Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO724G0679 Papaver somniferum HOM05D007031 ORTHO05D008815 5.5e-86 320.9 154 100.0
PSO386G0128 Papaver somniferum HOM05D007031 ORTHO05D008815 2.3e-76 288.9 141 95.7
Dinv21635 Davidia involucrata HOM05D007031 ORTHO05D008815 5.5e-62 241.1 138 77.5
TAR636G3191 Trochodendron aralioides HOM05D007031 ORTHO05D008815 9.5e-62 240.4 139 77.0
Gohir.D08G188900 Gossypium hirsutum HOM05D007031 ORTHO05D008815 3.6e-61 238.4 135 77.8
Gorai.004G199000 Gossypium raimondii HOM05D007031 ORTHO05D008815 3.6e-61 238.4 135 77.8
Duzib205G0920 Durio zibethinus HOM05D007031 ORTHO05D008815 1.4e-60 236.5 138 76.8
Aqoxy5G01014 Aquilegia oxysepala HOM05D007031 ORTHO05D008815 2.6e-59 232.3 140 75.7
MSTRG.13772 Avicennia marina HOM05D007031 ORTHO05D008815 4.4e-59 231.5 138 75.4
Solyc08g007380.4 Solanum lycopersicum HOM05D007031 ORTHO05D008815 7.5e-59 230.7 144 72.2
Lsat_1_v5_gn_5_187960 Lactuca sativa HOM05D007031 ORTHO05D008815 9.8e-59 230.3 154 70.1
Sopen08g003330 Solanum pennellii HOM05D007031 ORTHO05D008815 9.8e-59 230.3 137 73.7
Eucgr.E00427 Eucalyptus grandis HOM05D007031 ORTHO05D008815 1.3e-58 229.9 138 73.9
Actinidia14432 Actinidia chinensis HOM05D007031 ORTHO05D008815 1.7e-58 229.6 139 76.3
Migut.E00966 Erythranthe guttata HOM05D007031 ORTHO05D008815 4.9e-58 228.0 138 71.7
Cc08_g12500 Coffea canephora HOM05D007031 ORTHO05D008815 6.3e-58 227.6 150 67.3
Migut.E01683 Erythranthe guttata HOM05D007031 ORTHO05D008815 6.3e-58 227.6 138 71.7
TWI60G0154 Tripterygium wilfordii HOM05D007031 ORTHO05D008815 6.3e-58 227.6 135 74.1
Ciclev10022693m.g Citrus clementina HOM05D007031 ORTHO05D008815 2.4e-57 225.7 135 73.3
CAN.G1227.14 Capsicum annuum HOM05D007031 ORTHO05D008815 5.4e-57 224.6 136 73.5
ECA232G3888 Erigeron canadensis HOM05D007031 ORTHO05D008815 9.2e-57 223.8 140 71.4
Potri.003G076400 Populus trichocarpa HOM05D007031 ORTHO05D008815 1.6e-56 223.0 138 71.7
Lj2A217G30 Lonicera japonica HOM05D007031 ORTHO05D008815 2.0e-56 222.6 153 68.0
CSS0040909 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 2.7e-56 222.2 138 73.2
CDE09G0628 Ceratophyllum demersum HOM05D005321 ORTHO05D006360 2.7e-56 222.2 138 70.3
MBI04_g09491_MAGBIO Magnolia biondii HOM05D007031 ORTHO05D008815 4.6e-56 221.5 194 58.8
FvH4_5g18810 Fragaria vesca HOM05D007031 ORTHO05D008815 2.3e-55 219.2 153 68.0
FAN18G3883 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.3e-55 219.2 153 68.0
Gohir.A08G170700 Gossypium hirsutum HOM05D007031 ORTHO05D008815 3.9e-55 218.4 139 72.7
DCAR_027778 Daucus carota HOM05D007031 ORTHO05D008815 5.0e-55 218.0 138 69.6
FAN08G1843 Fragaria x ananassa HOM05D007031 ORTHO05D008815 6.6e-55 217.6 153 67.3
HPP92_027426 Vanilla planifolia HOM05D007031 ORTHO05D008815 8.6e-55 217.2 135 71.1
FAN13G0327 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.1e-54 216.9 153 67.3
TPR.G25905 Trifolium pratense HOM05D007031 ORTHO05D008815 1.9e-54 216.1 155 67.1
HPP92_021039 Vanilla planifolia HOM05D007031 ORTHO05D008815 1.9e-54 216.1 135 70.4
Carub.0007s2484 Capsella rubella HOM05D007031 ORTHO05D008815 2.5e-54 215.7 141 70.2
THA.LOC104815489 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 2.5e-54 215.7 139 69.8
Lalb_Chr09g0324411 Lupinus albus HOM05D007031 ORTHO05D008815 3.3e-54 215.3 139 69.1
ATR0317G125 Amborella trichopoda HOM05D007031 ORTHO05D008815 5.6e-54 214.5 135 74.1
Lj2g0002187 Lotus japonicus HOM05D007031 ORTHO05D008815 5.6e-54 214.5 153 65.4
RcHm_v2.0_Chr7g0203161 Rosa chinensis HOM05D007031 ORTHO05D008815 9.5e-54 213.8 153 66.7
CARHR223050 Cardamine hirsuta HOM05D007031 ORTHO05D008815 1.6e-53 213.0 135 68.9
Glyma.11G032300 Glycine max HOM05D007031 ORTHO05D008815 1.6e-53 213.0 137 70.1
Psat2g177560 Pisum sativum HOM05D007031 ORTHO05D008815 2.1e-53 212.6 141 67.4
CANSAT21G0077 Cannabis sativa HOM05D007031 ORTHO05D008815 8.0e-53 210.7 136 67.6
Phvul.002G062701 Phaseolus vulgaris HOM05D007031 ORTHO05D008815 8.0e-53 210.7 139 69.8
Os04g0535400 Oryza sativa ssp. japonica HOM05D007031 ORTHO05D008815 1.4e-52 209.9 138 68.8
Thhalv10026497m.g Eutrema salsugineum HOM05D007031 ORTHO05D008815 2.3e-52 209.1 135 68.9
AT4G16566 Arabidopsis thaliana HOM05D007031 ORTHO05D008815 3.1e-52 208.8 135 68.1
BcaC09g50373 Brassica carinata HOM05D007031 ORTHO05D008815 3.1e-52 208.8 136 70.6
CiPaw.12G109600 Carya illinoinensis HOM05D007031 ORTHO05D008815 3.1e-52 208.8 153 64.1
Hma1.2p1_0316F.1_g123210 Hydrangea macrophylla HOM05D007031 ORTHO05D008815 4.0e-52 208.4 117 78.6
arahy.Tifrunner.gnm1.ann1.R85P7C Arachis hypogaea HOM05D007031 ORTHO05D008815 8.9e-52 207.2 139 66.9
Aa31LG2G12690 Aethionema arabicum HOM05D007031 ORTHO05D008815 1.5e-51 206.5 135 67.4
AL7G38260 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 1.5e-51 206.5 135 67.4
arahy.Tifrunner.gnm1.ann1.WL6NYT Arachis hypogaea HOM05D007031 ORTHO05D008815 1.5e-51 206.5 139 66.9
Cfa012711 Carpinus fangiana HOM05D007031 ORTHO05D008815 1.5e-51 206.5 153 62.7
Atru.chr9.1322 Acer truncatum HOM05D007031 ORTHO05D008815 2.0e-51 206.1 116 78.4
BcaNung00171 Brassica carinata HOM05D007031 ORTHO05D008815 3.4e-51 205.3 136 69.9
BraA01t02001Z Brassica rapa HOM05D007031 ORTHO05D008815 4.4e-51 204.9 137 70.1
BolC1t02559H Brassica oleracea HOM05D007031 ORTHO05D008815 9.8e-51 203.8 137 70.1
Peaxi162Scf00102g01143 Petunia axillaris HOM05D007031 ORTHO05D008815 1.7e-50 203.0 151 64.9
CSS0002961 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 7.0e-49 197.6 141 66.0
Sed0003740 Sechium edule HOM05D007031 ORTHO05D008815 1.3e-47 193.4 139 64.0
CsaV3_5G004200 Cucumis sativus L. HOM05D007031 ORTHO05D008815 2.3e-47 192.6 139 65.5
EL10Ac5g13074 Beta vulgaris HOM05D007031 ORTHO05D008815 6.6e-47 191.0 170 52.9
unitig_699.g19776 Utricularia gibba HOM05D007031 ORTHO05D008815 1.1e-46 190.3 118 71.2
BcaNung02861 Brassica carinata HOM05D007031 ORTHO05D008815 5.6e-46 188.0 135 68.1
SEGI_08804 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 5.6e-46 188.0 136 63.2
AL7G38210 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 2.1e-45 186.0 119 68.9
ClCG01G004020 Citrullus lanatus HOM05D007031 ORTHO05D008815 1.5e-43 179.9 166 54.2
MD04G1063700 Malus domestica HOM05D007031 ORTHO05D008815 1.7e-42 176.4 126 65.9
Manes.02G039100 Manihot esculenta HOM05D007031 ORTHO05D008815 1.1e-41 173.7 109 69.7
vmacro16391 Vaccinium macrocarpon HOM05D007031 ORTHO05D008815 5.4e-41 171.4 102 77.5
VMungo1215G1202 Vigna mungo HOM05D007031 ORTHO05D008815 2.7e-40 169.1 110 69.1
Sabra03G0047000 Salix brachista HOM05D007031 ORTHO05D008815 4.6e-40 168.3 152 56.6
AUR62042788 Chenopodium quinoa HOM05D007031 ORTHO05D008815 8.6e-39 164.1 107 67.3
QL12p012249 Quercus lobata HOM05D007031 ORTHO05D008815 8.6e-39 164.1 264 37.9
FAN14G5160 Fragaria x ananassa HOM05D007031 ORTHO05D008815 3.3e-38 162.2 140 55.7
C01p26150 Brassica napus HOM05D007031 ORTHO05D008815 5.6e-38 161.4 119 63.9
Zm00001eb427450 Zea mays HOM05D007031 ORTHO05D008815 5.6e-38 161.4 101 66.3
A01p20650 Brassica napus HOM05D007031 ORTHO05D008815 1.6e-37 159.8 119 63.9
Hund14533 Selenicereus undatus HOM05D007031 ORTHO05D008815 1.6e-37 159.8 101 70.3
BolC7t45328H Brassica oleracea HOM05D007031 ORTHO05D008815 2.1e-37 159.5 125 64.8
Sp7g15180 Schrenkiella parvula HOM05D007031 ORTHO05D008815 4.0e-36 155.2 136 55.9
Nitab4.5_0000712g0190 Nicotiana tabacum HOM05D007031 ORTHO05D008815 3.4e-35 152.1 166 47.0
Prupe.5G068700 Prunus persica HOM05D007031 ORTHO05D008815 1.7e-34 149.8 153 53.6
SMO274G0074 Selaginella moellendorffii HOM05D007031 ORTHO05D008815 3.7e-34 148.7 138 52.2
AUR62007512 Chenopodium quinoa HOM05D007031 ORTHO05D008815 3.2e-33 145.6 89 69.7
MELO3C005535.2 Cucumis melo HOM05D007031 ORTHO05D008815 4.1e-33 145.2 103 67.0
Pp3c5_26880 Physcomitrium patens HOM05D007031 ORTHO05D008815 9.2e-33 144.1 141 47.5
CSS0026472 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 2.1e-32 142.9 138 52.9
GSVIVG01001319001 Vitis vinifera HOM05D007031 ORTHO05D008815 2.1e-32 142.9 85 77.6
Oeu062969.1 Olea europaea HOM05D007031 ORTHO05D008815 4.6e-32 141.7 137 52.6
SMO134G0120 Selaginella moellendorffii HOM05D000076 ORTHO05D001279 6.0e-32 141.4 115 56.5
CiPaw.11G153700 Carya illinoinensis HOM05D007031 ORTHO05D008815 1.0e-31 140.6 101 62.4
Nn6g33971 Nelumbo nucifera HOM05D007031 ORTHO05D008815 1.9e-30 136.3 77 77.9
FAN04G1478 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.6e-29 133.3 79 73.4
SalBow6G3941 Salvia bowleyana HOM05D007031 ORTHO05D008815 2.1e-29 132.9 99 63.6
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 5.2e-28 128.3 108 56.5
BcaC06g33496 Brassica carinata HOM05D007031 ORTHO05D008815 6.8e-28 127.9 92 65.2
Sc22g0000840 Simmondsia chinensis HOM05D007031 ORTHO05D008815 6.8e-28 127.9 83 66.3
FAN02G0786 Fragaria x ananassa HOM05D007031 ORTHO05D008815 7.6e-27 124.4 117 58.1
THA.LOC104815507 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 9.9e-27 124.0 73 74.0
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 5.4e-25 118.2 110 54.5
Pp3c6_3420 Physcomitrium patens HOM05D029721 ORTHO05D008815 2.7e-24 115.9 128 46.9
MCO15G691 Micromonas commoda HOM05D007031 ORTHO05D008815 7.8e-24 114.4 149 43.0
Cre03.g169200 Chlamydomonas reinhardtii HOM05D007031 ORTHO05D008815 8.7e-23 110.9 127 42.5
Haze_07923 Corylus avellana HOM05D007031 ORTHO05D008815 9.6e-22 107.5 140 42.1
Nitab4.5_0002225g0110 Nicotiana tabacum HOM05D007031 ORTHO05D008815 8.1e-21 104.4 137 44.5
Thecc.03G252200 Theobroma cacao HOM05D007031 ORTHO05D008815 8.1e-21 104.4 74 66.2
Medtr5g012525 Medicago truncatula HOM05D007031 ORTHO05D008815 1.1e-20 104.0 68 69.1
SEGI_18261 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 2.0e-19 99.8 86 57.0
FAN05G5584 Fragaria x ananassa HOM05D007031 ORTHO05D008815 3.6e-13 79.0 59 66.1
COL.COLO4_37184 Corchorus olitorius HOM05D007031 ORTHO05D008815 4.2e-09 65.5 49 63.3
HanXRQChr17g0549671 Helianthus annuus HOM05D007031 ORTHO05D008815 1.2e-08 63.9 36 77.8
Hund14535 Selenicereus undatus HOM05D007031 ORTHO05D008815 8.7e-07 57.8 45 55.6


User provided reference genes

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