Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO724G0798 Papaver somniferum HOM05D005006 ORTHO05D005903 1.5e-87 326.2 171 100.0
PSO724G1125 Papaver somniferum HOM05D005006 ORTHO05D005903 2.7e-86 322.0 171 98.8
PSO724G0350 Papaver somniferum HOM05D005006 ORTHO05D005903 1.7e-67 259.6 195 76.9
PSO729G0067 Papaver somniferum HOM05D005006 ORTHO05D005903 3.4e-60 235.3 188 72.3
CANSAT21G0143 Cannabis sativa HOM05D005006 ORTHO05D005903 1.9e-15 86.7 182 40.1
FvH4_5g04150 Fragaria vesca HOM05D005006 ORTHO05D005903 7.4e-15 84.7 174 38.5
FAN13G1208 Fragaria x ananassa HOM05D005006 ORTHO05D005903 7.4e-15 84.7 174 37.9
FAN18G0263 Fragaria x ananassa HOM05D005006 ORTHO05D005903 7.4e-15 84.7 174 37.9
Aqoxy5G04131 Aquilegia oxysepala HOM05D005006 ORTHO05D005903 9.6e-15 84.3 170 39.4
FAN18G2980 Fragaria x ananassa HOM05D005006 ORTHO05D005903 9.6e-15 84.3 174 37.9
FAN04G1712 Fragaria x ananassa HOM05D005006 ORTHO05D005903 1.5e-12 77.0 110 47.3
FAN04G3134 Fragaria x ananassa HOM05D005006 ORTHO05D005903 1.5e-12 77.0 110 47.3
RcHm_v2.0_Chr7g0195351 Rosa chinensis HOM05D005006 ORTHO05D005903 1.0e-11 74.3 178 36.5
Sp2g00420 Schrenkiella parvula HOM05D005006 ORTHO05D005903 1.7e-11 73.6 109 42.2
Carub.0002s0046 Capsella rubella HOM05D005006 ORTHO05D005903 2.9e-11 72.8 154 32.5
Thhalv10023644m.g Eutrema salsugineum HOM05D005006 ORTHO05D005903 6.5e-11 71.6 97 39.2
AL2G10550 Arabidopsis lyrata HOM05D005006 ORTHO05D005903 1.9e-10 70.1 168 32.7
Sed0010968 Sechium edule HOM05D005006 ORTHO05D005903 2.5e-10 69.7 169 36.7
Cpa.g.sc775.1 Carica papaya HOM05D005006 ORTHO05D005903 3.2e-10 69.3 152 38.2
Potri.001G093500 Populus trichocarpa HOM05D005006 ORTHO05D005903 3.2e-10 69.3 176 34.7
MELO3C005742.2 Cucumis melo HOM05D005006 ORTHO05D005903 4.2e-10 68.9 118 44.1
DCAR_027715 Daucus carota HOM05D005006 ORTHO05D005903 4.2e-10 68.9 92 50.0
Sc22g0005120 Simmondsia chinensis HOM05D005006 ORTHO05D005903 4.2e-10 68.9 85 50.6
MD14G1122100 Malus domestica HOM05D005006 ORTHO05D005903 7.1e-10 68.2 121 37.2
Nn1g01823 Nelumbo nucifera HOM05D005006 ORTHO05D005903 7.1e-10 68.2 103 49.5
Sp7g00270 Schrenkiella parvula HOM05D005006 ORTHO05D005903 7.1e-10 68.2 183 36.1
CiPaw.11G123200 Carya illinoinensis HOM05D005006 ORTHO05D005903 9.3e-10 67.8 155 41.3
Haze_08652 Corylus avellana HOM05D005006 ORTHO05D005903 9.3e-10 67.8 165 33.3
Lsat_1_v5_gn_6_11781 Lactuca sativa HOM05D005006 ORTHO05D005903 1.2e-09 67.4 105 43.8
Ca_17490_v3 Cicer arietinum L. HOM05D005006 ORTHO05D005903 1.6e-09 67.0 169 34.9
C09p17190 Brassica napus HOM05D005006 ORTHO05D005903 2.1e-09 66.6 97 40.2
BolC9t54617H Brassica oleracea HOM05D005006 ORTHO05D005903 2.1e-09 66.6 97 40.2
AT1G64340 Arabidopsis thaliana HOM05D005006 ORTHO05D005903 3.5e-09 65.9 97 40.2
BcaC04g22629 Brassica carinata HOM05D005006 ORTHO05D005903 3.5e-09 65.9 97 39.2
Haze_08651 Corylus avellana HOM05D005006 ORTHO05D005903 3.5e-09 65.9 95 43.2
TWI81G0332 Tripterygium wilfordii HOM05D005006 ORTHO05D005903 3.5e-09 65.9 153 35.3
Sed0013874 Sechium edule HOM05D005006 ORTHO05D005903 4.6e-09 65.5 97 46.4
AUR62010816 Chenopodium quinoa HOM05D005006 ORTHO05D005903 7.9e-09 64.7 162 34.6
Cc08_g15850 Coffea canephora HOM05D005006 ORTHO05D005903 7.9e-09 64.7 95 47.4
CsaV3_5G002120 Cucumis sativus L. HOM05D005006 ORTHO05D005903 1.0e-08 64.3 160 35.0
ECA233G6185 Erigeron canadensis HOM05D005006 ORTHO05D005903 1.3e-08 63.9 87 47.1
Eucgr.D01714 Eucalyptus grandis HOM05D005006 ORTHO05D005903 1.3e-08 63.9 142 35.9
Gohir.D08G132000 Gossypium hirsutum HOM05D005006 ORTHO05D005903 1.3e-08 63.9 149 31.5
Gorai.004G134900 Gossypium raimondii HOM05D005006 ORTHO05D005903 1.3e-08 63.9 149 31.5
Psat0s4474g0040 Pisum sativum HOM05D005006 ORTHO05D005903 1.3e-08 63.9 168 31.0
A09p14260 Brassica napus HOM05D005006 ORTHO05D005903 1.8e-08 63.5 86 41.9
C06p20240 Brassica napus HOM05D005006 ORTHO05D005903 1.8e-08 63.5 111 44.1
BolC6t37205H Brassica oleracea HOM05D005006 ORTHO05D005903 1.8e-08 63.5 111 44.1
BraA09t37075Z Brassica rapa HOM05D005006 ORTHO05D005903 1.8e-08 63.5 86 41.9
HanXRQChr07g0191041 Helianthus annuus HOM05D005006 ORTHO05D005903 1.8e-08 63.5 86 46.5
Cfa012825 Carpinus fangiana HOM05D005006 ORTHO05D005903 2.3e-08 63.2 165 33.9
Duzib084G0720 Durio zibethinus HOM05D005006 ORTHO05D005903 2.3e-08 63.2 153 30.1
Manes.02G011900 Manihot esculenta HOM05D005006 ORTHO05D005903 2.3e-08 63.2 165 33.9
Gohir.A08G085100 Gossypium hirsutum HOM05D005006 ORTHO05D005903 3.0e-08 62.8 149 32.2
MD06G1103200 Malus domestica HOM05D005006 ORTHO05D005903 3.0e-08 62.8 107 41.1
Nitab4.5_0007099g0020 Nicotiana tabacum HOM05D005006 ORTHO05D005903 3.0e-08 62.8 87 50.6
Psat7g027080 Pisum sativum HOM05D005006 ORTHO05D005903 3.0e-08 62.8 166 30.7
Prupe.5G116000 Prunus persica HOM05D005006 ORTHO05D005903 3.0e-08 62.8 102 43.1
Sabra01G0069400 Salix brachista HOM05D000089 ORTHO05D003403 3.0e-08 62.8 144 34.0
Solyc08g082090.1 Solanum lycopersicum HOM05D005006 ORTHO05D005903 3.0e-08 62.8 84 50.0
Sopen08g030380 Solanum pennellii HOM05D005006 ORTHO05D005903 3.0e-08 62.8 84 50.0
BraA07t29781Z Brassica rapa HOM05D005006 ORTHO05D005903 3.9e-08 62.4 93 48.4
ClCG01G001990 Citrullus lanatus HOM05D005006 ORTHO05D005903 3.9e-08 62.4 162 37.7
BcaC08g44558 Brassica carinata HOM05D005006 ORTHO05D005903 5.1e-08 62.0 93 48.4
A07p20950 Brassica napus HOM05D005006 ORTHO05D005903 5.1e-08 62.0 93 48.4
MELO3C016304.2 Cucumis melo HOM05D005006 ORTHO05D005903 5.1e-08 62.0 150 40.0
PGSC0003DMG400012296 Solanum tuberosum HOM05D005006 ORTHO05D005903 5.1e-08 62.0 85 50.6
TWI15G0537 Tripterygium wilfordii HOM05D005006 ORTHO05D005903 6.7e-08 61.6 151 34.4
Atru.chr9.2028 Acer truncatum HOM05D005006 ORTHO05D005903 8.7e-08 61.2 126 34.9
Atru.chr9.2036 Acer truncatum HOM05D005006 ORTHO05D005903 8.7e-08 61.2 126 34.9
BcaB07g31512 Brassica carinata HOM05D005006 ORTHO05D005903 8.7e-08 61.2 93 39.8
SGA_v2.0_scaffold111G31421 Striga asiatica HOM05D005006 ORTHO05D005903 8.7e-08 61.2 102 40.2
ECA240G3705 Erigeron canadensis HOM05D005006 ORTHO05D005903 1.1e-07 60.8 174 35.1
Peaxi162Scf00074g01119 Petunia axillaris HOM05D005006 ORTHO05D005903 1.1e-07 60.8 88 51.1
Atru.chr2.764 Acer truncatum HOM05D005006 ORTHO05D005903 1.5e-07 60.5 87 43.7
ClCG10G009270 Citrullus lanatus HOM05D005006 ORTHO05D005903 1.5e-07 60.5 177 35.0
Medtr8g099340 Medicago truncatula HOM05D005006 ORTHO05D005903 1.5e-07 60.5 167 31.7
Dinv37546 Davidia involucrata HOM05D005006 ORTHO05D005903 1.9e-07 60.1 113 43.4
PGR031G0908 Punica granatum HOM05D005006 ORTHO05D005903 1.9e-07 60.1 86 47.7
ClCG07G014930 Citrullus lanatus HOM05D005006 ORTHO05D005903 2.5e-07 59.7 175 34.9
Duzib068G0822 Durio zibethinus HOM05D005006 ORTHO05D005903 2.5e-07 59.7 152 32.2
Oeu061095.1 Olea europaea HOM05D005006 ORTHO05D005903 2.5e-07 59.7 104 45.2
Medtr5g009490 Medicago truncatula HOM05D005006 ORTHO05D005903 3.3e-07 59.3 176 31.8
QL02p031286 Quercus lobata HOM05D005006 ORTHO05D005903 3.3e-07 59.3 149 36.2
Phvul.002G296900 Phaseolus vulgaris HOM05D005006 ORTHO05D005903 4.3e-07 58.9 188 27.7
MSTRG.13880 Avicennia marina HOM05D005006 ORTHO05D005903 7.4e-07 58.2 84 48.8
BcaB02g07876 Brassica carinata HOM05D005006 ORTHO05D005903 7.4e-07 58.2 177 32.2
Lsat_1_v5_gn_6_85661 Lactuca sativa HOM05D005006 ORTHO05D005903 9.7e-07 57.8 78 48.7
LjContig00312_ERROPOS870357g0014674 Lotus japonicus HOM05D005006 ORTHO05D005903 9.7e-07 57.8 153 32.0
MBI07_g24340_MAGBIO Magnolia biondii HOM05D005006 ORTHO05D005903 9.7e-07 57.8 174 33.3
TAR629G3139 Trochodendron aralioides HOM05D005006 ORTHO05D005903 9.7e-07 57.8 84 48.8
Actinidia01391 Actinidia chinensis HOM05D005006 ORTHO05D005903 1.6e-06 57.0 100 44.0
AT5G41810 Arabidopsis thaliana HOM05D005006 ORTHO05D005903 1.6e-06 57.0 178 30.3
THA.LOC104809339 Tarenaya hassleriana HOM05D005006 ORTHO05D005903 1.6e-06 57.0 182 30.2
Thecc.03G294000 Theobroma cacao HOM05D005006 ORTHO05D005903 1.6e-06 57.0 154 31.2
COL.COLO4_21708 Corchorus olitorius HOM05D005006 ORTHO05D005903 2.2e-06 56.6 171 29.2
Glyma.01G224600 Glycine max HOM05D005006 ORTHO05D005903 2.2e-06 56.6 87 42.5
Glyma.11G018400 Glycine max HOM05D005006 ORTHO05D005903 2.2e-06 56.6 158 33.5
Manes.02G012001 Manihot esculenta HOM05D005006 ORTHO05D005903 2.2e-06 56.6 84 47.6
ATR0589G111 Amborella trichopoda HOM05D005006 ORTHO05D005903 2.8e-06 56.2 95 41.1
Ciclev10022492m.g Citrus clementina HOM05D005006 ORTHO05D005903 2.8e-06 56.2 124 33.9
TPR.G6668 Trifolium pratense HOM05D005006 ORTHO05D005903 2.8e-06 56.2 178 30.9
CARHR212760 Cardamine hirsuta HOM05D005006 ORTHO05D005903 3.7e-06 55.8 175 30.9
Lj4g0012980 Lotus japonicus HOM05D005006 ORTHO05D005903 6.3e-06 55.1 190 33.2
Sed0017945 Sechium edule HOM05D005006 ORTHO05D005903 6.3e-06 55.1 84 47.6
Zm00001eb382950 Zea mays HOM05D005006 ORTHO05D005903 6.3e-06 55.1 40 57.5
CsaV3_4G006460 Cucumis sativus L. HOM05D005006 ORTHO05D005903 8.2e-06 54.7 157 36.3


User provided reference genes

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