Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO724G0454 Papaver somniferum HOM05D003722 ORTHO05D004589 0.0e+00 1445.3 1013 100.0
PSO135G0299 Papaver somniferum HOM05D003722 ORTHO05D004589 0.0e+00 1345.9 1015 94.1
Nn6g35614 Nelumbo nucifera HOM05D003722 ORTHO05D004589 2.2e-223 780.0 892 74.7
TAR624G1180 Trochodendron aralioides HOM05D003722 ORTHO05D004589 2.9e-223 779.6 1039 63.8
Potri.018G048700 Populus trichocarpa HOM05D003722 ORTHO05D004589 3.2e-222 776.2 914 67.1
GSVIVG01035469001 Vitis vinifera HOM05D003722 ORTHO05D004589 4.1e-222 775.8 904 67.0
Aqoxy7G04082 Aquilegia oxysepala HOM05D003722 ORTHO05D004589 2.3e-220 770.0 892 70.7
Prupe.1G404200 Prunus persica HOM05D003722 ORTHO05D004589 5.2e-217 758.8 894 66.6
Sabra18G0046400 Salix brachista HOM05D003722 ORTHO05D004589 5.8e-216 755.4 916 65.4
TAR636G3697 Trochodendron aralioides HOM05D003722 ORTHO05D004589 1.7e-215 753.8 903 64.0
MD15G1049900 Malus domestica HOM05D003722 ORTHO05D004589 3.7e-215 752.7 887 69.0
Potri.006G220900 Populus trichocarpa HOM05D003722 ORTHO05D004589 8.3e-215 751.5 891 70.6
Manes.16G085600 Manihot esculenta HOM05D003722 ORTHO05D004589 4.1e-214 749.2 891 69.8
TAR626G0824 Trochodendron aralioides HOM05D003722 ORTHO05D004589 3.0e-212 743.0 896 71.3
TAR626G0360 Trochodendron aralioides HOM05D003722 ORTHO05D004589 6.6e-212 741.9 896 71.2
Dinv02138 Davidia involucrata HOM05D003722 ORTHO05D004589 4.3e-211 739.2 972 61.2
MBI19_g11832_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 1.1e-209 734.6 898 70.6
Nn8g38669 Nelumbo nucifera HOM05D003722 ORTHO05D004589 4.0e-209 732.6 1053 63.8
Nitab4.5_0000446g0200 Nicotiana tabacum HOM05D003722 ORTHO05D004589 8.3e-207 724.9 902 63.2
Hma1.2p1_0836F.1_g225970 Hydrangea macrophylla HOM05D003722 ORTHO05D004589 1.1e-206 724.5 899 70.1
MD08G1071300 Malus domestica HOM05D003722 ORTHO05D004589 1.4e-206 724.2 962 65.4
CsaV3_4G036040 Cucumis sativus L. HOM05D003722 ORTHO05D004589 1.9e-206 723.8 890 69.3
Manes.03G053433 Manihot esculenta HOM05D003722 ORTHO05D004589 5.4e-206 722.2 1033 62.9
Sc23g0004200 Simmondsia chinensis HOM05D003722 ORTHO05D004589 2.7e-205 719.9 906 68.0
QL02p017002 Quercus lobata HOM05D003722 ORTHO05D004589 3.5e-205 719.5 907 68.4
Medtr1g015450 Medicago truncatula HOM05D003722 ORTHO05D004589 4.6e-205 719.2 898 68.5
RcHm_v2.0_Chr6g0311801 Rosa chinensis HOM05D003722 ORTHO05D004589 1.3e-204 717.6 894 62.5
Sabra06G0170700 Salix brachista HOM05D003722 ORTHO05D004589 5.1e-204 715.7 978 62.1
CSS0013734 Camellia sinensis var. sinensis HOM05D003722 ORTHO05D004589 6.6e-204 715.3 903 68.4
DCAR_001223 Daucus carota HOM05D003722 ORTHO05D004589 6.6e-204 715.3 888 70.0
TWI32G0253 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 6.6e-204 715.3 888 67.5
Oeu036060.1 Olea europaea HOM05D003722 ORTHO05D004589 8.6e-204 714.9 831 69.4
FAN27G2597 Fragaria x ananassa HOM05D003722 ORTHO05D004589 1.1e-203 714.5 901 58.5
ClCG05G015740 Citrullus lanatus HOM05D003722 ORTHO05D004589 1.9e-203 713.8 912 68.9
ATR0598G202 Amborella trichopoda HOM05D003722 ORTHO05D004589 2.1e-202 710.3 874 69.6
Dinv41842 Davidia involucrata HOM05D003722 ORTHO05D004589 2.8e-202 709.9 936 66.8
Glyma.17G225800 Glycine max HOM05D003722 ORTHO05D004589 4.7e-202 709.1 837 73.8
Haze_18293 Corylus avellana HOM05D003722 ORTHO05D004589 1.1e-201 708.0 911 66.4
Gohir.D07G019500 Gossypium hirsutum HOM05D003722 ORTHO05D004589 4.0e-201 706.1 901 68.3
FvH4_2g30970 Fragaria vesca HOM05D003722 ORTHO05D004589 5.2e-201 705.7 900 67.0
FAN24G1820 Fragaria x ananassa HOM05D003722 ORTHO05D004589 5.2e-201 705.7 890 67.6
Gohir.A07G019700 Gossypium hirsutum HOM05D003722 ORTHO05D004589 8.9e-201 704.9 903 67.8
Ca_13110_v3 Cicer arietinum L. HOM05D003722 ORTHO05D004589 4.4e-200 702.6 893 69.5
Lj5g0007526 Lotus japonicus HOM05D003722 ORTHO05D004589 7.6e-200 701.8 880 70.5
HanXRQChr09g0261801 Helianthus annuus HOM05D003722 ORTHO05D004589 9.9e-200 701.4 893 58.9
Migut.E01781 Erythranthe guttata HOM05D003722 ORTHO05D004589 1.7e-199 700.7 883 67.3
Phvul.009G081900 Phaseolus vulgaris HOM05D003722 ORTHO05D004589 2.9e-199 699.9 857 69.9
Thecc.09G063300 Theobroma cacao HOM05D003722 ORTHO05D004589 3.7e-199 699.5 875 69.9
TPR.G38933 Trifolium pratense HOM05D003722 ORTHO05D004589 4.9e-199 699.1 850 69.6
Glyma.14G098900 Glycine max HOM05D003722 ORTHO05D004589 6.4e-199 698.7 888 70.3
COL.COLO4_21138 Corchorus olitorius HOM05D003722 ORTHO05D004589 2.4e-198 696.8 877 69.0
Lalb_Chr22g0356231 Lupinus albus HOM05D003722 ORTHO05D004589 3.2e-198 696.4 873 71.1
MSTRG.25985 Avicennia marina HOM05D003722 ORTHO05D004589 4.1e-198 696.0 836 72.0
DCAR_004379 Daucus carota HOM05D003722 ORTHO05D004589 4.1e-198 696.0 896 66.3
Lsat_1_v5_gn_8_70661 Lactuca sativa HOM05D003722 ORTHO05D004589 7.1e-198 695.3 899 63.3
VMungo0647G1341 Vigna mungo HOM05D003722 ORTHO05D004589 7.1e-198 695.3 953 65.1
Eucgr.C03158 Eucalyptus grandis HOM05D003722 ORTHO05D004589 3.5e-197 693.0 901 68.0
PGR044G0665 Punica granatum HOM05D003722 ORTHO05D004589 7.8e-197 691.8 921 67.4
PGSC0003DMG400018806 Solanum tuberosum HOM05D003722 ORTHO05D004589 1.0e-196 691.4 880 65.2
Peaxi162Scf00486g01029 Petunia axillaris HOM05D003722 ORTHO05D004589 2.3e-196 690.3 879 64.2
Gorai.001G020200 Gossypium raimondii HOM05D003722 ORTHO05D004589 3.9e-196 689.5 901 67.3
Migut.A00079 Erythranthe guttata HOM05D003722 ORTHO05D004589 8.6e-196 688.3 838 71.8
Solyc08g061820.3 Solanum lycopersicum HOM05D003722 ORTHO05D004589 8.6e-196 688.3 831 65.5
Sopen08g017250 Solanum pennellii HOM05D003722 ORTHO05D004589 8.6e-196 688.3 879 63.0
Ciclev10007327m.g Citrus clementina HOM05D003722 ORTHO05D004589 7.3e-195 685.3 952 64.4
arahy.Tifrunner.gnm1.ann1.JX1TK4 Arachis hypogaea HOM05D003722 ORTHO05D004589 9.6e-195 684.9 890 68.0
FAN20G0071 Fragaria x ananassa HOM05D003722 ORTHO05D004589 1.4e-193 681.0 890 66.4
Glyma.06G055800 Glycine max HOM05D003722 ORTHO05D004589 1.4e-193 681.0 900 65.0
Sed0027838 Sechium edule HOM05D003722 ORTHO05D004589 1.8e-193 680.6 855 70.4
Duzib187G0791 Durio zibethinus HOM05D003722 ORTHO05D004589 6.8e-193 678.7 887 68.2
Nitab4.5_0002831g0060 Nicotiana tabacum HOM05D003722 ORTHO05D004589 1.2e-192 677.9 905 62.5
Rhsim03G0063100 Rhododendron simsii HOM05D003722 ORTHO05D004589 1.2e-192 677.9 909 65.0
CiPaw.15G091900 Carya illinoinensis HOM05D003722 ORTHO05D004589 5.8e-192 675.6 908 61.2
Phvul.001G038700 Phaseolus vulgaris HOM05D003722 ORTHO05D004589 1.4e-190 671.0 813 72.1
TWI34G0168 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 1.4e-190 671.0 890 66.3
Actinidia27552 Actinidia chinensis HOM05D003722 ORTHO05D004589 1.9e-190 670.6 963 62.5
CANSAT25G1471 Cannabis sativa HOM05D003722 ORTHO05D004589 1.9e-190 670.6 887 66.3
EL10Ac2g03782 Beta vulgaris HOM05D003722 ORTHO05D004589 2.4e-190 670.2 906 61.1
HanXRQChr03g0065591 Helianthus annuus HOM05D003722 ORTHO05D004589 9.3e-190 668.3 908 66.2
VMungo1309G1038 Vigna mungo HOM05D003722 ORTHO05D004589 3.0e-188 663.3 880 67.6
CSS0048906 Camellia sinensis var. sinensis HOM05D003722 ORTHO05D004589 2.5e-187 660.2 817 69.6
vmacro07490 Vaccinium macrocarpon HOM05D003722 ORTHO05D004589 5.6e-187 659.1 803 67.2
ECA236G0039 Erigeron canadensis HOM05D003722 ORTHO05D004589 7.3e-187 658.7 905 64.1
SGA_v2.0_scaffold163G37999 Striga asiatica HOM05D003722 ORTHO05D004589 3.6e-186 656.4 834 69.4
arahy.Tifrunner.gnm1.ann1.G8USHK Arachis hypogaea HOM05D003722 ORTHO05D004589 6.2e-186 655.6 816 71.0
Sp7g30950 Schrenkiella parvula HOM05D003722 ORTHO05D004589 8.1e-186 655.2 884 66.5
Carub.0007s0725 Capsella rubella HOM05D003722 ORTHO05D004589 9.0e-185 651.7 903 65.4
Lj7A221G29 Lonicera japonica HOM05D003722 ORTHO05D004589 1.5e-184 651.0 831 60.4
Lalb_Chr08g0244821 Lupinus albus HOM05D003722 ORTHO05D004589 4.4e-184 649.4 913 62.2
Glyma.04G055700 Glycine max HOM05D003722 ORTHO05D004589 5.8e-184 649.0 902 63.7
CAN.G881.1 Capsicum annuum HOM05D003722 ORTHO05D004589 7.6e-184 648.7 848 63.7
BcaNung02160 Brassica carinata HOM05D003722 ORTHO05D004589 6.4e-183 645.6 897 65.4
Atru.chr7.1848 Acer truncatum HOM05D003722 ORTHO05D004589 1.1e-182 644.8 766 71.0
Sed0000287 Sechium edule HOM05D003722 ORTHO05D004589 1.4e-182 644.4 807 67.0
Lalb_Chr23g0267971 Lupinus albus HOM05D003722 ORTHO05D004589 4.2e-182 642.9 887 58.6
THA.LOC104803705 Tarenaya hassleriana HOM05D003722 ORTHO05D004589 9.3e-182 641.7 903 62.1
BraA03t15228Z Brassica rapa HOM05D003722 ORTHO05D004589 2.1e-181 640.6 884 64.3
AUR62009080 Chenopodium quinoa HOM05D003722 ORTHO05D004589 2.1e-181 640.6 916 59.6
SalBow4G2891 Salvia bowleyana HOM05D003722 ORTHO05D004589 4.6e-181 639.4 873 65.3
BolC7t46400H Brassica oleracea HOM05D003722 ORTHO05D004589 1.0e-180 638.3 893 65.4
SGA_v2.0_scaffold64G21877 Striga asiatica HOM05D003722 ORTHO05D004589 1.0e-180 638.3 903 64.8
arahy.Tifrunner.gnm1.ann1.V7LPDI Arachis hypogaea HOM05D003722 ORTHO05D004589 1.3e-180 637.9 865 67.3
AT4G33210 Arabidopsis thaliana HOM05D003722 ORTHO05D004589 2.3e-180 637.1 883 63.6
AUR62020586 Chenopodium quinoa HOM05D003722 ORTHO05D004589 3.3e-179 633.3 885 63.3
HanXRQChr05g0135941 Helianthus annuus HOM05D003722 ORTHO05D004589 3.3e-179 633.3 891 58.9
Duzib168G1968 Durio zibethinus HOM05D003722 ORTHO05D004589 8.1e-178 628.6 880 60.5
Aa31sc290G30 Aethionema arabicum HOM05D003722 ORTHO05D004589 1.4e-177 627.9 890 64.9
BcaC09g52132 Brassica carinata HOM05D003722 ORTHO05D004589 7.6e-176 622.1 884 64.8
arahy.Tifrunner.gnm1.ann1.V9GZ7C Arachis hypogaea HOM05D003722 ORTHO05D004589 9.9e-176 621.7 862 68.4
A01p04970 Brassica napus HOM05D003722 ORTHO05D004589 1.7e-175 620.9 887 65.3
BraA01t00479Z Brassica rapa HOM05D003722 ORTHO05D004589 1.7e-175 620.9 885 65.1
C03p86790 Brassica napus HOM05D003722 ORTHO05D004589 4.9e-175 619.4 798 64.8
AL7G18350 Arabidopsis lyrata HOM05D003722 ORTHO05D004589 6.4e-175 619.0 903 63.9
BraA08t33724Z Brassica rapa HOM05D003722 ORTHO05D004589 1.1e-174 618.2 799 65.3
BolC1t00522H Brassica oleracea HOM05D003722 ORTHO05D004589 1.4e-174 617.8 894 64.5
C01p05420 Brassica napus HOM05D003722 ORTHO05D004589 1.9e-174 617.5 883 65.3
Gohir.D06G083100 Gossypium hirsutum HOM05D003722 ORTHO05D004589 4.2e-174 616.3 865 65.8
CARHR241240 Cardamine hirsuta HOM05D003722 ORTHO05D004589 7.1e-174 615.5 886 64.0
MELO3C016912.2 Cucumis melo HOM05D003722 ORTHO05D004589 9.3e-174 615.1 856 56.5
SGA_v2.0_scaffold169G38713 Striga asiatica HOM05D003722 ORTHO05D004589 4.6e-173 612.8 907 62.0
Thhalv10024312m.g Eutrema salsugineum HOM05D003722 ORTHO05D004589 6.0e-173 612.5 901 63.5
SEGI_30451 Sequoiadendron giganteum HOM05D003722 ORTHO05D004589 1.1e-171 608.2 896 62.8
BcaC01g01002 Brassica carinata HOM05D003722 ORTHO05D004589 4.3e-171 606.3 798 63.7
BolC3t20973H Brassica oleracea HOM05D003722 ORTHO05D004589 4.3e-171 606.3 798 63.7
BcaB03g12811 Brassica carinata HOM05D003722 ORTHO05D004589 4.5e-168 596.3 802 64.1
BolC3t20974H Brassica oleracea HOM05D003722 ORTHO05D004589 4.2e-166 589.7 891 59.8
A08p17750 Brassica napus HOM05D003722 ORTHO05D004589 1.3e-164 584.7 889 59.4
BraA08t33725Z Brassica rapa HOM05D003722 ORTHO05D004589 9.6e-163 578.6 889 59.5
HPP92_006154 Vanilla planifolia HOM05D003722 ORTHO05D004589 1.3e-162 578.2 876 61.5
A08p17740 Brassica napus HOM05D003722 ORTHO05D004589 1.5e-160 571.2 798 63.4
Medtr1g015480 Medicago truncatula HOM05D003722 ORTHO05D004589 1.5e-160 571.2 787 63.8
unitig_748.g8237 Utricularia gibba HOM05D003722 ORTHO05D004589 2.9e-159 567.0 874 64.0
C03p86800 Brassica napus HOM05D003722 ORTHO05D004589 1.1e-158 565.1 891 58.7
SEGI_01273 Sequoiadendron giganteum HOM05D003722 ORTHO05D004589 1.4e-158 564.7 816 65.6
Gorai.010G096600 Gossypium raimondii HOM05D003722 ORTHO05D004589 4.6e-157 559.7 818 58.2
Hund19422 Selenicereus undatus HOM05D003722 ORTHO05D004589 1.5e-155 554.7 842 55.0
CiPaw.16G068500 Carya illinoinensis HOM05D003722 ORTHO05D004589 3.7e-154 550.1 734 69.1
TWI39G1239 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 1.4e-153 548.1 743 64.1
Psat6g022880 Pisum sativum HOM05D003722 ORTHO05D004589 4.1e-153 546.6 884 55.4
Cpa.g.sc126.25 Carica papaya HOM05D003722 ORTHO05D004589 2.4e-145 520.8 683 73.2
CDE07G1686 Ceratophyllum demersum HOM05D003722 ORTHO05D004589 2.0e-144 517.7 748 63.1
Gohir.A06G081600 Gossypium hirsutum HOM05D003722 ORTHO05D004589 7.4e-139 499.2 683 65.0
Pp3c5_23900 Physcomitrium patens HOM05D003722 ORTHO05D004589 1.3e-138 498.4 925 51.7
unitig_4.g30332 Utricularia gibba HOM05D003722 ORTHO05D004589 2.8e-138 497.3 790 49.6
Mapoly0202s0013 Marchantia polymorpha HOM05D003722 ORTHO05D004589 6.3e-138 496.1 910 52.9
Pp3c12_17410 Physcomitrium patens HOM05D003722 ORTHO05D004589 3.3e-131 473.8 861 48.1
Pp3c4_12360 Physcomitrium patens HOM05D003722 ORTHO05D004589 3.1e-129 467.2 849 58.5
SMO238G0031 Selaginella moellendorffii HOM05D003722 ORTHO05D004589 4.1e-129 466.8 814 54.2
MBI13_g31962_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 7.2e-126 456.1 705 60.3
Actinidia25690 Actinidia chinensis HOM05D003722 ORTHO05D004589 4.4e-123 446.8 654 72.6
Pp3c6_6070 Physcomitrium patens HOM05D003722 ORTHO05D004589 1.8e-121 441.4 996 46.5
CBR_g11995 Chara braunii HOM05D003722 ORTHO05D004589 2.1e-109 401.4 944 49.6
SalBow1G2799 Salvia bowleyana HOM05D003722 ORTHO05D004589 1.6e-101 375.2 653 69.8
Zm00001eb048660 Zea mays HOM05D003722 ORTHO05D004589 5.2e-100 370.2 455 54.7
Os10g0396400 Oryza sativa ssp. japonica HOM05D003722 ORTHO05D004589 1.3e-98 365.5 649 59.0
MBI13_g13882_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 2.9e-98 364.4 425 60.9
Oeu022303.1 Olea europaea HOM05D003722 ORTHO05D004589 3.7e-98 364.0 300 64.0
Sc09g0010110 Simmondsia chinensis HOM05D003722 ORTHO05D004589 3.0e-95 354.4 742 50.4
AagrBONN_evm.TU.Sc2ySwM_117.2463 Anthoceros agrestis HOM05D003722 ORTHO05D004589 9.8e-91 339.3 595 64.2
SHI18847 Sapria himalayana HOM05D000105 ORTHO05D000023 7.1e-89 333.2 427 54.8
Cc08_g01170 Coffea canephora HOM05D003722 ORTHO05D004589 2.1e-85 321.6 516 56.8
Zm00001eb223490 Zea mays HOM05D003722 ORTHO05D004589 1.4e-84 318.9 505 47.3
Cc08_g01160 Coffea canephora HOM05D003722 ORTHO05D004589 4.6e-64 250.8 269 62.1
Oeu028128.1 Olea europaea HOM05D003722 ORTHO05D004589 2.8e-61 241.5 311 73.0
Psat3g079480 Pisum sativum HOM05D003722 ORTHO05D004589 9.0e-60 236.5 210 61.4
Ah.11g044300 Amaranthus hybridus HOM05D003722 ORTHO05D004589 1.0e-50 206.5 223 50.2
Actinidia25691 Actinidia chinensis HOM05D003722 ORTHO05D004589 5.1e-39 167.5 269 39.0
Gohir.A06G081780 Gossypium hirsutum HOM05D003722 ORTHO05D004589 2.7e-32 145.2 174 49.4
VMungo0720G2633 Vigna mungo HOM05D003722 ORTHO05D004589 5.3e-28 131.0 88 75.0
Psat5g213240 Pisum sativum HOM05D003722 ORTHO05D004589 5.9e-27 127.5 87 71.3
VMungo0251G0605 Vigna mungo HOM05D003722 ORTHO05D001926 2.9e-26 125.2 120 55.8
Cpa.g.sc126.26 Carica papaya HOM05D003722 ORTHO05D004589 4.2e-25 121.3 126 51.6
ECA236G4568 Erigeron canadensis HOM05D000007 ORTHO05D000039 5.9e-19 100.9 66 77.3
SalBow1G8614 Salvia bowleyana HOM05D003722 ORTHO05D050768 2.1e-16 92.4 239 74.9
Mapoly0101s0054 Marchantia polymorpha HOM05D003722 ORTHO05D004589 1.2e-11 76.6 56 62.5
Psat5g114640 Pisum sativum HOM05D003722 ORTHO05D004589 2.5e-09 68.9 195 31.3


User provided reference genes

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