Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO724G0504 Papaver somniferum HOM05D008572 ORTHO05D010686 8.0e-164 580.5 318 100.0
PSO478G1979 Papaver somniferum HOM05D008572 ORTHO05D010686 3.8e-57 226.1 137 78.8
PSO591G0238 Papaver somniferum HOM05D033912 ORTHO05D010686 1.7e-52 210.7 196 63.3
PSO675G3027 Papaver somniferum HOM05D008572 ORTHO05D010686 1.3e-49 201.1 275 46.2
PSO339G6350 Papaver somniferum HOM05D008572 ORTHO05D010686 4.0e-46 189.5 185 50.8
PSO170G0701 Papaver somniferum HOM05D008572 ORTHO05D010686 1.2e-45 188.0 277 42.6
PSO210G3523 Papaver somniferum HOM05D008572 ORTHO05D010686 2.8e-44 183.3 139 66.9
PSO017G2693 Papaver somniferum HOM05D008572 ORTHO05D010686 2.7e-42 176.8 113 74.3
PSO017G6040 Papaver somniferum HOM05D008572 ORTHO05D010686 5.5e-32 142.5 174 42.0
PSO832G3462 Papaver somniferum HOM05D008572 ORTHO05D010686 5.5e-32 142.5 173 41.6
PSO591G0469 Papaver somniferum HOM05D008572 ORTHO05D010686 1.6e-31 141.0 173 41.6
PSO170G4198 Papaver somniferum HOM05D008572 ORTHO05D010686 8.0e-31 138.7 176 42.0
PSO591G0433 Papaver somniferum HOM05D008572 ORTHO05D010686 8.0e-31 138.7 173 42.2
PSO017G6324 Papaver somniferum HOM05D008572 ORTHO05D010686 3.4e-29 133.3 195 36.9
PSO017G4571 Papaver somniferum HOM05D008572 ORTHO05D010686 7.5e-29 132.1 181 39.2
MBI15_g20157_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D010248 1.3e-28 131.3 170 37.6
PSO170G6600 Papaver somniferum HOM05D008572 ORTHO05D010686 1.7e-28 131.0 176 39.8
PSO017G6317 Papaver somniferum HOM05D008572 ORTHO05D010686 2.8e-28 130.2 191 36.6
TAR626G0102 Trochodendron aralioides HOM05D008572 ORTHO05D010686 2.8e-28 130.2 166 37.3
MBI15_g20159_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 3.7e-28 129.8 169 39.6
PSO170G1653 Papaver somniferum HOM05D008572 ORTHO05D010686 8.3e-28 128.6 181 38.1
PSO170G4253 Papaver somniferum HOM05D008572 ORTHO05D010686 1.1e-27 128.3 176 38.6
TAR625G0191 Trochodendron aralioides HOM05D008572 ORTHO05D010686 2.4e-27 127.1 154 43.5
PSO210G4535 Papaver somniferum HOM05D008572 ORTHO05D010686 7.0e-27 125.6 193 35.2
PSO017G1664 Papaver somniferum HOM05D008572 ORTHO05D010686 2.7e-26 123.6 197 35.5
PSO384G0112 Papaver somniferum HOM05D008572 ORTHO05D010686 1.7e-25 120.9 121 50.4
PSO017G2910 Papaver somniferum HOM05D008572 ORTHO05D010686 2.3e-25 120.6 202 33.7
PSO170G0735 Papaver somniferum HOM05D008572 ORTHO05D010686 1.1e-24 118.2 121 50.4
PSO357G0235 Papaver somniferum HOM05D008572 ORTHO05D010686 1.1e-24 118.2 209 31.1
MBI15_g24178_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 4.7e-23 112.8 185 35.1
Aqoxy2G01581 Aquilegia oxysepala HOM05D008572 ORTHO05D010248 2.3e-22 110.5 193 34.2
PSO832G0164 Papaver somniferum HOM05D008572 ORTHO05D010686 6.8e-22 109.0 130 44.6
MBI15_g06453_MAGBIO Magnolia biondii HOM05D007906 ORTHO05D004199 9.8e-21 105.1 169 31.4
MBI16_g35338_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 1.3e-17 94.7 187 30.5
MBI01_g06508_MAGBIO Magnolia biondii HOM05D007906 ORTHO05D010248 5.0e-17 92.8 142 34.5
MBI08_g00251_MAGBIO Magnolia biondii HOM05D008572 ORTHO05D004199 8.6e-17 92.0 139 34.5
MBI14_g08057_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 8.6e-17 92.0 153 32.0
Aqoxy3G01969 Aquilegia oxysepala HOM05D008572 ORTHO05D010248 1.9e-16 90.9 198 29.3
MBI01_g41484_MAGBIO Magnolia biondii HOM05D007906 ORTHO05D010248 3.3e-16 90.1 142 33.8
MBI13_g31587_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 5.6e-16 89.4 169 30.2
MBI12_g03766_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 1.6e-15 87.8 153 30.7
MBI09_g12045_MAGBIO Magnolia biondii HOM05D007906 ORTHO05D004199 3.6e-15 86.7 152 34.2
MBI15_g19197_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 4.7e-15 86.3 115 40.9
PSO017G4524 Papaver somniferum HOM05D033912 ORTHO05D010686 4.7e-15 86.3 112 50.0
MBI06_g45493_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 8.0e-15 85.5 207 28.5
MBI10_g08041_MAGBIO Magnolia biondii HOM05D007906 ORTHO05D004199 1.5e-13 81.3 149 28.2
MBI11_g23345_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 1.5e-13 81.3 155 30.3
PSO339G2473 Papaver somniferum HOM05D011526 ORTHO05D010686 2.0e-13 80.9 190 29.5
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 2.6e-13 80.5 183 27.9
MBI05_g39717_MAGBIO Magnolia biondii HOM05D007906 ORTHO05D004199 1.7e-12 77.8 152 30.3
Rhsim01G0136300 Rhododendron simsii HOM05D004909 ORTHO05D009316 2.2e-12 77.4 149 34.9
PSO384G3810 Papaver somniferum HOM05D033912 ORTHO05D010686 2.9e-12 77.0 104 49.0
TAR376G0951 Trochodendron aralioides HOM05D008572 ORTHO05D010686 3.7e-12 76.6 89 43.8
Rhsim01G0043800 Rhododendron simsii HOM05D007314 ORTHO05D003768 4.9e-12 76.3 172 27.9
Rhsim04G0083300 Rhododendron simsii HOM05D007314 ORTHO05D010380 4.9e-12 76.3 150 31.3
Rhsim06G0121300 Rhododendron simsii HOM05D007314 ORTHO05D010380 8.3e-12 75.5 149 32.2
PGR044G2648 Punica granatum HOM05D000876 ORTHO05D000285 1.9e-11 74.3 164 31.1
FvH4_4g15323 Fragaria vesca HOM05D008321 ORTHO05D010380 3.2e-11 73.6 190 27.4
MBI12_g17742_MAGBIO Magnolia biondii HOM05D007906 ORTHO05D010248 3.2e-11 73.6 153 29.4
MBI18_g37677_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 3.2e-11 73.6 133 30.1
PSO170G1441 Papaver somniferum HOM05D011526 ORTHO05D010686 5.4e-11 72.8 224 26.8
EL10Ac5g11862 Beta vulgaris HOM05D001385 ORTHO05D008760 7.0e-11 72.4 161 32.3
Duzib084G0418 Durio zibethinus HOM05D000539 ORTHO05D000233 7.0e-11 72.4 187 24.6
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 7.0e-11 72.4 179 27.4
PSO675G7387 Papaver somniferum HOM05D000539 ORTHO05D000233 9.2e-11 72.0 156 30.1
HanXRQChr03g0064951 Helianthus annuus HOM05D005763 ORTHO05D005970 1.2e-10 71.6 204 26.5
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.1e-10 70.9 186 27.4
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 2.1e-10 70.9 184 28.3
Os10g0195100 Oryza sativa ssp. japonica HOM05D001309 ORTHO05D000385 2.7e-10 70.5 153 31.4
PSO541G5385 Papaver somniferum HOM05D000539 ORTHO05D000233 2.7e-10 70.5 155 29.7
PSO675G3790 Papaver somniferum HOM05D009042 ORTHO05D003170 2.7e-10 70.5 171 25.7
CANSAT56G2878 Cannabis sativa HOM05D000539 ORTHO05D000233 3.5e-10 70.1 165 28.5
FAN22G1565 Fragaria x ananassa HOM05D000539 ORTHO05D000233 3.5e-10 70.1 198 27.3
FvH4_5g37213 Fragaria vesca HOM05D008321 ORTHO05D010380 4.6e-10 69.7 186 26.3
PSO170G6442 Papaver somniferum HOM05D008572 ORTHO05D010686 4.6e-10 69.7 120 34.2
PSO478G4594 Papaver somniferum HOM05D016570 ORTHO05D003170 4.6e-10 69.7 209 23.4
FAN16G0584 Fragaria x ananassa HOM05D000539 ORTHO05D000233 6.0e-10 69.3 198 26.8
FAN17G0771 Fragaria x ananassa HOM05D000539 ORTHO05D000233 6.0e-10 69.3 198 26.3
FAN24G2468 Fragaria x ananassa HOM05D000539 ORTHO05D000233 6.0e-10 69.3 198 26.8
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 7.8e-10 68.9 178 29.8
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.8e-10 68.9 174 27.6
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 7.8e-10 68.9 174 25.9
CiPaw.10G087600 Carya illinoinensis HOM05D001309 ORTHO05D000385 1.0e-09 68.6 181 30.9
RcHm_v2.0_Chr6g0273901 Rosa chinensis HOM05D005012 ORTHO05D005886 1.7e-09 67.8 165 30.9
CiPaw.16G105200 Carya illinoinensis HOM05D001309 ORTHO05D000385 2.3e-09 67.4 181 30.9
RcHm_v2.0_Chr1g0325021 Rosa chinensis HOM05D000539 ORTHO05D000233 2.3e-09 67.4 151 29.1
CANSAT25G0318 Cannabis sativa HOM05D007314 ORTHO05D010380 3.0e-09 67.0 149 31.5
CANSAT80G0158 Cannabis sativa HOM05D000539 ORTHO05D000233 3.0e-09 67.0 160 26.2
FAN08G3223 Fragaria x ananassa HOM05D009091 ORTHO05D003768 3.0e-09 67.0 188 25.0
CiPaw.16G058400 Carya illinoinensis HOM05D001309 ORTHO05D000385 3.9e-09 66.6 181 30.9
FAN17G3107 Fragaria x ananassa HOM05D000539 ORTHO05D000233 3.9e-09 66.6 198 26.3
FAN25G0088 Fragaria x ananassa HOM05D000539 ORTHO05D000233 3.9e-09 66.6 198 26.3
Hund06374 Selenicereus undatus HOM05D001385 ORTHO05D004434 5.1e-09 66.2 157 29.9
CiPaw.09G181600 Carya illinoinensis HOM05D001309 ORTHO05D000385 8.6e-09 65.5 181 30.9
AUR62042851 Chenopodium quinoa HOM05D001385 ORTHO05D008760 8.6e-09 65.5 174 29.3
FAN09G2875 Fragaria x ananassa HOM05D000539 ORTHO05D000233 8.6e-09 65.5 171 24.0
RcHm_v2.0_Chr1g0318231 Rosa chinensis HOM05D000539 ORTHO05D000233 8.6e-09 65.5 181 26.0
FvH4_4g10363 Fragaria vesca HOM05D008321 ORTHO05D003768 1.1e-08 65.1 171 29.2
MBI07_g28642_MAGBIO Magnolia biondii HOM05D009042 ORTHO05D003170 1.1e-08 65.1 101 31.7
MBI16_g26158_MAGBIO Magnolia biondii HOM05D007906 ORTHO05D010248 1.5e-08 64.7 118 29.7
Rhsim03G0123400 Rhododendron simsii HOM05D007314 ORTHO05D010380 1.9e-08 64.3 156 30.1
AUR62026896 Chenopodium quinoa HOM05D007123 ORTHO05D000233 2.5e-08 63.9 147 27.9
FvH4_6g20173 Fragaria vesca HOM05D008321 ORTHO05D010380 2.5e-08 63.9 179 25.1
Rhsim06G0190000 Rhododendron simsii HOM05D001309 ORTHO05D000385 2.5e-08 63.9 158 28.5
MBI18_g39897_MAGBIO Magnolia biondii HOM05D007906 ORTHO05D004199 3.3e-08 63.5 115 31.3
PSO832G4314 Papaver somniferum HOM05D008526 ORTHO05D010380 4.3e-08 63.2 160 26.9
AUR62020782 Chenopodium quinoa HOM05D004615 ORTHO05D000385 7.3e-08 62.4 172 27.3
PSO170G4583 Papaver somniferum HOM05D016570 ORTHO05D003170 7.3e-08 62.4 164 25.6
HanXRQChr03g0084621 Helianthus annuus HOM05D008488 ORTHO05D000385 9.5e-08 62.0 151 27.2
PSO339G1382 Papaver somniferum HOM05D008526 ORTHO05D010380 9.5e-08 62.0 156 30.8
PSO478G2167 Papaver somniferum HOM05D008526 ORTHO05D010380 9.5e-08 62.0 156 30.8
Sc08g0005540 Simmondsia chinensis HOM05D004615 ORTHO05D000385 9.5e-08 62.0 148 27.0
MBI19_g33997_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.6e-07 61.2 151 27.8
PSO386G0208 Papaver somniferum HOM05D008526 ORTHO05D010380 1.6e-07 61.2 89 40.4
PSO832G3699 Papaver somniferum HOM05D008526 ORTHO05D010380 1.6e-07 61.2 89 40.4
RcHm_v2.0_Chr2g0112301 Rosa chinensis HOM05D000539 ORTHO05D000233 2.1e-07 60.8 148 26.4
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 2.1e-07 60.8 178 26.4
AUR62040393 Chenopodium quinoa HOM05D007123 ORTHO05D000233 2.8e-07 60.5 136 27.9
Os02g0129000 Oryza sativa ssp. japonica HOM05D008576 ORTHO05D000385 2.8e-07 60.5 186 30.1
PSO801G0695 Papaver somniferum HOM05D008526 ORTHO05D010380 2.8e-07 60.5 89 40.4
PGR044G2317 Punica granatum HOM05D001309 ORTHO05D000385 2.8e-07 60.5 154 27.9
TAR362G0068 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.8e-07 60.5 168 26.8
GSVIVG01000866001 Vitis vinifera HOM05D000539 ORTHO05D000233 2.8e-07 60.5 163 23.9
ECA248G3122 Erigeron canadensis HOM05D000107 ORTHO05D000062 3.6e-07 60.1 128 28.1
FvH4_2g07142 Fragaria vesca HOM05D008321 ORTHO05D003768 3.6e-07 60.1 124 29.8
Os08g0367300 Oryza sativa ssp. japonica HOM05D008576 ORTHO05D000385 3.6e-07 60.1 186 30.1
AUR62042300 Chenopodium quinoa HOM05D007123 ORTHO05D000233 4.7e-07 59.7 128 28.9
FAN28G1622 Fragaria x ananassa HOM05D000539 ORTHO05D000233 4.7e-07 59.7 125 28.0
Nn3g20149 Nelumbo nucifera HOM05D001309 ORTHO05D000385 4.7e-07 59.7 81 33.3
Sed0004787 Sechium edule HOM05D000539 ORTHO05D000233 4.7e-07 59.7 184 26.1
AUR62038589 Chenopodium quinoa HOM05D000107 ORTHO05D000233 8.1e-07 58.9 147 28.6
CsaV3_4G008540 Cucumis sativus L. HOM05D000539 ORTHO05D000233 8.1e-07 58.9 176 26.7
FAN18G4094 Fragaria x ananassa HOM05D008321 ORTHO05D003768 8.1e-07 58.9 141 27.0
MBI17_g42351_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.1e-07 58.9 153 28.1
Os07g0212400 Oryza sativa ssp. japonica HOM05D008576 ORTHO05D000385 1.1e-06 58.5 186 29.6
PSO478G4591 Papaver somniferum HOM05D008526 ORTHO05D010380 1.1e-06 58.5 167 27.5
RhsimUnG0218400 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-06 58.5 126 25.4
Sed0022033 Sechium edule HOM05D000539 ORTHO05D000233 1.1e-06 58.5 148 27.7
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 1.4e-06 58.2 175 24.6
PSO724G1104 Papaver somniferum HOM05D008526 ORTHO05D010380 1.4e-06 58.2 145 30.3
PSO675G7499 Papaver somniferum HOM05D008526 ORTHO05D010380 1.8e-06 57.8 162 27.8
PSO782G0255 Papaver somniferum HOM05D008526 ORTHO05D010380 1.8e-06 57.8 125 29.6
PSO801G0034 Papaver somniferum HOM05D008526 ORTHO05D010380 1.8e-06 57.8 151 28.5
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 2.3e-06 57.4 158 28.5
FvH4_6g17382 Fragaria vesca HOM05D008321 ORTHO05D003768 2.3e-06 57.4 163 26.4
Ah.02g123480 Amaranthus hybridus HOM05D001385 ORTHO05D008760 3.1e-06 57.0 165 24.8
FvH4_1g20221 Fragaria vesca HOM05D000539 ORTHO05D000233 3.1e-06 57.0 148 25.7
Gohir.D10G156350 Gossypium hirsutum HOM05D001309 ORTHO05D000385 3.1e-06 57.0 149 26.8
MBI02_g11374_MAGBIO Magnolia biondii HOM05D007906 ORTHO05D004199 3.1e-06 57.0 80 36.2
PSO832G3122 Papaver somniferum HOM05D008526 ORTHO05D010380 3.1e-06 57.0 156 28.8
BolC8t50055H Brassica oleracea HOM05D008309 ORTHO05D010308 4.0e-06 56.6 146 26.7
ClCG07G007690 Citrullus lanatus HOM05D000107 ORTHO05D000062 4.0e-06 56.6 155 30.3
FvH4_4g09832 Fragaria vesca HOM05D005012 ORTHO05D005886 4.0e-06 56.6 182 28.6
MBI12_g14795_MAGBIO Magnolia biondii HOM05D003464 ORTHO05D003170 5.2e-06 56.2 198 25.8
Nn3g21266 Nelumbo nucifera HOM05D001309 ORTHO05D000385 5.2e-06 56.2 86 36.0
CANSAT54G2907 Cannabis sativa HOM05D000539 ORTHO05D000233 6.8e-06 55.8 166 25.3
CANSAT80G2462 Cannabis sativa HOM05D000539 ORTHO05D000233 6.8e-06 55.8 160 26.2
MBI13_g01841_MAGBIO Magnolia biondii HOM05D007906 ORTHO05D010248 6.8e-06 55.8 107 31.8
FAN23G1195 Fragaria x ananassa HOM05D000723 ORTHO05D001760 8.9e-06 55.5 148 25.0


User provided reference genes

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