Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO724G0807 Papaver somniferum HOM05D005557 ORTHO05D006748 1.2e-147 526.6 272 100.0
PSO386G0114 Papaver somniferum HOM05D005557 ORTHO05D006748 6.9e-108 394.4 269 79.9
Ciclev10009013m.g Citrus clementina HOM05D005557 ORTHO05D006748 7.8e-43 178.3 272 45.6
RcHm_v2.0_Chr1g0332351 Rosa chinensis HOM05D005557 ORTHO05D006748 7.8e-43 178.3 153 62.1
Dinv42413 Davidia involucrata HOM05D005557 ORTHO05D006748 1.7e-42 177.2 264 44.7
Aqoxy3G00735 Aquilegia oxysepala HOM05D005557 ORTHO05D006748 2.3e-42 176.8 265 43.0
FvH4_7g05500 Fragaria vesca HOM05D005557 ORTHO05D006748 2.3e-42 176.8 153 62.1
FAN01G0749 Fragaria x ananassa HOM05D005557 ORTHO05D006748 2.3e-42 176.8 153 62.1
FAN03G2003 Fragaria x ananassa HOM05D005557 ORTHO05D006748 2.3e-42 176.8 153 62.1
FAN10G4084 Fragaria x ananassa HOM05D005557 ORTHO05D006748 2.3e-42 176.8 153 62.1
MD02G1257100 Malus domestica HOM05D005557 ORTHO05D006748 3.0e-42 176.4 153 61.4
TAR626G1135 Trochodendron aralioides HOM05D005557 ORTHO05D006748 8.6e-42 174.9 264 40.9
Nitab4.5_0008784g0050 Nicotiana tabacum HOM05D005557 ORTHO05D006748 1.5e-41 174.1 155 58.1
QL11p001232 Quercus lobata HOM05D005557 ORTHO05D006748 1.5e-41 174.1 269 44.6
Nitab4.5_0000343g0390 Nicotiana tabacum HOM05D005557 ORTHO05D006748 1.9e-41 173.7 167 54.5
GSVIVG01015048001 Vitis vinifera HOM05D005557 ORTHO05D006748 1.9e-41 173.7 152 61.2
TAR624G0952 Trochodendron aralioides HOM05D005557 ORTHO05D006748 2.5e-41 173.3 206 49.5
CiPaw.03G203700 Carya illinoinensis HOM05D005557 ORTHO05D006748 4.3e-41 172.6 264 42.8
Hma1.2p1_0169F.1_g074410 Hydrangea macrophylla HOM05D005557 ORTHO05D006748 4.3e-41 172.6 170 55.9
Thecc.08G180200 Theobroma cacao HOM05D005557 ORTHO05D006748 5.6e-41 172.2 267 44.6
Prupe.2G075400 Prunus persica HOM05D005557 ORTHO05D006748 1.6e-40 170.6 153 58.8
Dinv25539 Davidia involucrata HOM05D005557 ORTHO05D006748 2.1e-40 170.2 172 54.7
TWI32G1325 Tripterygium wilfordii HOM05D005557 ORTHO05D006748 2.1e-40 170.2 264 42.0
MD07G1063400 Malus domestica HOM05D005557 ORTHO05D006748 3.6e-40 169.5 153 60.1
Duzib168G0027 Durio zibethinus HOM05D005557 ORTHO05D006748 4.7e-40 169.1 157 58.6
Peaxi162Scf00880g00018 Petunia axillaris HOM05D005557 ORTHO05D006748 8.1e-40 168.3 161 54.7
Potri.006G139800 Populus trichocarpa HOM05D005557 ORTHO05D006748 8.1e-40 168.3 266 42.1
Gohir.A06G078200 Gossypium hirsutum HOM05D005557 ORTHO05D006748 1.1e-39 167.9 157 58.6
Rhsim05G0005000 Rhododendron simsii HOM05D000173 ORTHO05D006748 1.1e-39 167.9 264 42.0
PGSC0003DMG400016040 Solanum tuberosum HOM05D005557 ORTHO05D006748 1.8e-39 167.2 172 52.3
Atru.chr7.1734 Acer truncatum HOM05D005557 ORTHO05D006748 2.3e-39 166.8 264 43.9
Cfa002966 Carpinus fangiana HOM05D000173 ORTHO05D006748 3.1e-39 166.4 265 44.2
DCAR_024765 Daucus carota HOM05D005557 ORTHO05D006748 4.0e-39 166.0 155 56.1
Sopen07g021740 Solanum pennellii HOM05D005557 ORTHO05D006748 4.0e-39 166.0 282 40.8
SalBow6G3747 Salvia bowleyana HOM05D005557 ORTHO05D006748 6.8e-39 165.2 164 54.3
vmacro17121 Vaccinium macrocarpon HOM05D000173 ORTHO05D006748 6.8e-39 165.2 264 40.9
CANSAT56G2230 Cannabis sativa HOM05D005557 ORTHO05D006748 8.9e-39 164.9 161 52.8
Manes.03G042000 Manihot esculenta HOM05D005557 ORTHO05D006748 8.9e-39 164.9 166 53.0
TWI63G1120 Tripterygium wilfordii HOM05D005557 ORTHO05D006748 8.9e-39 164.9 264 42.0
Gorai.010G090300 Gossypium raimondii HOM05D005557 ORTHO05D006748 1.2e-38 164.5 272 44.1
Solyc07g042150.3 Solanum lycopersicum HOM05D005557 ORTHO05D006748 1.2e-38 164.5 282 40.8
Gohir.D06G077200 Gossypium hirsutum HOM05D005557 ORTHO05D006748 1.5e-38 164.1 272 43.8
CSS0017494 Camellia sinensis var. sinensis HOM05D005557 ORTHO05D006748 2.6e-38 163.3 265 43.4
Cpa.g.sc28.12 Carica papaya HOM05D005557 ORTHO05D006748 1.3e-37 161.0 173 51.4
Phvul.003G129500 Phaseolus vulgaris HOM05D005557 ORTHO05D006748 2.2e-37 160.2 151 55.6
THA.LOC104815688 Tarenaya hassleriana HOM05D005557 ORTHO05D006748 2.2e-37 160.2 156 55.8
arahy.Tifrunner.gnm1.ann1.568RE3 Arachis hypogaea HOM05D005557 ORTHO05D006748 3.8e-37 159.5 148 56.1
Migut.J00918 Erythranthe guttata HOM05D005557 ORTHO05D006748 3.8e-37 159.5 191 51.3
Lalb_Chr13g0299361 Lupinus albus HOM05D005557 ORTHO05D006748 3.8e-37 159.5 270 40.4
Sabra06G0109200 Salix brachista HOM05D005557 ORTHO05D006748 3.8e-37 159.5 214 44.9
arahy.Tifrunner.gnm1.ann1.C56SYK Arachis hypogaea HOM05D005557 ORTHO05D006748 4.9e-37 159.1 148 56.1
Cc06_g12460 Coffea canephora HOM05D005557 ORTHO05D006748 4.9e-37 159.1 264 40.5
SEGI_32471 Sequoiadendron giganteum HOM05D005557 ORTHO05D006748 4.9e-37 159.1 166 51.8
Glyma.13G111700 Glycine max HOM05D005557 ORTHO05D006748 8.4e-37 158.3 152 53.9
Sc18g0002770 Simmondsia chinensis HOM05D005557 ORTHO05D006748 8.4e-37 158.3 277 41.9
CAN.G32.9 Capsicum annuum HOM05D005557 ORTHO05D006748 1.1e-36 157.9 173 49.7
ClCG03G014930 Citrullus lanatus HOM05D005557 ORTHO05D006748 1.4e-36 157.5 269 42.0
PGR142G2674 Punica granatum HOM05D005557 ORTHO05D006748 1.4e-36 157.5 206 48.5
AL1G31720 Arabidopsis lyrata HOM05D005557 ORTHO05D006748 2.4e-36 156.8 161 52.8
Glyma.17G048000 Glycine max HOM05D005557 ORTHO05D006748 4.1e-36 156.0 152 53.3
VMungo1215G1068 Vigna mungo HOM05D005557 ORTHO05D006748 4.1e-36 156.0 270 39.3
AT1G19140 Arabidopsis thaliana HOM05D005557 ORTHO05D006748 5.4e-36 155.6 161 52.2
A06p15270 Brassica napus HOM05D005557 ORTHO05D006748 5.4e-36 155.6 164 50.0
BraA06t24641Z Brassica rapa HOM05D005557 ORTHO05D006748 5.4e-36 155.6 164 50.0
Lj4g0021187 Lotus japonicus HOM05D005557 ORTHO05D006748 5.4e-36 155.6 162 53.1
Aa31LG7G3880 Aethionema arabicum HOM05D005557 ORTHO05D006748 7.1e-36 155.2 217 43.8
HPP92_013279 Vanilla planifolia HOM05D005557 ORTHO05D006748 7.1e-36 155.2 159 52.8
BolC5t30454H Brassica oleracea HOM05D005557 ORTHO05D006748 9.2e-36 154.8 217 42.4
FAN10G0153 Fragaria x ananassa HOM05D005557 ORTHO05D006748 9.2e-36 154.8 153 58.2
Aqoxy7G00284 Aquilegia oxysepala HOM05D005557 ORTHO05D006748 1.2e-35 154.5 154 55.2
Thhalv10008278m.g Eutrema salsugineum HOM05D005557 ORTHO05D006748 1.2e-35 154.5 267 37.5
BcaB07g31927 Brassica carinata HOM05D005557 ORTHO05D006748 1.6e-35 154.1 165 49.7
C05p17510 Brassica napus HOM05D005557 ORTHO05D006748 1.6e-35 154.1 167 50.3
CARHR019740 Cardamine hirsuta HOM05D005557 ORTHO05D006748 1.6e-35 154.1 161 51.6
Actinidia30238 Actinidia chinensis HOM05D005557 ORTHO05D006748 2.1e-35 153.7 266 41.0
CDE05G0257 Ceratophyllum demersum HOM05D005557 ORTHO05D006748 2.7e-35 153.3 168 50.0
BcaC05g25811 Brassica carinata HOM05D005557 ORTHO05D006748 3.5e-35 152.9 167 49.7
Lalb_Chr07g0181281 Lupinus albus HOM05D005557 ORTHO05D006748 3.5e-35 152.9 268 39.6
EL10Ac8g19008 Beta vulgaris HOM05D005557 ORTHO05D006748 4.6e-35 152.5 265 40.0
BraA08t34934Z Brassica rapa HOM05D005557 ORTHO05D006748 4.6e-35 152.5 166 49.4
AUR62028302 Chenopodium quinoa HOM05D005557 ORTHO05D006748 4.6e-35 152.5 155 54.2
A08p29990 Brassica napus HOM05D005557 ORTHO05D006748 6.0e-35 152.1 166 50.0
COL.COLO4_18069 Corchorus olitorius HOM05D005557 ORTHO05D006748 7.8e-35 151.8 142 59.2
Eucgr.C00788 Eucalyptus grandis HOM05D005557 ORTHO05D006748 7.8e-35 151.8 151 53.0
Sp1g17050 Schrenkiella parvula HOM05D005557 ORTHO05D006748 7.8e-35 151.8 161 50.9
SGA_v2.0_scaffold31G12665 Striga asiatica HOM05D005557 ORTHO05D006748 7.8e-35 151.8 166 51.2
TPR.G12564 Trifolium pratense HOM05D005557 ORTHO05D006748 7.8e-35 151.8 159 50.9
BcaC07g38981 Brassica carinata HOM05D005557 ORTHO05D006748 1.0e-34 151.4 182 46.7
HanXRQChr12g0354431 Helianthus annuus HOM05D005557 ORTHO05D006748 1.3e-34 151.0 150 56.0
BcaB03g12934 Brassica carinata HOM05D005557 ORTHO05D006748 1.7e-34 150.6 152 52.0
MELO3C015535.2 Cucumis melo HOM05D005557 ORTHO05D006748 1.7e-34 150.6 274 40.5
BolC8t49542H Brassica oleracea HOM05D005557 ORTHO05D006748 2.3e-34 150.2 147 53.7
Lj7A689T78 Lonicera japonica HOM05D005557 ORTHO05D006748 3.0e-34 149.8 265 40.8
Sed0003389 Sechium edule HOM05D005557 ORTHO05D006748 3.0e-34 149.8 269 40.9
ATR1100G017 Amborella trichopoda HOM05D005557 ORTHO05D006748 3.9e-34 149.4 168 52.4
C08p19230 Brassica napus HOM05D005557 ORTHO05D006748 3.9e-34 149.4 147 53.7
CsaV3_1G041220 Cucumis sativus L. HOM05D005557 ORTHO05D006748 6.6e-34 148.7 271 41.0
MSTRG.10500 Avicennia marina HOM05D005557 ORTHO05D006748 8.6e-34 148.3 162 49.4
Carub.0001s1877 Capsella rubella HOM05D005557 ORTHO05D006748 1.1e-33 147.9 209 43.5
Psat7g057840 Pisum sativum HOM05D005557 ORTHO05D006748 1.9e-33 147.1 152 51.3
SGA_v2.0_scaffold296G47553 Striga asiatica HOM05D005557 ORTHO05D006748 1.9e-33 147.1 254 41.3
Lsat_1_v5_gn_5_139800 Lactuca sativa HOM05D005557 ORTHO05D006748 3.3e-33 146.4 166 50.6
Medtr4g125000 Medicago truncatula HOM05D005557 ORTHO05D006748 4.3e-33 146.0 162 50.0
Os03g0405100 Oryza sativa ssp. japonica HOM05D005557 ORTHO05D006748 4.3e-33 146.0 149 52.3
Duzib187G0437 Durio zibethinus HOM05D005557 ORTHO05D006748 5.6e-33 145.6 266 40.6
unitig_85.g27246 Utricularia gibba HOM05D005557 ORTHO05D006748 5.6e-33 145.6 171 48.0
ECA234G3626 Erigeron canadensis HOM05D005557 ORTHO05D006748 4.7e-32 142.5 166 48.8
BcaB03g12932 Brassica carinata HOM05D005557 ORTHO05D006748 1.4e-31 141.0 178 46.1
Zm00001eb019520 Zea mays HOM05D005557 ORTHO05D006748 1.4e-31 141.0 145 51.7
Ca_09310_v3 Cicer arietinum L. HOM05D005557 ORTHO05D006748 2.0e-30 137.1 265 37.0
CSS0008332 Camellia sinensis var. sinensis HOM05D005557 ORTHO05D006748 5.8e-30 135.6 265 40.0
Haze_26037 Corylus avellana HOM05D000173 ORTHO05D000316 1.7e-29 134.0 155 49.0
Hund26090 Selenicereus undatus HOM05D005557 ORTHO05D006748 4.2e-28 129.4 158 46.8
SMO364G0522 Selaginella moellendorffii HOM05D005557 ORTHO05D006748 5.4e-28 129.0 149 47.0
Actinidia39641 Actinidia chinensis HOM05D005557 ORTHO05D006748 7.1e-28 128.6 215 41.4
CANSAT56G3371 Cannabis sativa HOM05D005557 ORTHO05D006748 2.1e-27 127.1 168 45.2
Pp3c26_10620 Physcomitrium patens HOM05D005557 ORTHO05D006748 4.6e-27 125.9 149 45.0
Mapoly0016s0081 Marchantia polymorpha HOM05D005557 ORTHO05D006748 5.1e-26 122.5 173 41.0
arahy.Tifrunner.gnm1.ann1.D619LQ Arachis hypogaea HOM05D005557 ORTHO05D006748 1.1e-23 114.8 134 46.3
AagrBONN_evm.TU.Sc2ySwM_228.4614 Anthoceros agrestis HOM05D005557 ORTHO05D006748 3.8e-21 106.3 146 43.2
Thecc.09G074000 Theobroma cacao HOM05D005557 ORTHO05D006748 3.8e-21 106.3 124 46.0
AagrBONN_evm.TU.Sc2ySwM_228.5739 Anthoceros agrestis HOM05D005557 ORTHO05D006748 1.3e-18 97.8 145 42.8
CBR_g19881 Chara braunii HOM05D005557 ORTHO05D006748 1.8e-18 97.4 142 40.8
MBI13_g00696_MAGBIO Magnolia biondii HOM05D005557 ORTHO05D006748 1.1e-17 94.7 73 65.8
Nn1g06537 Nelumbo nucifera HOM05D005557 ORTHO05D006748 1.8e-15 87.4 66 65.2
AUR62025296 Chenopodium quinoa HOM05D005557 ORTHO05D006748 3.1e-15 86.7 72 59.7
Migut.J00920 Erythranthe guttata HOM05D005557 ORTHO05D006748 2.6e-14 83.6 94 53.2
SHI52085 Sapria himalayana HOM05D005557 ORTHO05D006748 6.0e-11 72.4 72 51.4
Migut.J00958 Erythranthe guttata HOM05D005557 ORTHO05D006748 4.3e-09 66.2 89 47.2
MBI13_g00695_MAGBIO Magnolia biondii HOM05D005557 ORTHO05D006748 4.0e-07 59.7 111 36.9
PRCOL_00004586 Prasinoderma coloniale HOM05D005557 ORTHO05D006748 2.6e-06 57.0 146 28.8
C09p50170 Brassica napus HOM05D002376 ORTHO05D004654 4.5e-06 56.2 37 67.6
BraA07t29264Z Brassica rapa HOM05D005557 ORTHO05D027294 7.6e-06 55.5 42 61.9


User provided reference genes

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