117 428.3 464 58.0
EL10Ac9g21903 Beta vulgaris HOM05D003858 ORTHO05D005878 1.8e-117 427.9 450 54.2
PGR004G1062 Punica granatum HOM05D003858 ORTHO05D005878 1.8e-117 427.9 432 56.0
TPR.G2433 Trifolium pratense HOM05D003858 ORTHO05D005878 2.4e-117 427.6 459 53.8
Atru.chr9.1128 Acer truncatum HOM05D003858 ORTHO05D005878 4.1e-117 426.8 477 53.5
Eucgr.E01497 Eucalyptus grandis HOM05D003858 ORTHO05D005878 4.1e-117 426.8 404 58.9
Ah.01g020640 Amaranthus hybridus HOM05D003858 ORTHO05D005878 1.2e-116 425.2 542 48.7
Hma1.2p1_0014F.1_g009460 Hydrangea macrophylla HOM05D003858 ORTHO05D005878 1.2e-116 425.2 423 55.8
Lj1g0027711 Lotus japonicus HOM05D003858 ORTHO05D005878 1.2e-116 425.2 484 52.7
QL10p002959 Quercus lobata HOM05D003858 ORTHO05D005878 3.4e-116 423.7 497 51.3
Oeu001550.1 Olea europaea HOM05D003858 ORTHO05D005878 5.9e-116 422.9 425 56.2
MBI07_g31017_MAGBIO Magnolia biondii HOM05D003858 ORTHO05D005878 1.0e-115 422.2 390 58.7
VMungo1383G3568 Vigna mungo HOM05D003858 ORTHO05D005878 1.7e-115 421.4 407 58.0
Haze_09759 Corylus avellana HOM05D003858 ORTHO05D005878 2.2e-115 421.0 507 49.7
Haze_07135 Corylus avellana HOM05D003858 ORTHO05D005878 3.8e-115 420.2 494 49.8
Medtr7g090710 Medicago truncatula HOM05D003858 ORTHO05D005878 6.5e-115 419.5 460 52.6
Cfa015653 Carpinus fangiana HOM05D003858 ORTHO05D005878 8.5e-115 419.1 492 51.4
Lj5C96T4 Lonicera japonica HOM05D003858 ORTHO05D005878 1.1e-114 418.7 487 53.0
PSO724G1315 Papaver somniferum HOM05D003858 ORTHO05D005878 1.1e-114 418.7 494 55.7
AUR62003032 Chenopodium quinoa HOM05D003858 ORTHO05D005878 1.2e-113 415.2 330 64.8
Lsat_1_v5_gn_1_28960 Lactuca sativa HOM05D003858 ORTHO05D005878 3.6e-113 413.7 434 56.2
Zm00001eb103140 Zea mays HOM05D003858 ORTHO05D005878 3.6e-113 413.7 494 50.4
Zm00001eb256840 Zea mays HOM05D003858 ORTHO05D005878 1.4e-112 411.8 494 50.2
Sp4g03970 Schrenkiella parvula HOM05D003858 ORTHO05D005878 2.3e-112 411.0 412 56.1
PSO170G3101 Papaver somniferum HOM05D003858 ORTHO05D005878 3.0e-112 410.6 470 55.5
BcaC02g08384 Brassica carinata HOM05D003858 ORTHO05D005878 3.9e-112 410.2 408 56.4
A04p19370 Brassica napus HOM05D003858 ORTHO05D005878 3.9e-112 410.2 412 56.3
C04p54940 Brassica napus HOM05D003858 ORTHO05D005878 3.9e-112 410.2 408 56.4
Aa31sc86G50 Aethionema arabicum HOM05D003858 ORTHO05D005878 5.1e-112 409.8 433 53.8
BcaB06g28028 Brassica carinata HOM05D003858 ORTHO05D005878 5.1e-112 409.8 421 55.3
MD14G1157300 Malus domestica HOM05D003858 ORTHO05D005878 5.1e-112 409.8 415 55.7
FAN08G1590 Fragaria x ananassa HOM05D003858 ORTHO05D005878 6.7e-112 409.5 496 50.2
BraA04t17533Z Brassica rapa HOM05D003858 ORTHO05D005878 8.8e-112 409.1 408 56.4
RcHm_v2.0_Chr7g0190211 Rosa chinensis HOM05D003858 ORTHO05D005878 8.8e-112 409.1 463 51.4
FvH4_5g08310 Fragaria vesca HOM05D003858 ORTHO05D005878 2.6e-111 407.5 496 50.0
Psat3g110800 Pisum sativum HOM05D003858 ORTHO05D005878 2.6e-111 407.5 427 53.6
AL4G16080 Arabidopsis lyrata HOM05D003858 ORTHO05D005878 4.4e-111 406.8 429 54.1
THA.LOC104800505 Tarenaya hassleriana HOM05D003858 ORTHO05D005878 5.7e-111 406.4 429 53.8
AT2G24990 Arabidopsis thaliana HOM05D003858 ORTHO05D005878 1.7e-110 404.8 412 55.3
AT5G37350 Arabidopsis thaliana HOM05D003858 ORTHO05D005878 2.2e-110 404.4 446 52.5
ATR0559G302 Amborella trichopoda HOM05D003858 ORTHO05D005878 2.8e-110 404.1 526 47.7
Thhalv10000120m.g Eutrema salsugineum HOM05D003858 ORTHO05D005878 3.7e-110 403.7 430 54.0
DCAR_021618 Daucus carota HOM05D003858 ORTHO05D005878 6.3e-110 402.9 548 46.7
HPP92_020969 Vanilla planifolia HOM05D003858 ORTHO05D005878 8.2e-110 402.5 386 55.7
Prupe.5G151200 Prunus persica HOM05D003858 ORTHO05D005878 1.1e-109 402.1 415 54.7
BolC4t27030H Brassica oleracea HOM05D003858 ORTHO05D005878 2.4e-109 401.0 412 55.6
Carub.0004s0455 Capsella rubella HOM05D003858 ORTHO05D005878 3.1e-109 400.6 414 54.6
SEGI_19941 Sequoiadendron giganteum HOM05D003858 ORTHO05D005878 1.6e-108 398.3 390 55.1
VMungo1383G2243 Vigna mungo HOM05D003858 ORTHO05D005878 3.5e-108 397.1 478 51.9
CARHR116740 Cardamine hirsuta HOM05D003858 ORTHO05D005878 1.3e-107 395.2 430 53.0
TPR.G23280 Trifolium pratense HOM05D003858 ORTHO05D005878 1.3e-107 395.2 358 59.2
TAR629G0830 Trochodendron aralioides HOM05D003858 ORTHO05D005878 1.1e-106 392.1 406 54.2
Os07g0162300 Oryza sativa ssp. japonica HOM05D003858 ORTHO05D005878 2.5e-106 391.0 457 49.7
Aa31LG8G17300 Aethionema arabicum HOM05D003858 ORTHO05D005878 8.8e-104 382.5 429 51.3
AUR62007839 Chenopodium quinoa HOM05D003858 ORTHO05D005878 6.3e-102 376.3 395 55.2
SalBow7G4372 Salvia bowleyana HOM05D003858 ORTHO05D005878 2.9e-99 367.5 490 48.8
AL7G45930 Arabidopsis lyrata HOM05D003858 ORTHO05D005878 3.2e-98 364.0 433 50.3
SMO117G0291 Selaginella moellendorffii HOM05D003858 ORTHO05D005878 1.0e-96 359.0 369 53.1
Medtr7g012400 Medicago truncatula HOM05D003858 ORTHO05D005878 5.2e-96 356.7 410 50.5
RcHm_v2.0_Chr5g0020401 Rosa chinensis HOM05D003858 ORTHO05D005878 2.0e-95 354.8 467 46.0
Ca_07893_v3 Cicer arietinum L. HOM05D003858 ORTHO05D005878 1.7e-94 351.7 400 52.2
Pp3c21_1450 Physcomitrium patens HOM05D003858 ORTHO05D005878 6.3e-94 349.7 286 59.8
Medtr7g076710 Medicago truncatula HOM05D003858 ORTHO05D005878 5.4e-93 346.7 396 51.8
FAN18G4532 Fragaria x ananassa HOM05D003858 ORTHO05D005878 7.0e-93 346.3 495 45.9
FAN04G1110 Fragaria x ananassa HOM05D003858 ORTHO05D005878 9.1e-93 345.9 494 45.7
Mapoly0084s0039 Marchantia polymorpha HOM05D003858 ORTHO05D005878 1.2e-92 345.5 492 42.7
unitig_21.g20184 Utricularia gibba HOM05D003858 ORTHO05D005878 1.3e-91 342.0 510 44.1
ClCG01G014690 Citrullus lanatus HOM05D003858 ORTHO05D005878 5.5e-90 336.7 420 50.2
PSO063G1302 Papaver somniferum HOM05D003858 ORTHO05D005878 5.5e-90 336.7 272 68.8
DCAR_029022 Daucus carota HOM05D003858 ORTHO05D005878 5.7e-87 326.6 353 54.7
FvH4_5g16770 Fragaria vesca HOM05D003858 ORTHO05D005878 5.7e-87 326.6 463 43.8
FAN16G2509 Fragaria x ananassa HOM05D003858 ORTHO05D005878 4.1e-85 320.5 463 43.8
TPR.G21069 Trifolium pratense HOM05D003858 ORTHO05D005878 7.7e-84 316.2 348 51.1
Cre13.g580900 Chlamydomonas reinhardtii HOM05D003858 ORTHO05D005878 2.9e-83 314.3 285 53.7
AagrBONN_evm.TU.Sc2ySwM_228.678 Anthoceros agrestis HOM05D003858 ORTHO05D005878 8.0e-81 306.2 369 45.0
Ca_28300_v3 Cicer arietinum L. HOM05D003858 ORTHO05D005878 7.5e-79 299.7 324 51.5
PRCOL_00003781 Prasinoderma coloniale HOM05D003858 ORTHO05D005878 3.7e-78 297.4 277 52.0
FAN20G1682 Fragaria x ananassa HOM05D003858 ORTHO05D005878 4.1e-77 293.9 485 40.4
Lj7A12G16 Lonicera japonica HOM05D003858 ORTHO05D005878 9.2e-77 292.7 418 40.7
MCO12G200 Micromonas commoda HOM05D003858 ORTHO05D005878 1.9e-74 285.0 282 51.1
PSO421G0376 Papaver somniferum HOM05D003858 ORTHO05D015239 1.5e-66 258.8 350 50.9
Lj7A11G39 Lonicera japonica HOM05D003858 ORTHO05D005878 1.9e-66 258.5 486 38.1
MD06G1142000 Malus domestica HOM05D003858 ORTHO05D005878 2.3e-64 251.5 403 42.4
CBR_g61467 Chara braunii HOM05D003858 ORTHO05D005878 4.9e-62 243.8 261 48.7
RcHm_v2.0_Chr5g0063241 Rosa chinensis HOM05D003858 ORTHO05D005878 2.4e-61 241.5 448 39.3
SHI21468 Sapria himalayana HOM05D003858 ORTHO05D005878 1.7e-59 235.3 343 42.9
Zm00001eb256780 Zea mays HOM05D003858 ORTHO05D005878 2.3e-59 235.0 253 54.9
Haze_27048 Corylus avellana HOM05D003858 ORTHO05D005878 9.5e-58 229.6 317 38.5
Cfa023770 Carpinus fangiana HOM05D003858 ORTHO05D005878 8.1e-57 226.5 312 42.6
RcHm_v2.0_Chr5g0063291 Rosa chinensis HOM05D003858 ORTHO05D005878 4.4e-55 220.7 383 37.6
SHI21367 Sapria himalayana HOM05D003858 ORTHO05D005878 1.1e-48 199.5 516 32.2
CDE05G1919 Ceratophyllum demersum HOM05D003858 ORTHO05D015239 1.8e-48 198.7 194 54.6
arahy.Tifrunner.gnm1.ann1.RIH0QL Arachis hypogaea HOM05D003858 ORTHO05D015239 3.9e-35 154.5 200 48.0
Actinidia36803 Actinidia chinensis HOM05D003858 ORTHO05D015239 1.2e-31 142.9 180 47.8
Cc10_g13370 Coffea canephora HOM05D003858 ORTHO05D015239 6.4e-30 137.1 103 62.1
PSO675G5360 Papaver somniferum HOM05D003858 ORTHO05D015239 1.1e-29 136.3 202 45.5
Actinidia36804 Actinidia chinensis HOM05D003858 ORTHO05D005878 5.3e-24 117.5 296 36.5
FAN13G2455 Fragaria x ananassa HOM05D003858 ORTHO05D015239 5.5e-21 107.5 105 51.4
Medtr6g024025 Medicago truncatula HOM05D003858 ORTHO05D267118 4.6e-20 104.4 105 52.4
FAN08G1067 Fragaria x ananassa HOM05D003858 ORTHO05D015239 2.1e-12 79.0 220 33.6
COL.COLO4_09285 Corchorus olitorius HOM05D003858 ORTHO05D155188 1.8e-11 75.9 44 77.3
FAN08G1033 Fragaria x ananassa HOM05D003858 ORTHO05D005878 5.1e-11 74.3 63 55.6
TAR625G0709 Trochodendron aralioides HOM05D003858 ORTHO05D015239 1.9e-10 72.4 45 71.1
DCAR_007996 Daucus carota HOM05D003858 ORTHO05D176634 2.5e-10 72.0 51 68.6
AUR62028260 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.1e-08 66.6 91 47.3
FvH4_5g25261 Fragaria vesca HOM05D003858 ORTHO05D015239 6.9e-08 63.9 83 42.2
FAN21G1362 Fragaria x ananassa HOM05D003858 ORTHO05D207154 2.0e-07 62.4 189 29.6
HanXRQChr13g0426321 Helianthus annuus HOM05D003858 ORTHO05D000008 3.8e-06 58.2 63 36.5
Zm00001eb256810 Zea mays HOM05D003858 ORTHO05D005878 3.8e-06 58.2 54 50.0
CBR_g61468 Chara braunii HOM05D003858 ORTHO05D131775 5.0e-06 57.8 98 39.8


User provided reference genes

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