Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO724G0870 Papaver somniferum HOM05D003860 ORTHO05D004218 1.1e-206 723.0 366 100.0
PSO386G0262 Papaver somniferum HOM05D003860 ORTHO05D004218 3.9e-199 698.0 361 97.2
PSO210G3069 Papaver somniferum HOM05D003860 ORTHO05D004218 2.0e-110 403.3 372 56.2
PSO675G5794 Papaver somniferum HOM05D003860 ORTHO05D004218 4.6e-99 365.5 280 66.4
PSO832G4205 Papaver somniferum HOM05D003860 ORTHO05D004218 7.7e-94 348.2 309 57.0
PSO063G5549 Papaver somniferum HOM05D003860 ORTHO05D004218 8.2e-88 328.2 460 42.8
PSO170G3926 Papaver somniferum HOM05D003860 ORTHO05D004218 5.0e-85 318.9 423 45.2
PSO386G0085 Papaver somniferum HOM05D003860 ORTHO05D004218 7.2e-84 315.1 231 72.7
PSO724G0039 Papaver somniferum HOM05D003860 ORTHO05D004218 1.4e-82 310.8 234 72.2
PSO724G0326 Papaver somniferum HOM05D003860 ORTHO05D004218 1.6e-78 297.4 388 44.6
PSO386G0027 Papaver somniferum HOM05D003860 ORTHO05D004218 7.5e-73 278.5 371 45.0
TAR365G0731 Trochodendron aralioides HOM05D003860 ORTHO05D004218 3.7e-72 276.2 371 44.2
Actinidia05456 Actinidia chinensis HOM05D003860 ORTHO05D004218 6.5e-69 265.4 367 41.1
CSS0040755 Camellia sinensis var. sinensis HOM05D003860 ORTHO05D004218 8.5e-69 265.0 389 42.2
Prupe.1G033500 Prunus persica HOM05D003860 ORTHO05D004218 2.5e-68 263.5 368 42.1
MD16G1211400 Malus domestica HOM05D003860 ORTHO05D004218 5.5e-68 262.3 367 42.2
RcHm_v2.0_Chr5g0051721 Rosa chinensis HOM05D003860 ORTHO05D004218 9.4e-68 261.5 369 42.5
Atru.chr4.2181 Acer truncatum HOM05D003860 ORTHO05D004218 2.1e-67 260.4 365 41.1
FAN25G1720 Fragaria x ananassa HOM05D003860 ORTHO05D004218 1.7e-64 250.8 364 40.9
Nn1g02668 Nelumbo nucifera HOM05D003860 ORTHO05D004218 7.0e-63 245.4 415 38.1
Lj3C795G8 Lonicera japonica HOM05D003860 ORTHO05D004218 1.2e-62 244.6 385 39.5
Potri.008G163500 Populus trichocarpa HOM05D003860 ORTHO05D004218 2.0e-62 243.8 365 39.7
PGSC0003DMG400013397 Solanum tuberosum HOM05D003860 ORTHO05D004218 5.9e-62 242.3 373 38.9
FvH4_3g28990 Fragaria vesca HOM05D003860 ORTHO05D004218 1.0e-61 241.5 366 39.6
Nitab4.5_0000436g0080 Nicotiana tabacum HOM05D003860 ORTHO05D004218 2.2e-61 240.4 379 37.5
Aqoxy2G03595 Aquilegia oxysepala HOM05D003860 ORTHO05D004218 2.9e-61 240.0 373 40.2
FAN11G1859 Fragaria x ananassa HOM05D003860 ORTHO05D004218 2.9e-61 240.0 365 40.0
Hund04555 Selenicereus undatus HOM05D003860 ORTHO05D004218 2.9e-61 240.0 376 39.9
Sc19g0003450 Simmondsia chinensis HOM05D003860 ORTHO05D004218 5.0e-61 239.2 374 40.1
MBI01_g26745_MAGBIO Magnolia biondii HOM05D003860 ORTHO05D004218 8.5e-61 238.4 378 39.4
Thecc.04G247900 Theobroma cacao HOM05D003860 ORTHO05D004218 1.5e-60 237.7 361 38.8
FAN21G0272 Fragaria x ananassa HOM05D003860 ORTHO05D004218 3.2e-60 236.5 365 39.2
TWI09G0161 Tripterygium wilfordii HOM05D003860 ORTHO05D004218 4.2e-60 236.1 371 38.8
Sopen03g001470 Solanum pennellii HOM05D003860 ORTHO05D004218 5.5e-60 235.7 373 37.5
Solyc03g005440.3 Solanum lycopersicum HOM05D003860 ORTHO05D004218 1.2e-59 234.6 373 37.3
Dinv29898 Davidia involucrata HOM05D003860 ORTHO05D004218 2.1e-59 233.8 286 45.8
Gorai.012G021000 Gossypium raimondii HOM05D003860 ORTHO05D004218 3.0e-58 229.9 364 39.0
Nitab4.5_0003331g0100 Nicotiana tabacum HOM05D003860 ORTHO05D004218 3.0e-58 229.9 384 34.9
Gohir.D04G018000 Gossypium hirsutum HOM05D003860 ORTHO05D004218 5.2e-58 229.2 364 39.0
arahy.Tifrunner.gnm1.ann1.5VC0H5 Arachis hypogaea HOM05D003860 ORTHO05D004218 6.8e-58 228.8 363 36.9
QL06p016008 Quercus lobata HOM05D003860 ORTHO05D004218 2.0e-57 227.3 415 36.9
Gohir.A05G398000 Gossypium hirsutum HOM05D003860 ORTHO05D004218 4.4e-57 226.1 369 38.8
RcHm_v2.0_Chr7g0211841 Rosa chinensis HOM05D003860 ORTHO05D004218 5.7e-57 225.7 393 39.4
arahy.Tifrunner.gnm1.ann1.IPZV7K Arachis hypogaea HOM05D003860 ORTHO05D004218 7.5e-57 225.3 369 37.1
Rhsim04G0189100 Rhododendron simsii HOM05D003860 ORTHO05D004218 1.7e-56 224.2 369 36.6
TPR.G34114 Trifolium pratense HOM05D003860 ORTHO05D004218 1.7e-56 224.2 358 37.4
RcHm_v2.0_Chr4g0391121 Rosa chinensis HOM05D003860 ORTHO05D004218 2.2e-56 223.8 402 37.3
MSTRG.9921 Avicennia marina HOM05D003860 ORTHO05D004218 4.9e-56 222.6 378 36.5
AUR62015467 Chenopodium quinoa HOM05D003860 ORTHO05D004218 6.3e-56 222.2 375 37.6
Cc03_g05000 Coffea canephora HOM05D003860 ORTHO05D004218 1.1e-55 221.5 372 36.0
CAN.G638.70 Capsicum annuum HOM05D003860 ORTHO05D004218 2.4e-55 220.3 378 35.7
Hund11859 Selenicereus undatus HOM05D003860 ORTHO05D004218 4.1e-55 219.5 345 38.3
Lj3g0013538 Lotus japonicus HOM05D003860 ORTHO05D004218 5.4e-55 219.2 361 38.2
Phvul.002G055200 Phaseolus vulgaris HOM05D003860 ORTHO05D004218 9.2e-55 218.4 362 37.8
Lsat_1_v5_gn_5_71460 Lactuca sativa HOM05D003860 ORTHO05D004218 2.0e-54 217.2 356 37.1
Oeu008802.1 Olea europaea HOM05D003860 ORTHO05D004218 2.0e-54 217.2 388 35.3
Lalb_Chr03g0043921 Lupinus albus HOM05D003860 ORTHO05D004218 4.5e-54 216.1 357 35.0
Glyma.12G000500 Glycine max HOM05D003860 ORTHO05D004218 5.9e-54 215.7 361 36.0
Psat7g227280 Pisum sativum HOM05D003860 ORTHO05D004218 5.9e-54 215.7 363 36.6
Peaxi162Scf00019g03122 Petunia axillaris HOM05D003860 ORTHO05D004218 7.8e-54 215.3 358 34.4
Eucgr.H03148 Eucalyptus grandis HOM05D003860 ORTHO05D004218 5.0e-53 212.6 363 38.0
Lsat_1_v5_gn_5_72621 Lactuca sativa HOM05D003860 ORTHO05D004218 6.6e-53 212.2 358 36.3
vmacro08440 Vaccinium macrocarpon HOM05D003860 ORTHO05D004218 6.6e-53 212.2 376 37.8
PGR004G1248 Punica granatum HOM05D003860 ORTHO05D004218 8.6e-53 211.8 194 50.0
SalBow2G1275 Salvia bowleyana HOM05D003860 ORTHO05D004218 3.3e-52 209.9 361 37.1
DCAR_027287 Daucus carota HOM05D003860 ORTHO05D004218 4.3e-52 209.5 385 35.6
Peaxi162Scf00204g00115 Petunia axillaris HOM05D003860 ORTHO05D004218 4.3e-52 209.5 355 36.1
Ah.07g207450 Amaranthus hybridus HOM05D003860 ORTHO05D004218 2.8e-51 206.8 357 35.0
CDE02G3490 Ceratophyllum demersum HOM05D003860 ORTHO05D004218 3.6e-51 206.5 176 50.0
GSVIVG01018132001 Vitis vinifera HOM05D003860 ORTHO05D004218 3.6e-51 206.5 194 50.5
EL10Ac3g05899 Beta vulgaris HOM05D003860 ORTHO05D004218 6.1e-51 205.7 446 33.0
Medtr4g032190 Medicago truncatula HOM05D003860 ORTHO05D004218 6.1e-51 205.7 364 34.3
MELO3C026783.2 Cucumis melo HOM05D003860 ORTHO05D004218 1.4e-50 204.5 366 36.6
Sed0002683 Sechium edule HOM05D003860 ORTHO05D004218 3.0e-50 203.4 364 36.5
Duzib114G0251 Durio zibethinus HOM05D003860 ORTHO05D004218 1.7e-48 197.6 467 32.8
Lsat_1_v5_gn_5_72601 Lactuca sativa HOM05D003860 ORTHO05D004218 2.2e-48 197.2 193 49.2
Sabra08G0124700 Salix brachista HOM05D003860 ORTHO05D004218 2.2e-48 197.2 198 46.5
CANSAT78G0297 Cannabis sativa HOM05D003860 ORTHO05D004218 4.9e-48 196.1 440 32.3
CiPaw.02G115700 Carya illinoinensis HOM05D003860 ORTHO05D004218 1.8e-47 194.1 371 36.1
GSVIVG01017372001 Vitis vinifera HOM05D003860 ORTHO05D004218 1.8e-47 194.1 182 51.1
Rhsim02G0034600 Rhododendron simsii HOM05D003860 ORTHO05D004218 5.4e-47 192.6 450 32.0
Nitab4.5_0009720g0020 Nicotiana tabacum HOM05D003860 ORTHO05D004218 9.5e-44 181.8 439 29.4
SalBow6G3557 Salvia bowleyana HOM05D003860 ORTHO05D004218 1.0e-42 178.3 172 45.9
THA.LOC104798705 Tarenaya hassleriana HOM05D003860 ORTHO05D004218 1.8e-42 177.6 208 42.3
Sopen09g032490 Solanum pennellii HOM05D003860 ORTHO05D004218 2.3e-42 177.2 197 40.6
Zm00001eb108590 Zea mays HOM05D003860 ORTHO05D004218 2.3e-42 177.2 180 44.4
HPP92_016098 Vanilla planifolia HOM05D003860 ORTHO05D004218 7.5e-41 172.2 177 44.6
Manes.03G168100 Manihot esculenta HOM05D003860 ORTHO05D004218 6.4e-40 169.1 315 36.5
SalBow2G2538 Salvia bowleyana HOM05D003860 ORTHO05D004218 1.4e-39 167.9 253 39.1
ECA233G4435 Erigeron canadensis HOM05D003860 ORTHO05D004218 1.9e-39 167.5 233 40.3
PGSC0003DMG400017259 Solanum tuberosum HOM05D003860 ORTHO05D004218 1.9e-39 167.5 371 29.6
Haze_11316 Corylus avellana HOM05D003860 ORTHO05D004218 4.1e-39 166.4 260 37.3
Solyc09g089570.4 Solanum lycopersicum HOM05D003860 ORTHO05D004218 4.1e-39 166.4 176 41.5
COL.COLO4_20681 Corchorus olitorius HOM05D003860 ORTHO05D004218 2.7e-38 163.7 327 33.9
CARHR265010 Cardamine hirsuta HOM05D003860 ORTHO05D004218 6.0e-38 162.5 191 41.9
HanXRQChr12g0378901 Helianthus annuus HOM05D003860 ORTHO05D004218 6.6e-37 159.1 357 30.8
ClCG06G006760 Citrullus lanatus HOM05D003860 ORTHO05D004218 1.1e-36 158.3 287 35.2
HanXRQChr12g0386161 Helianthus annuus HOM05D003860 ORTHO05D004218 1.5e-36 157.9 360 31.7
Peaxi162Scf00024g00515 Petunia axillaris HOM05D003860 ORTHO05D004218 1.9e-36 157.5 358 29.6
Carub.0008s0633 Capsella rubella HOM05D003860 ORTHO05D004218 3.3e-36 156.8 190 37.9
AL8G18530 Arabidopsis lyrata HOM05D003860 ORTHO05D004218 2.1e-35 154.1 188 39.9
Haze_11318 Corylus avellana HOM05D003860 ORTHO05D004218 2.8e-35 153.7 142 52.1
AT5G42670 Arabidopsis thaliana HOM05D003860 ORTHO05D004218 6.2e-35 152.5 179 43.0
CARHR156760 Cardamine hirsuta HOM05D003860 ORTHO05D004218 8.1e-35 152.1 176 43.8
unitig_32.g10833 Utricularia gibba HOM05D003860 ORTHO05D004218 1.8e-34 151.0 367 29.7
Carub.0008s1217 Capsella rubella HOM05D003860 ORTHO05D004218 3.1e-34 150.2 192 40.6
SGA_v2.0_scaffold101G29803 Striga asiatica HOM05D003860 ORTHO05D004218 3.1e-34 150.2 367 31.9
Thhalv10014347m.g Eutrema salsugineum HOM05D003860 ORTHO05D004218 4.0e-34 149.8 192 37.0
Sp2g07130 Schrenkiella parvula HOM05D003860 ORTHO05D004218 4.0e-34 149.8 177 43.5
Ca_19732_v3 Cicer arietinum L. HOM05D003860 ORTHO05D004218 5.2e-34 149.4 144 47.9
BcaB01g04181 Brassica carinata HOM05D003860 ORTHO05D004218 8.9e-34 148.7 173 39.3
AUR62002255 Chenopodium quinoa HOM05D003860 ORTHO05D004218 2.0e-33 147.5 384 32.3
Aa31LG3G8460 Aethionema arabicum HOM05D003860 ORTHO05D004218 3.4e-33 146.7 201 40.3
BraA03t10876Z Brassica rapa HOM05D003860 ORTHO05D004218 3.4e-33 146.7 173 37.6
SpUn0060_0020 Schrenkiella parvula HOM05D003860 ORTHO05D004218 4.4e-33 146.4 173 39.3
AL8G26450 Arabidopsis lyrata HOM05D003860 ORTHO05D004218 9.8e-33 145.2 193 39.4
BcaC01g06158 Brassica carinata HOM05D003860 ORTHO05D004218 1.7e-32 144.4 173 37.6
HanXRQChr16g0514681 Helianthus annuus HOM05D003860 ORTHO05D004218 6.4e-32 142.5 363 30.6
BcaB07g31066 Brassica carinata HOM05D003860 ORTHO05D004218 1.4e-31 141.4 188 41.5
BcaB07g31067 Brassica carinata HOM05D003860 ORTHO05D004218 1.4e-31 141.4 188 41.5
Mapoly0001s0415 Marchantia polymorpha HOM05D003860 ORTHO05D004218 3.2e-31 140.2 194 39.2
C02p19970 Brassica napus HOM05D003860 ORTHO05D004218 5.4e-31 139.4 173 38.7
BolC2t08132H Brassica oleracea HOM05D003860 ORTHO05D004218 5.4e-31 139.4 173 38.7
ATR0665G258 Amborella trichopoda HOM05D003860 ORTHO05D004218 7.1e-31 139.0 270 34.1
BolC9t55408H Brassica oleracea HOM05D003860 ORTHO05D004218 9.2e-31 138.7 199 39.7
Ciclev10005898m.g Citrus clementina HOM05D003860 ORTHO05D004218 9.2e-31 138.7 174 41.4
BcaB01g04182 Brassica carinata HOM05D003860 ORTHO05D004218 1.6e-30 137.9 173 39.3
A02p11970 Brassica napus HOM05D003860 ORTHO05D004218 1.6e-30 137.9 173 38.7
Peaxi162Scf01247g00111 Petunia axillaris HOM05D003860 ORTHO05D004218 1.6e-30 137.9 287 31.7
BraA02t06261Z Brassica rapa HOM05D003860 ORTHO05D004218 4.6e-30 136.3 175 40.0
C09p25140 Brassica napus HOM05D003860 ORTHO05D004218 1.7e-29 134.4 195 37.9
BraA09t37590Z Brassica rapa HOM05D003860 ORTHO05D004218 2.3e-29 134.0 180 40.6
A09p19840 Brassica napus HOM05D003860 ORTHO05D004218 3.9e-29 133.3 180 40.6
BcaC04g21988 Brassica carinata HOM05D003860 ORTHO05D004218 6.6e-29 132.5 180 39.4
Os05g0140600 Oryza sativa ssp. japonica HOM05D003860 ORTHO05D004218 6.6e-29 132.5 193 36.3
BcaC06g31848 Brassica carinata HOM05D003860 ORTHO05D004218 1.5e-28 131.3 171 39.8
Pp3c1_19590 Physcomitrium patens HOM05D003860 ORTHO05D004218 9.9e-25 118.6 181 36.5
SEGI_04428 Sequoiadendron giganteum HOM05D003860 ORTHO05D004218 4.9e-24 116.3 138 37.0
Lsat_1_v5_gn_7_62061 Lactuca sativa HOM05D003860 ORTHO05D004218 6.4e-24 115.9 94 51.1
Mapoly0013s0014 Marchantia polymorpha HOM05D003860 ORTHO05D004218 6.4e-24 115.9 190 33.7
BcaC03g14550 Brassica carinata HOM05D003860 ORTHO05D004218 5.4e-23 112.8 173 34.1
SalBow5G0294 Salvia bowleyana HOM05D003860 ORTHO05D004218 2.7e-22 110.5 104 48.1
PGSC0003DMG400005308 Solanum tuberosum HOM05D003860 ORTHO05D004218 2.7e-22 110.5 98 44.9
A03p15860 Brassica napus HOM05D003860 ORTHO05D004218 5.1e-21 106.3 131 35.9
C03p18580 Brassica napus HOM05D003860 ORTHO05D004218 8.6e-21 105.5 131 35.9
BolC3t14252H Brassica oleracea HOM05D003860 ORTHO05D004218 8.6e-21 105.5 131 35.9
Lsat_1_v5_gn_2_69300 Lactuca sativa HOM05D003860 ORTHO05D004218 3.3e-20 103.6 173 36.4
AagrBONN_evm.TU.Sc2ySwM_368.1422 Anthoceros agrestis HOM05D003860 ORTHO05D004218 1.6e-19 101.3 185 32.4
SHI00610 Sapria himalayana HOM05D003860 ORTHO05D004218 8.1e-19 99.0 102 43.1
Zm00001eb417650 Zea mays HOM05D003860 ORTHO05D004218 1.4e-18 98.2 155 34.2
Sp6g14330 Schrenkiella parvula HOM05D003860 ORTHO05D004218 1.8e-18 97.8 98 41.8
AT5G52070 Arabidopsis thaliana HOM05D003860 ORTHO05D004218 1.5e-17 94.7 111 42.3
BcaC01g06162 Brassica carinata HOM05D003860 ORTHO05D004218 7.6e-17 92.4 131 35.1
AagrBONN_evm.TU.Sc2ySwM_117.2824 Anthoceros agrestis HOM05D003860 ORTHO05D004218 3.8e-16 90.1 132 34.8
SMO358G0545 Selaginella moellendorffii HOM05D003860 ORTHO05D004218 4.2e-15 86.7 131 35.1
CBR_g50140 Chara braunii HOM05D003860 ORTHO05D004218 9.3e-15 85.5 131 32.8
CARHR181580 Cardamine hirsuta HOM05D003860 ORTHO05D004218 4.6e-14 83.2 145 34.5
VMungo0251G0597 Vigna mungo HOM05D003860 ORTHO05D004218 1.3e-13 81.6 218 29.8
HPP92_016073 Vanilla planifolia HOM05D003860 ORTHO05D004218 1.8e-10 71.2 67 44.8
Cpa.g.sc126.47 Carica papaya HOM05D003860 ORTHO05D004218 2.4e-10 70.9 48 60.4
Ciclev10007055m.g Citrus clementina HOM05D003860 ORTHO05D004218 4.9e-08 63.2 51 56.9
PSO026G0003 Papaver somniferum HOM05D020174 ORTHO05D004218 8.4e-08 62.4 40 67.5
PSO541G0200 Papaver somniferum HOM05D020174 ORTHO05D004218 8.4e-08 62.4 40 67.5
PSO541G5719 Papaver somniferum HOM05D020174 ORTHO05D004218 8.4e-08 62.4 40 67.5
PSO541G5150 Papaver somniferum HOM05D020174 ORTHO05D004218 4.2e-07 60.1 40 65.0
CANSAT11G1840 Cannabis sativa HOM05D000621 ORTHO05D000421 9.3e-07 58.9 170 25.3
FvH4_3g26751 Fragaria vesca HOM05D003860 ORTHO05D004218 9.3e-07 58.9 46 56.5
PSO541G0053 Papaver somniferum HOM05D020174 ORTHO05D004218 1.2e-06 58.5 40 62.5
Cpa.g.sc126.45 Carica papaya HOM05D003860 ORTHO05D004218 7.9e-06 55.8 52 51.9


User provided reference genes

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