Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO724G0609 Papaver somniferum HOM05D003641 ORTHO05D004915 6.8e-204 713.8 358 100.0
PSO135G0566 Papaver somniferum HOM05D003641 ORTHO05D004915 6.8e-196 687.2 358 96.6
TAR633G0428 Trochodendron aralioides HOM05D003641 ORTHO05D004915 2.5e-145 519.2 358 71.5
Manes.08G042800 Manihot esculenta HOM05D003641 ORTHO05D004915 5.5e-145 518.1 360 70.6
TAR636G0728 Trochodendron aralioides HOM05D003641 ORTHO05D004915 2.1e-144 516.2 358 70.9
Manes.09G037400 Manihot esculenta HOM05D003641 ORTHO05D004915 4.6e-144 515.0 358 70.1
Cfa020150 Carpinus fangiana HOM05D003641 ORTHO05D004915 1.0e-143 513.8 359 71.3
Haze_20012 Corylus avellana HOM05D003641 ORTHO05D004915 2.3e-143 512.7 359 71.0
CsaV3_3G038670 Cucumis sativus L. HOM05D003641 ORTHO05D004915 2.3e-143 512.7 358 70.4
CiPaw.09G029000 Carya illinoinensis HOM05D003641 ORTHO05D004915 8.7e-143 510.8 359 69.6
FvH4_6g21990 Fragaria vesca HOM05D003641 ORTHO05D004915 2.5e-142 509.2 358 69.0
FAN14G0097 Fragaria x ananassa HOM05D003641 ORTHO05D004915 2.5e-142 509.2 358 69.0
Atru.chr8.1148 Acer truncatum HOM05D003641 ORTHO05D004915 3.3e-142 508.8 361 69.8
CiPaw.10G025600 Carya illinoinensis HOM05D003641 ORTHO05D004915 3.3e-142 508.8 358 69.8
ClCG10G017650 Citrullus lanatus HOM05D003641 ORTHO05D004915 3.3e-142 508.8 359 70.2
Solyc10g078930.2 Solanum lycopersicum HOM05D003641 ORTHO05D004915 2.2e-141 506.1 358 69.3
TWI53G2154 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 2.8e-141 505.8 358 68.2
Ciclev10012043m.g Citrus clementina HOM05D003641 ORTHO05D004915 6.3e-141 504.6 365 69.3
Duzib093G1627 Durio zibethinus HOM05D003641 ORTHO05D004915 6.3e-141 504.6 358 69.8
Sabra06G0149100 Salix brachista HOM05D003641 ORTHO05D004915 6.3e-141 504.6 358 69.8
Sopen10g029550 Solanum pennellii HOM05D003641 ORTHO05D004915 6.3e-141 504.6 358 68.4
TWI74G1529 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 6.3e-141 504.6 358 67.9
MD14G1054700 Malus domestica HOM05D003641 ORTHO05D004915 8.2e-141 504.2 358 68.7
Potri.006G194400 Populus trichocarpa HOM05D003641 ORTHO05D004915 1.1e-140 503.8 358 69.6
PGSC0003DMG400011447 Solanum tuberosum HOM05D003641 ORTHO05D004915 1.1e-140 503.8 358 69.3
MELO3C009611.2 Cucumis melo HOM05D003641 ORTHO05D004915 4.1e-140 501.9 358 69.0
Sed0007356 Sechium edule HOM05D003641 ORTHO05D004915 5.3e-140 501.5 358 69.0
MBI19_g17419_MAGBIO Magnolia biondii HOM05D003641 ORTHO05D004915 6.9e-140 501.1 358 67.3
CANSAT64G0207 Cannabis sativa HOM05D003641 ORTHO05D004915 1.5e-139 500.0 361 68.7
CAN.G960.10 Capsicum annuum HOM05D003641 ORTHO05D004915 1.5e-139 500.0 359 68.8
Aa31sc80G90 Aethionema arabicum HOM05D003641 ORTHO05D004915 2.0e-139 499.6 361 67.6
Potri.016G060100 Populus trichocarpa HOM05D003641 ORTHO05D004915 3.4e-139 498.8 361 68.7
Gorai.012G099600 Gossypium raimondii HOM05D003641 ORTHO05D004915 5.9e-139 498.0 358 68.4
Sabra16G0062900 Salix brachista HOM05D003641 ORTHO05D004915 7.6e-139 497.7 358 68.2
DCAR_017036 Daucus carota HOM05D003641 ORTHO05D004915 1.0e-138 497.3 361 67.6
Lj2A365T90 Lonicera japonica HOM05D003641 ORTHO05D004915 1.3e-138 496.9 359 67.4
Gohir.D04G089500 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.7e-138 496.5 358 68.2
Aqoxy1G00140 Aquilegia oxysepala HOM05D003641 ORTHO05D004915 2.9e-138 495.7 358 69.0
Duzib128G0491 Durio zibethinus HOM05D003641 ORTHO05D004915 2.9e-138 495.7 358 67.3
FAN02G1826 Fragaria x ananassa HOM05D003641 ORTHO05D004915 2.9e-138 495.7 358 67.3
Peaxi162Scf00258g00921 Petunia axillaris HOM05D003641 ORTHO05D004915 6.5e-138 494.6 360 67.5
AUR62011998 Chenopodium quinoa HOM05D003641 ORTHO05D004915 1.9e-137 493.0 358 67.0
FAN05G2657 Fragaria x ananassa HOM05D003641 ORTHO05D004915 5.5e-137 491.5 358 67.0
Nitab4.5_0007274g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 7.2e-137 491.1 358 67.6
FAN09G3507 Fragaria x ananassa HOM05D003641 ORTHO05D004915 1.2e-136 490.3 358 66.8
A05p37290 Brassica napus HOM05D003641 ORTHO05D004915 3.6e-136 488.8 359 67.4
Thecc.05G174300 Theobroma cacao HOM05D003641 ORTHO05D004915 3.6e-136 488.8 358 66.8
CARHR086620 Cardamine hirsuta HOM05D003641 ORTHO05D004915 4.6e-136 488.4 363 66.1
Hund24813 Selenicereus undatus HOM05D003641 ORTHO05D004915 6.1e-136 488.0 358 66.2
C05p55760 Brassica napus HOM05D003641 ORTHO05D004915 1.3e-135 486.9 359 66.9
Gohir.A04G051900 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.3e-135 486.9 358 66.5
Sc13g0002360 Simmondsia chinensis HOM05D003641 ORTHO05D004915 1.3e-135 486.9 358 65.9
BcaB06g25550 Brassica carinata HOM05D003641 ORTHO05D004915 2.3e-135 486.1 359 67.4
BraA05t22525Z Brassica rapa HOM05D003641 ORTHO05D004915 2.3e-135 486.1 361 66.5
MD12G1055300 Malus domestica HOM05D003641 ORTHO05D004915 3.9e-135 485.3 358 66.2
RcHm_v2.0_Chr3g0479291 Rosa chinensis HOM05D003641 ORTHO05D004915 3.9e-135 485.3 358 66.8
Dinv24057 Davidia involucrata HOM05D003641 ORTHO05D004915 5.1e-135 485.0 358 67.3
Sp3g10280 Schrenkiella parvula HOM05D003641 ORTHO05D004915 5.1e-135 485.0 362 66.0
COL.COLO4_29349 Corchorus olitorius HOM05D003641 ORTHO05D004915 8.7e-135 484.2 358 67.0
AT3G12050 Arabidopsis thaliana HOM05D003641 ORTHO05D004915 1.1e-134 483.8 362 64.9
Prupe.7G080100 Prunus persica HOM05D003641 ORTHO05D004915 1.1e-134 483.8 358 65.9
ECA248G0025 Erigeron canadensis HOM05D003641 ORTHO05D004915 2.5e-134 482.6 361 66.8
AL3G23660 Arabidopsis lyrata HOM05D003641 ORTHO05D004915 3.3e-134 482.3 362 64.9
Oeu063867.1 Olea europaea HOM05D003641 ORTHO05D004915 3.3e-134 482.3 358 65.6
SalBow6G5303 Salvia bowleyana HOM05D003641 ORTHO05D004915 4.3e-134 481.9 358 65.1
Thhalv10021006m.g Eutrema salsugineum HOM05D003641 ORTHO05D004915 3.7e-133 478.8 362 66.0
vmacro07894 Vaccinium macrocarpon HOM05D003641 ORTHO05D004915 4.8e-133 478.4 358 66.8
Psat3g067000 Pisum sativum HOM05D003641 ORTHO05D004915 8.2e-133 477.6 365 64.7
PGR004G2452 Punica granatum HOM05D003641 ORTHO05D004915 1.8e-132 476.5 358 64.5
HanXRQChr01g0010591 Helianthus annuus HOM05D003641 ORTHO05D004915 2.4e-132 476.1 359 65.7
Hma1.2p1_0676F.1_g201930 Hydrangea macrophylla HOM05D003641 ORTHO05D004915 5.3e-132 474.9 358 66.5
Glyma.03G146100 Glycine max HOM05D003641 ORTHO05D004915 6.9e-132 474.6 358 64.2
CSS0018208 Camellia sinensis var. sinensis HOM05D003641 ORTHO05D004915 9.1e-132 474.2 358 66.2
Lju124A24T32 Lonicera japonica HOM05D003641 ORTHO05D004915 9.1e-132 474.2 358 64.5
AUR62015343 Chenopodium quinoa HOM05D003641 ORTHO05D004915 1.2e-131 473.8 358 64.2
Ca_08533_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.5e-131 473.4 361 64.3
Ca_12045_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.5e-131 473.4 358 65.4
Cpa.g.sc85.60 Carica papaya HOM05D003641 ORTHO05D004915 2.0e-131 473.0 363 63.9
MSTRG.19915 Avicennia marina HOM05D003641 ORTHO05D004915 2.6e-131 472.6 359 64.6
THA.LOC104826776 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 2.6e-131 472.6 358 65.1
THA.LOC104809934 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 4.5e-131 471.9 358 64.8
VMungo1383G0826 Vigna mungo HOM05D003641 ORTHO05D004915 4.5e-131 471.9 358 64.2
Eucgr.A02465 Eucalyptus grandis HOM05D003641 ORTHO05D004915 5.9e-131 471.5 359 63.5
CDE05G2508 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 7.7e-131 471.1 358 63.7
SGA_v2.0_scaffold105G30499 Striga asiatica HOM05D003641 ORTHO05D004915 7.7e-131 471.1 359 64.9
QL07p024293 Quercus lobata HOM05D003641 ORTHO05D004915 1.3e-130 470.3 368 64.9
Rhsim03G0004900 Rhododendron simsii HOM05D003641 ORTHO05D004915 1.7e-130 469.9 358 65.6
Migut.J01850 Erythranthe guttata HOM05D003641 ORTHO05D004915 2.2e-130 469.5 359 64.6
SGA_v2.0_scaffold69G23056 Striga asiatica HOM05D003641 ORTHO05D004915 2.2e-130 469.5 359 64.3
Medtr7g093500 Medicago truncatula HOM05D003641 ORTHO05D004915 2.9e-130 469.2 358 64.0
Medtr0136s0060 Medicago truncatula HOM05D003641 ORTHO05D004915 1.4e-129 466.8 359 64.6
Lj5g0013930 Lotus japonicus HOM05D003641 ORTHO05D004915 1.9e-129 466.5 361 64.5
BolC5t34243H Brassica oleracea HOM05D003641 ORTHO05D004915 2.5e-129 466.1 402 59.7
Carub.0003s1139 Capsella rubella HOM05D003641 ORTHO05D004915 2.5e-129 466.1 365 63.8
CDE11G0833 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 2.5e-129 466.1 358 63.1
Lj1g0002782 Lotus japonicus HOM05D003641 ORTHO05D004915 2.5e-129 466.1 358 62.8
Glyma.19G149300 Glycine max HOM05D003641 ORTHO05D004915 3.2e-129 465.7 358 64.0
Phvul.001G143800 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 3.2e-129 465.7 362 62.4
Cc06_g15710 Coffea canephora HOM05D003641 ORTHO05D004915 4.2e-129 465.3 358 64.5
Lsat_1_v5_gn_5_164500 Lactuca sativa HOM05D003641 ORTHO05D004915 7.2e-129 464.5 352 64.8
Nitab4.5_0000105g0210 Nicotiana tabacum HOM05D003641 ORTHO05D004915 7.2e-129 464.5 352 67.0
EL10Ac3g06892 Beta vulgaris HOM05D003641 ORTHO05D004915 1.2e-128 463.8 358 63.7
TPR.G30301 Trifolium pratense HOM05D003641 ORTHO05D004915 1.2e-128 463.8 358 64.0
Phvul.007G261100 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 1.6e-128 463.4 358 62.3
Oeu006209.1 Olea europaea HOM05D003641 ORTHO05D004915 2.7e-128 462.6 367 61.9
ATR0598G178 Amborella trichopoda HOM05D003641 ORTHO05D004915 1.0e-127 460.7 358 63.1
arahy.Tifrunner.gnm1.ann1.G8NWJQ Arachis hypogaea HOM05D003641 ORTHO05D004915 1.8e-127 459.9 361 62.0
Nitab4.5_0002343g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.8e-127 459.9 359 65.7
Zm00001eb037640 Zea mays HOM05D003641 ORTHO05D004915 1.5e-126 456.8 360 62.5
arahy.Tifrunner.gnm1.ann1.86C462 Arachis hypogaea HOM05D003641 ORTHO05D004915 2.0e-126 456.4 361 61.5
Nitab4.5_0001137g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 3.3e-126 455.7 359 64.6
Ah.04g152830 Amaranthus hybridus HOM05D003641 ORTHO05D004915 4.4e-126 455.3 339 64.0
Glyma.09G109200 Glycine max HOM05D003641 ORTHO05D004915 5.7e-126 454.9 358 63.1
Lalb_Chr18g0047991 Lupinus albus HOM05D003641 ORTHO05D004915 5.7e-126 454.9 359 61.8
VMungo0720G0815 Vigna mungo HOM05D003641 ORTHO05D004915 6.3e-125 451.4 358 62.6
Zm00001eb177410 Zea mays HOM05D003641 ORTHO05D004915 1.4e-124 450.3 360 61.1
Hund19209 Selenicereus undatus HOM05D003641 ORTHO05D004915 1.8e-124 449.9 359 61.0
Glyma.02G171100 Glycine max HOM05D003641 ORTHO05D004915 2.6e-123 446.0 358 62.3
BcaC05g29294 Brassica carinata HOM05D003641 ORTHO05D004915 4.5e-123 445.3 359 62.4
HPP92_005766 Vanilla planifolia HOM05D003641 ORTHO05D004915 1.7e-122 443.4 366 59.6
unitig_899.g15167 Utricularia gibba HOM05D003641 ORTHO05D004915 1.9e-121 439.9 361 60.7
HPP92_009321 Vanilla planifolia HOM05D003641 ORTHO05D004915 2.5e-121 439.5 362 60.2
Os08g0464000 Oryza sativa ssp. japonica HOM05D003641 ORTHO05D004915 7.2e-121 438.0 360 60.0
Mapoly0109s0023 Marchantia polymorpha HOM05D003641 ORTHO05D004915 5.2e-119 431.8 358 59.8
AagrBONN_evm.TU.Sc2ySwM_344.3694 Anthoceros agrestis HOM05D003641 ORTHO05D004915 4.8e-117 425.2 358 57.8
Pp3c9_15400 Physcomitrium patens HOM05D003641 ORTHO05D004915 6.3e-117 424.9 358 58.9
Pp3c15_21400 Physcomitrium patens HOM05D003641 ORTHO05D004915 5.3e-116 421.8 358 57.5
SMO203G0054 Selaginella moellendorffii HOM05D003641 ORTHO05D004915 1.7e-114 416.8 358 55.3
unitig_746.g26803 Utricularia gibba HOM05D003641 ORTHO05D004915 3.8e-114 415.6 344 59.0
Nn7g35971 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.6e-112 410.2 294 69.7
Nn7g35972 Nelumbo nucifera HOM05D003641 ORTHO05D004915 4.7e-112 408.7 310 64.8
Psat6g123080 Pisum sativum HOM05D003641 ORTHO05D004915 4.8e-101 372.1 303 60.7
Gorai.012G099500 Gossypium raimondii HOM05D003641 ORTHO05D004915 5.2e-95 352.1 329 55.9
Actinidia22049 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.5e-94 350.5 359 53.2
GSVIVG01033476001 Vitis vinifera HOM05D003641 ORTHO05D004915 2.0e-94 350.1 360 51.9
TPR.G35793 Trifolium pratense HOM05D003641 ORTHO05D004915 4.5e-91 339.0 305 55.7
Actinidia14376 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.5e-89 334.0 331 55.3
Gohir.D04G089400 Gossypium hirsutum HOM05D003641 ORTHO05D004915 3.9e-74 282.7 213 66.7
PRCOL_00005901 Prasinoderma coloniale HOM05D003641 ORTHO05D004915 1.8e-71 273.9 358 41.3
SEGI_39925 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 8.6e-66 255.0 275 49.8
BcaC09g48210 Brassica carinata HOM05D003641 ORTHO05D004915 3.4e-62 243.0 249 56.6
Gohir.A04G052000 Gossypium hirsutum HOM05D003641 ORTHO05D004915 4.9e-61 239.2 196 64.3
MCO07G236 Micromonas commoda HOM05D003641 ORTHO05D004915 2.4e-60 236.9 356 38.5
Gohir.A04G052026 Gossypium hirsutum HOM05D003641 ORTHO05D004915 2.4e-55 220.3 157 66.9
Cre03.g199300 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D004915 4.0e-55 219.5 357 35.0
Actinidia32404 Actinidia chinensis HOM05D003641 ORTHO05D004915 3.3e-49 199.9 115 78.3
arahy.Tifrunner.gnm1.ann1.VQQW03 Arachis hypogaea HOM05D003641 ORTHO05D004915 6.2e-48 195.7 126 71.4
arahy.Tifrunner.gnm1.ann1.EPN7T6 Arachis hypogaea HOM05D003641 ORTHO05D004915 8.1e-48 195.3 145 62.1
SEGI_05882 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 2.4e-31 140.6 202 43.6
Ca_31327_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.4e-30 136.7 85 68.2
Ca_14569_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 7.6e-30 135.6 85 68.2
Ca_20435_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.7e-29 134.4 85 67.1
Ca_09720_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 4.2e-28 129.8 85 64.7
Glyma.09G095600 Glycine max HOM05D003641 ORTHO05D004915 9.3e-28 128.6 137 51.8
Hund07686 Selenicereus undatus HOM05D003641 ORTHO05D011049 6.7e-26 122.5 192 38.5
arahy.Tifrunner.gnm1.ann1.20Y790 Arachis hypogaea HOM05D003641 ORTHO05D004915 2.8e-24 117.1 106 53.8
HanXRQChr03g0083061 Helianthus annuus HOM05D003641 ORTHO05D004915 3.7e-24 116.7 139 43.9
Ca_12039_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.9e-20 104.4 58 82.8
Dinv18648 Davidia involucrata HOM05D003641 ORTHO05D004915 1.4e-18 98.2 59 74.6
Dinv26263 Davidia involucrata HOM05D003641 ORTHO05D004915 1.4e-18 98.2 59 74.6
Dinv18651 Davidia involucrata HOM05D003641 ORTHO05D004915 1.8e-18 97.8 63 71.4
MCO11G399 Micromonas commoda HOM05D003641 ORTHO05D044219 2.5e-17 94.0 149 36.9
Nn8g39306 Nelumbo nucifera HOM05D003641 ORTHO05D004915 2.5e-17 94.0 60 70.0
Hund07687 Selenicereus undatus HOM05D003641 ORTHO05D021213 9.7e-17 92.0 193 35.2
CBR_g18730 Chara braunii HOM05D003641 ORTHO05D004915 4.8e-16 89.7 55 70.9
EL10Ac8g19334 Beta vulgaris HOM05D003641 ORTHO05D027013 3.1e-15 87.0 78 51.3
arahy.Tifrunner.gnm1.ann1.XYD4PT Arachis hypogaea HOM05D003641 ORTHO05D038899 4.1e-15 86.7 76 53.9
Ca_03268_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 5.3e-15 86.3 59 66.1
Ca_20824_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 9.4e-12 75.5 37 75.7
Cre08.g358539 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D044219 3.6e-11 73.6 131 29.8
BolC1t05367H Brassica oleracea HOM05D003641 ORTHO05D038899 4.7e-11 73.2 49 65.3
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.3e-10 70.9 68 52.9
SGA_v2.0_scaffold200G41266 Striga asiatica HOM05D037212 ORTHO05D027013 6.7e-10 69.3 75 48.0
CsaV3_5G015400 Cucumis sativus L. HOM05D003641 ORTHO05D004915 1.5e-09 68.2 50 58.0
PGSC0003DMG400035352 Solanum tuberosum HOM05D003641 ORTHO05D004915 2.0e-09 67.8 82 43.9
VMungo0464G0530 Vigna mungo HOM05D003641 ORTHO05D004915 2.4e-07 60.8 64 42.2
arahy.Tifrunner.gnm1.ann1.5I9U23 Arachis hypogaea HOM05D003641 ORTHO05D085625 4.1e-07 60.1 120 39.2
Peaxi162Scf00003g04539 Petunia axillaris HOM05D000312 ORTHO05D000221 5.9e-06 56.2 49 49.0


User provided reference genes

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