Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO724G0329 Papaver somniferum HOM05D001555 ORTHO05D026749 1.6e-143 513.1 326 100.0
PSO135G0648 Papaver somniferum HOM05D001555 ORTHO05D026749 1.7e-116 423.3 329 86.9
Aqoxy7G04171 Aquilegia oxysepala HOM05D001555 ORTHO05D026749 4.2e-43 179.5 291 45.4
MBI13_g01686_MAGBIO Magnolia biondii HOM05D001555 ORTHO05D026749 1.4e-41 174.5 293 46.1
SEGI_19691 Sequoiadendron giganteum HOM05D001555 ORTHO05D001616 4.4e-16 89.7 300 33.3
Peaxi162Scf00020g00138 Petunia axillaris HOM05D001555 ORTHO05D001616 3.8e-12 76.6 292 28.1
unitig_60.g25623 Utricularia gibba HOM05D001555 ORTHO05D001616 7.2e-11 72.4 295 31.5
Peaxi162Scf00585g00033 Petunia axillaris HOM05D001555 ORTHO05D001616 9.4e-11 72.0 285 30.2
Prupe.2G176400 Prunus persica HOM05D001555 ORTHO05D001616 2.1e-10 70.9 308 28.9
MSTRG.17296 Avicennia marina HOM05D001555 ORTHO05D001616 2.7e-10 70.5 305 29.8
TAR374G0688 Trochodendron aralioides HOM05D001414 ORTHO05D000619 4.7e-10 69.7 301 29.2
Aqoxy5G04071 Aquilegia oxysepala HOM05D001555 ORTHO05D001616 8.0e-10 68.9 322 28.0
Atru.chr5.555 Acer truncatum HOM05D001555 ORTHO05D001616 1.0e-09 68.6 298 29.5
Sc01g0003250 Simmondsia chinensis HOM05D001555 ORTHO05D001616 1.0e-09 68.6 304 30.6
FvH4_7g15170 Fragaria vesca HOM05D001555 ORTHO05D001616 1.4e-09 68.2 312 29.8
FAN01G1448 Fragaria x ananassa HOM05D001555 ORTHO05D001616 1.4e-09 68.2 312 29.8
FAN03G1316 Fragaria x ananassa HOM05D001555 ORTHO05D001616 1.4e-09 68.2 312 29.8
FAN06G2376 Fragaria x ananassa HOM05D001555 ORTHO05D001616 1.4e-09 68.2 312 29.8
FAN06G3909 Fragaria x ananassa HOM05D001555 ORTHO05D001616 1.4e-09 68.2 312 29.8
Lj7C508G10 Lonicera japonica HOM05D001555 ORTHO05D001616 1.4e-09 68.2 319 28.5
QL04p055176 Quercus lobata HOM05D001555 ORTHO05D001616 1.4e-09 68.2 294 30.6
RcHm_v2.0_Chr1g0357581 Rosa chinensis HOM05D001555 ORTHO05D001616 1.4e-09 68.2 314 29.3
FAN10G0139 Fragaria x ananassa HOM05D001555 ORTHO05D001616 1.8e-09 67.8 312 29.8
FAN10G0166 Fragaria x ananassa HOM05D001555 ORTHO05D001616 1.8e-09 67.8 312 29.8
MSTRG.20859 Avicennia marina HOM05D001555 ORTHO05D001616 4.0e-09 66.6 306 28.8
TAR375G0826 Trochodendron aralioides HOM05D001555 ORTHO05D001616 4.0e-09 66.6 314 28.7
Gorai.004G159900 Gossypium raimondii HOM05D001555 ORTHO05D001616 5.2e-09 66.2 298 29.5
Sc14g0002080 Simmondsia chinensis HOM05D001555 ORTHO05D001616 5.2e-09 66.2 299 31.8
Actinidia18538 Actinidia chinensis HOM05D001555 ORTHO05D001616 6.8e-09 65.9 317 29.0
Gohir.D08G154000 Gossypium hirsutum HOM05D001555 ORTHO05D001616 6.8e-09 65.9 298 29.5
PSO782G2958 Papaver somniferum HOM05D001555 ORTHO05D001616 6.8e-09 65.9 310 30.3
Hma1.2p1_0623F.1_g191030 Hydrangea macrophylla HOM05D001555 ORTHO05D001616 1.2e-08 65.1 305 29.2
Hma1.2p1_0623F.1_g191041 Hydrangea macrophylla HOM05D001555 ORTHO05D001616 1.2e-08 65.1 305 29.2
Nn1g01663 Nelumbo nucifera HOM05D001555 ORTHO05D001616 1.2e-08 65.1 307 27.7
Sed0005709 Sechium edule HOM05D001555 ORTHO05D001616 1.2e-08 65.1 320 28.8
CSS0021057 Camellia sinensis var. sinensis HOM05D001555 ORTHO05D001616 1.5e-08 64.7 315 28.6
PSO478G2390 Papaver somniferum HOM05D001555 ORTHO05D001616 1.5e-08 64.7 310 30.0
CDE04G2292 Ceratophyllum demersum HOM05D001555 ORTHO05D001616 2.0e-08 64.3 302 28.1
CSS0011140 Camellia sinensis var. sinensis HOM05D001555 ORTHO05D001616 2.6e-08 63.9 301 29.6
Hund00269 Selenicereus undatus HOM05D001555 ORTHO05D001616 2.6e-08 63.9 309 28.8
Sc02g0006130 Simmondsia chinensis HOM05D001555 ORTHO05D001616 2.6e-08 63.9 301 30.6
vmacro20900 Vaccinium macrocarpon HOM05D001555 ORTHO05D001616 2.6e-08 63.9 309 28.5
MD01G1070200 Malus domestica HOM05D001555 ORTHO05D001616 3.4e-08 63.5 310 28.1
SEGI_01002 Sequoiadendron giganteum HOM05D001555 ORTHO05D009691 4.4e-08 63.2 194 28.4
ClCG05G001280 Citrullus lanatus HOM05D001555 ORTHO05D001616 5.7e-08 62.8 306 27.8
Lalb_Chr19g0138631 Lupinus albus HOM05D001555 ORTHO05D001616 5.7e-08 62.8 298 28.9
CsaV3_3G008640 Cucumis sativus L. HOM05D001555 ORTHO05D001616 7.5e-08 62.4 306 27.8
Sed0006634 Sechium edule HOM05D001555 ORTHO05D001616 7.5e-08 62.4 304 28.9
Thecc.01G353200 Theobroma cacao HOM05D001555 ORTHO05D001616 7.5e-08 62.4 289 29.4
MELO3C006084.2 Cucumis melo HOM05D001555 ORTHO05D001616 9.8e-08 62.0 307 28.0
Nn6g32428 Nelumbo nucifera HOM05D001555 ORTHO05D001616 9.8e-08 62.0 312 27.9
TWI56G0868 Tripterygium wilfordii HOM05D001555 ORTHO05D001616 1.3e-07 61.6 311 28.0
GSVIVG01026960001 Vitis vinifera HOM05D001555 ORTHO05D001616 1.3e-07 61.6 311 27.7
TWI36G0036 Tripterygium wilfordii HOM05D001555 ORTHO05D001616 1.7e-07 61.2 316 29.1
FAN15G0075 Fragaria x ananassa HOM05D001555 ORTHO05D001616 2.2e-07 60.8 304 29.6
Aqoxy6G01105 Aquilegia oxysepala HOM05D001555 ORTHO05D001616 2.8e-07 60.5 304 29.6
FAN20G1922 Fragaria x ananassa HOM05D001555 ORTHO05D001616 2.8e-07 60.5 299 28.1
VMungo1127G1246 Vigna mungo HOM05D001555 ORTHO05D001616 2.8e-07 60.5 302 29.5
FvH4_2g39840 Fragaria vesca HOM05D001555 ORTHO05D001616 3.7e-07 60.1 298 28.2
Lalb_Chr01g0002561 Lupinus albus HOM05D001555 ORTHO05D001616 3.7e-07 60.1 305 30.2
Potri.014G089600 Populus trichocarpa HOM05D001555 ORTHO05D001616 3.7e-07 60.1 305 29.5
Sed0001114 Sechium edule HOM05D001555 ORTHO05D001616 3.7e-07 60.1 297 30.3
Cc02_g17580 Coffea canephora HOM05D001555 ORTHO05D001616 4.8e-07 59.7 294 28.2
Duzib138G1274 Durio zibethinus HOM05D004139 ORTHO05D004873 4.8e-07 59.7 297 28.6
Eucgr.F01567 Eucalyptus grandis HOM05D001555 ORTHO05D001616 4.8e-07 59.7 303 27.4
MBI04_g15072_MAGBIO Magnolia biondii HOM05D001555 ORTHO05D001616 6.3e-07 59.3 330 28.2
DCAR_008756 Daucus carota HOM05D001555 ORTHO05D001616 8.3e-07 58.9 301 29.9
Migut.N01464 Erythranthe guttata HOM05D001555 ORTHO05D001616 8.3e-07 58.9 303 28.7
Manes.05G159800 Manihot esculenta HOM05D001555 ORTHO05D001616 8.3e-07 58.9 304 28.9
QL11p043655 Quercus lobata HOM05D001555 ORTHO05D001616 8.3e-07 58.9 300 28.3
RcHm_v2.0_Chr6g0301001 Rosa chinensis HOM05D001555 ORTHO05D001616 8.3e-07 58.9 308 31.2
SalBow7G1397 Salvia bowleyana HOM05D001555 ORTHO05D001616 8.3e-07 58.9 311 28.6
SMO356G0264 Selaginella moellendorffii HOM05D001555 ORTHO05D001616 8.3e-07 58.9 307 28.0
CiPaw.01G066000 Carya illinoinensis HOM05D001555 ORTHO05D001616 1.1e-06 58.5 303 27.1
CiPaw.05G064300 Carya illinoinensis HOM05D001555 ORTHO05D001616 1.1e-06 58.5 315 28.9
FAN27G1850 Fragaria x ananassa HOM05D001555 ORTHO05D001616 1.1e-06 58.5 304 28.6
Gohir.A05G194300 Gossypium hirsutum HOM05D001555 ORTHO05D001616 1.1e-06 58.5 307 27.7
HanXRQChr16g0521801 Helianthus annuus HOM05D001555 ORTHO05D001616 1.1e-06 58.5 300 27.7
Hund06232 Selenicereus undatus HOM05D001555 ORTHO05D001616 1.1e-06 58.5 312 28.5
TWI59G0388 Tripterygium wilfordii HOM05D004139 ORTHO05D004873 1.1e-06 58.5 302 27.5
COL.COLO4_26322 Corchorus olitorius HOM05D001555 ORTHO05D001616 1.4e-06 58.2 311 27.3
Dinv32516 Davidia involucrata HOM05D001555 ORTHO05D001616 1.4e-06 58.2 305 26.2
ECA232G3268 Erigeron canadensis HOM05D001555 ORTHO05D001616 1.4e-06 58.2 300 30.3
THA.LOC104798638 Tarenaya hassleriana HOM05D001555 ORTHO05D001616 1.4e-06 58.2 297 29.0
Gohir.A11G092000 Gossypium hirsutum HOM05D001555 ORTHO05D001616 1.8e-06 57.8 293 28.7
Gohir.D11G096800 Gossypium hirsutum HOM05D001555 ORTHO05D001616 1.8e-06 57.8 293 28.7
Pp3c10_16330 Physcomitrium patens HOM05D001555 ORTHO05D001616 1.8e-06 57.8 309 27.8
Pp3c1_15940 Physcomitrium patens HOM05D001555 ORTHO05D001616 1.8e-06 57.8 307 26.1
PGR042G0054 Punica granatum HOM05D001555 ORTHO05D001616 1.8e-06 57.8 306 27.5
Hund27247 Selenicereus undatus HOM05D001555 ORTHO05D001616 1.8e-06 57.8 297 28.3
TWI12G1279 Tripterygium wilfordii HOM05D001555 ORTHO05D001616 1.8e-06 57.8 309 30.1
Aa31LG7G4120 Aethionema arabicum HOM05D001555 ORTHO05D001616 2.4e-06 57.4 290 28.6
CDE12G0908 Ceratophyllum demersum HOM05D001555 ORTHO05D001616 2.4e-06 57.4 300 27.3
Ciclev10001904m.g Citrus clementina HOM05D001555 ORTHO05D001616 2.4e-06 57.4 310 27.7
Glyma.12G043400 Glycine max HOM05D001555 ORTHO05D001616 2.4e-06 57.4 305 31.5
Medtr1g022190 Medicago truncatula HOM05D001555 ORTHO05D001616 2.4e-06 57.4 302 29.8
Rhsim01G0165500 Rhododendron simsii HOM05D001555 ORTHO05D001616 2.4e-06 57.4 186 27.4
Rhsim11G0002600 Rhododendron simsii HOM05D001555 ORTHO05D001616 2.4e-06 57.4 186 27.4
CsaV3_2G028650 Cucumis sativus L. HOM05D001555 ORTHO05D001616 3.1e-06 57.0 301 29.2
DCAR_003675 Daucus carota HOM05D001555 ORTHO05D001616 3.1e-06 57.0 304 29.6
Duzib093G1024 Durio zibethinus HOM05D001555 ORTHO05D001616 3.1e-06 57.0 312 27.9
Gorai.007G103100 Gossypium raimondii HOM05D001555 ORTHO05D001616 3.1e-06 57.0 293 28.7
BcaB02g07014 Brassica carinata HOM05D001555 ORTHO05D001616 4.1e-06 56.6 347 26.8
Cc10_g02910 Coffea canephora HOM05D001555 ORTHO05D001616 4.1e-06 56.6 311 28.3
Haze_15556 Corylus avellana HOM05D001555 ORTHO05D001616 4.1e-06 56.6 307 29.0
Duzib052G1057 Durio zibethinus HOM05D001555 ORTHO05D001616 4.1e-06 56.6 334 28.4
Thhalv10018884m.g Eutrema salsugineum HOM05D001555 ORTHO05D001616 4.1e-06 56.6 349 26.6
Glyma.11G118000 Glycine max HOM05D001555 ORTHO05D001616 4.1e-06 56.6 305 31.5
Gohir.D05G197500 Gossypium hirsutum HOM05D001555 ORTHO05D001616 4.1e-06 56.6 307 27.0
Gorai.009G202400 Gossypium raimondii HOM05D001555 ORTHO05D001616 4.1e-06 56.6 307 27.0
Manes.17G100900 Manihot esculenta HOM05D001555 ORTHO05D001616 4.1e-06 56.6 303 28.7
Peaxi162Scf00016g00824 Petunia axillaris HOM05D001555 ORTHO05D001616 4.1e-06 56.6 297 30.0
CARHR000870 Cardamine hirsuta HOM05D001555 ORTHO05D001616 5.4e-06 56.2 293 27.0
Ciclev10028884m.g Citrus clementina HOM05D001555 ORTHO05D001616 5.4e-06 56.2 302 28.1
Sp5g30330 Schrenkiella parvula HOM05D001555 ORTHO05D001616 5.4e-06 56.2 344 26.5
BcaNung06628 Brassica carinata HOM05D001555 ORTHO05D001616 7.0e-06 55.8 347 26.8
BolC8t51821H Brassica oleracea HOM05D001555 ORTHO05D001616 7.0e-06 55.8 299 26.4
MELO3C010938.2 Cucumis melo HOM05D001555 ORTHO05D001616 7.0e-06 55.8 295 27.8
Oeu000773.1 Olea europaea HOM05D001555 ORTHO05D001616 7.0e-06 55.8 309 28.8
Oeu000774.1 Olea europaea HOM05D001555 ORTHO05D001616 7.0e-06 55.8 309 28.8
Psat6g006840 Pisum sativum HOM05D001555 ORTHO05D001616 7.0e-06 55.8 309 29.1
Potri.002G163300 Populus trichocarpa HOM05D001555 ORTHO05D001616 7.0e-06 55.8 307 27.4
THA.LOC104806944 Tarenaya hassleriana HOM05D001555 ORTHO05D001616 7.0e-06 55.8 299 29.8
TPR.G20166 Trifolium pratense HOM05D001555 ORTHO05D001616 7.0e-06 55.8 300 28.7
HPP92_012918 Vanilla planifolia HOM05D001555 ORTHO05D001616 7.0e-06 55.8 312 27.6
Atru.chr5.3013 Acer truncatum HOM05D001555 ORTHO05D001616 9.1e-06 55.5 313 30.7
C08p42600 Brassica napus HOM05D001555 ORTHO05D001616 9.1e-06 55.5 299 26.4
Dinv36078 Davidia involucrata HOM05D001555 ORTHO05D001616 9.1e-06 55.5 297 27.9
Lalb_Chr03g0025711 Lupinus albus HOM05D001555 ORTHO05D001616 9.1e-06 55.5 301 28.6
Sabra02G0198800 Salix brachista HOM05D001555 ORTHO05D001616 9.1e-06 55.5 300 28.7


User provided reference genes

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