Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO724G0885 Papaver somniferum HOM05D021439 ORTHO05D000412 4.9e-79 297.7 152 100.0
PSO135G0471 Papaver somniferum HOM05D021439 ORTHO05D000412 3.1e-73 278.5 152 94.7
PSO591G0316 Papaver somniferum HOM05D021439 ORTHO05D000412 7.3e-14 81.3 147 36.1
PSO591G0403 Papaver somniferum HOM05D021439 ORTHO05D000412 7.3e-14 81.3 147 36.1
PSO675G0970 Papaver somniferum HOM05D000581 ORTHO05D000412 2.3e-12 76.3 156 32.1
Prupe.6G123200 Prunus persica HOM05D000581 ORTHO05D000412 3.2e-09 65.9 137 27.7
Duzib128G0312 Durio zibethinus HOM05D000581 ORTHO05D000412 1.6e-08 63.5 148 29.7
PSO675G3526 Papaver somniferum HOM05D021439 ORTHO05D302518 1.6e-08 63.5 81 42.0
Thecc.05G085200 Theobroma cacao HOM05D000581 ORTHO05D000412 2.0e-08 63.2 147 25.9
Duzib093G1459 Durio zibethinus HOM05D000581 ORTHO05D000412 2.7e-08 62.8 147 27.2
MSTRG.3966 Avicennia marina HOM05D000581 ORTHO05D000412 3.5e-08 62.4 146 30.8
Cc01_g19940 Coffea canephora HOM05D000581 ORTHO05D000412 3.5e-08 62.4 145 29.0
Aqoxy5G00588 Aquilegia oxysepala HOM05D000581 ORTHO05D000412 7.8e-08 61.2 128 27.3
PSO017G6486 Papaver somniferum HOM05D021439 ORTHO05D303580 7.8e-08 61.2 81 42.0
SGA_v2.0_scaffold172G39043 Striga asiatica HOM05D000581 ORTHO05D000412 7.8e-08 61.2 117 29.9
Peaxi162Scf00095g00213 Petunia axillaris HOM05D000581 ORTHO05D000412 1.0e-07 60.8 117 30.8
HanXRQChr09g0276221 Helianthus annuus HOM05D000581 ORTHO05D000412 1.3e-07 60.5 108 26.9
Sed0015069 Sechium edule HOM05D000581 ORTHO05D000412 1.3e-07 60.5 136 27.2
TAR362G1287 Trochodendron aralioides HOM05D000581 ORTHO05D000412 1.3e-07 60.5 117 28.2
Atru.chr2.525 Acer truncatum HOM05D000581 ORTHO05D000412 2.3e-07 59.7 117 24.8
ECA232G2591 Erigeron canadensis HOM05D000581 ORTHO05D000412 2.3e-07 59.7 103 29.1
Glyma.10G157800 Glycine max HOM05D000581 ORTHO05D000412 2.3e-07 59.7 117 26.5
Lalb_Chr06g0167851 Lupinus albus HOM05D000581 ORTHO05D000412 2.3e-07 59.7 117 25.6
CiPaw.13G139200 Carya illinoinensis HOM05D000581 ORTHO05D000412 3.0e-07 59.3 118 34.7
Migut.G00235 Erythranthe guttata HOM05D000581 ORTHO05D000412 3.0e-07 59.3 125 29.6
Glyma.20G230800 Glycine max HOM05D000581 ORTHO05D000412 3.9e-07 58.9 117 26.5
Mapoly0091s0072 Marchantia polymorpha HOM05D000581 ORTHO05D000412 3.9e-07 58.9 138 25.4
Peaxi162Scf00434g00728 Petunia axillaris HOM05D000581 ORTHO05D000412 3.9e-07 58.9 115 28.7
Solyc01g080540.3 Solanum lycopersicum HOM05D000581 ORTHO05D000412 3.9e-07 58.9 122 29.5
Gohir.D13G178400 Gossypium hirsutum HOM05D000581 ORTHO05D000412 5.0e-07 58.5 139 25.9
Gorai.013G203600 Gossypium raimondii HOM05D000581 ORTHO05D000412 5.0e-07 58.5 139 25.9
VMungo0720G0007 Vigna mungo HOM05D000581 ORTHO05D000412 5.0e-07 58.5 117 26.5
Oeu044805.1 Olea europaea HOM05D000581 ORTHO05D000412 6.6e-07 58.2 120 31.7
arahy.Tifrunner.gnm1.ann1.223T1K Arachis hypogaea HOM05D000581 ORTHO05D000412 8.6e-07 57.8 144 25.0
Lj5g0007928 Lotus japonicus HOM05D000581 ORTHO05D000412 8.6e-07 57.8 107 25.2
Manes.09G059100 Manihot esculenta HOM05D000581 ORTHO05D000412 8.6e-07 57.8 146 26.7
Ciclev10002761m.g Citrus clementina HOM05D000581 ORTHO05D000412 1.1e-06 57.4 134 26.1
Duzib177G0416 Durio zibethinus HOM05D000581 ORTHO05D000412 1.1e-06 57.4 132 27.3
FvH4_4g16820 Fragaria vesca HOM05D000581 ORTHO05D000412 1.1e-06 57.4 103 29.1
FAN12G2071 Fragaria x ananassa HOM05D000581 ORTHO05D000412 1.1e-06 57.4 103 29.1
FAN12G3718 Fragaria x ananassa HOM05D000581 ORTHO05D000412 1.1e-06 57.4 103 29.1
HanXRQChr02g0058621 Helianthus annuus HOM05D000581 ORTHO05D000412 1.1e-06 57.4 122 27.9
MD12G1226800 Malus domestica HOM05D000581 ORTHO05D000412 1.1e-06 57.4 117 28.2
Sopen01g032360 Solanum pennellii HOM05D000581 ORTHO05D000412 1.1e-06 57.4 103 30.1
Cpa.g.sc16.84 Carica papaya HOM05D000581 ORTHO05D000412 1.5e-06 57.0 125 28.0
HanXRQChr04g0112931 Helianthus annuus HOM05D000581 ORTHO05D000412 1.5e-06 57.0 117 28.2
MSTRG.21825 Avicennia marina HOM05D000581 ORTHO05D000412 1.9e-06 56.6 122 27.0
CiPaw.02G088500 Carya illinoinensis HOM05D000581 ORTHO05D000412 1.9e-06 56.6 117 29.9
Ca_13452_v3 Cicer arietinum L. HOM05D000581 ORTHO05D000412 1.9e-06 56.6 136 28.7
FAN07G2395 Fragaria x ananassa HOM05D000581 ORTHO05D000412 1.9e-06 56.6 103 28.2
MD16G1178100 Malus domestica HOM05D000581 ORTHO05D000412 1.9e-06 56.6 125 27.2
Nitab4.5_0000059g0300 Nicotiana tabacum HOM05D000581 ORTHO05D000412 1.9e-06 56.6 117 28.2
RcHm_v2.0_Chr4g0420371 Rosa chinensis HOM05D000581 ORTHO05D000412 1.9e-06 56.6 125 28.8
Sabra05G0039400 Salix brachista HOM05D000581 ORTHO05D000412 1.9e-06 56.6 130 23.8
PGSC0003DMG400032101 Solanum tuberosum HOM05D000581 ORTHO05D000412 1.9e-06 56.6 103 30.1
Thecc.04G273700 Theobroma cacao HOM05D000581 ORTHO05D000412 1.9e-06 56.6 128 30.5
Atru.chr4.2715 Acer truncatum HOM05D000581 ORTHO05D000412 2.5e-06 56.2 143 26.6
FAN22G0885 Fragaria x ananassa HOM05D000581 ORTHO05D000412 2.5e-06 56.2 103 29.1
Glyma.03G241700 Glycine max HOM05D000581 ORTHO05D000412 2.5e-06 56.2 136 23.5
Glyma.13G317900 Glycine max HOM05D000581 ORTHO05D000412 2.5e-06 56.2 139 25.2
Lj6g0021208 Lotus japonicus HOM05D000373 ORTHO05D001146 2.5e-06 56.2 125 29.6
Nitab4.5_0002093g0110 Nicotiana tabacum HOM05D000581 ORTHO05D000412 2.5e-06 56.2 101 28.7
Prupe.1G145400 Prunus persica HOM05D000581 ORTHO05D000412 2.5e-06 56.2 125 27.2
TAR627G1138 Trochodendron aralioides HOM05D000581 ORTHO05D000412 2.5e-06 56.2 136 23.5
arahy.Tifrunner.gnm1.ann1.JWG320 Arachis hypogaea HOM05D000581 ORTHO05D000412 3.3e-06 55.8 144 25.7
CAN.G1157.4 Capsicum annuum HOM05D000581 ORTHO05D000412 3.3e-06 55.8 132 26.5
CiPaw.13G138400 Carya illinoinensis HOM05D000581 ORTHO05D000412 3.3e-06 55.8 137 24.8
Eucgr.H03658 Eucalyptus grandis HOM05D000581 ORTHO05D000412 3.3e-06 55.8 117 28.2
Gohir.A13G172600 Gossypium hirsutum HOM05D000581 ORTHO05D000412 3.3e-06 55.8 142 25.4
MD13G1176300 Malus domestica HOM05D000581 ORTHO05D000412 3.3e-06 55.8 125 27.2
Potri.010G027100 Populus trichocarpa HOM05D000581 ORTHO05D000412 3.3e-06 55.8 103 26.2
Prupe.6G332500 Prunus persica HOM05D000581 ORTHO05D000412 3.3e-06 55.8 123 24.4
QL01p013207 Quercus lobata HOM05D000581 ORTHO05D000412 3.3e-06 55.8 135 27.4
Thecc.05G298100 Theobroma cacao HOM05D000581 ORTHO05D000412 3.3e-06 55.8 132 26.5
Ciclev10006135m.g Citrus clementina HOM05D000581 ORTHO05D000412 4.3e-06 55.5 117 25.6
Cc03_g02630 Coffea canephora HOM05D000581 ORTHO05D000412 4.3e-06 55.5 145 26.9
Gohir.D11G271200 Gossypium hirsutum HOM05D000581 ORTHO05D000412 4.3e-06 55.5 132 25.8
Gorai.007G291700 Gossypium raimondii HOM05D000581 ORTHO05D000412 4.3e-06 55.5 132 25.8
Medtr2g020770 Medicago truncatula HOM05D000581 ORTHO05D000412 4.3e-06 55.5 126 29.4
TPR.G18038 Trifolium pratense HOM05D000581 ORTHO05D000412 4.3e-06 55.5 125 28.0
GSVIVG01022018001 Vitis vinifera HOM05D000581 ORTHO05D000412 4.3e-06 55.5 103 27.2
Atru.chr1.2688 Acer truncatum HOM05D000581 ORTHO05D000412 5.6e-06 55.1 143 26.6
Actinidia32097 Actinidia chinensis HOM05D005013 ORTHO05D006005 5.6e-06 55.1 103 27.2
CSS0034339 Camellia sinensis var. sinensis HOM05D000581 ORTHO05D000412 5.6e-06 55.1 118 26.3
Ca_10080_v3 Cicer arietinum L. HOM05D000581 ORTHO05D000412 5.6e-06 55.1 120 25.8
ClCG06G005570 Citrullus lanatus HOM05D000581 ORTHO05D000412 5.6e-06 55.1 117 26.5
Duzib212G0159 Durio zibethinus HOM05D000581 ORTHO05D000412 5.6e-06 55.1 128 29.7
Eucgr.B01218 Eucalyptus grandis HOM05D000581 ORTHO05D000412 5.6e-06 55.1 125 28.0
Medtr1g082290 Medicago truncatula HOM05D000581 ORTHO05D000412 5.6e-06 55.1 143 24.5
TWI73G0342 Tripterygium wilfordii HOM05D000581 ORTHO05D000412 5.6e-06 55.1 117 27.4
VMungo0540G0452 Vigna mungo HOM05D000581 ORTHO05D000412 5.6e-06 55.1 139 23.0
GSVIVG01017840001 Vitis vinifera HOM05D000581 ORTHO05D000412 5.6e-06 55.1 122 27.0
Actinidia05735 Actinidia chinensis HOM05D000581 ORTHO05D000412 7.3e-06 54.7 117 25.6
MELO3C021379.2 Cucumis melo HOM05D000581 ORTHO05D000412 7.3e-06 54.7 117 26.5
CsaV3_6G005590 Cucumis sativus L. HOM05D000581 ORTHO05D000412 7.3e-06 54.7 117 26.5
Duzib128G2008 Durio zibethinus HOM05D000581 ORTHO05D000412 7.3e-06 54.7 132 25.0
Hma1.2p1_0643F.1_g194570 Hydrangea macrophylla HOM05D000581 ORTHO05D000412 7.3e-06 54.7 145 26.2
Os09g0567400 Oryza sativa ssp. japonica HOM05D000581 ORTHO05D000412 7.3e-06 54.7 117 29.1
Potri.013G028300 Populus trichocarpa HOM05D000581 ORTHO05D000412 7.3e-06 54.7 130 23.8
TWI63G1532 Tripterygium wilfordii HOM05D000581 ORTHO05D000412 7.3e-06 54.7 105 27.6
Dinv11276 Davidia involucrata HOM05D000581 ORTHO05D000412 9.5e-06 54.3 117 25.6
PGR031G1903 Punica granatum HOM05D000581 ORTHO05D000412 9.5e-06 54.3 103 28.2
Zm00001eb176120 Zea mays HOM05D000581 ORTHO05D000412 9.5e-06 54.3 134 23.9


User provided reference genes

Program Settings