Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO724G0293 Papaver somniferum HOM05D004219 ORTHO05D004857 0.0e+00 1577.0 784 100.0
PSO135G0149 Papaver somniferum HOM05D004219 ORTHO05D004857 0.0e+00 1501.5 784 95.0
TAR383G0549 Trochodendron aralioides HOM05D004219 ORTHO05D004857 0.0e+00 1140.6 788 72.1
Nn6g35715 Nelumbo nucifera HOM05D004219 ORTHO05D004857 0.0e+00 1124.4 791 71.6
MBI13_g01684_MAGBIO Magnolia biondii HOM05D004219 ORTHO05D004857 0.0e+00 1120.5 777 72.2
Dinv20389 Davidia involucrata HOM05D004219 ORTHO05D004857 0.0e+00 1092.8 784 70.7
Aqoxy7G00940 Aquilegia oxysepala HOM05D004219 ORTHO05D004857 0.0e+00 1087.4 786 69.6
TAR624G1175 Trochodendron aralioides HOM05D004219 ORTHO05D004857 0.0e+00 1084.3 799 69.1
Manes.16G089900 Manihot esculenta HOM05D004219 ORTHO05D004857 0.0e+00 1075.5 769 70.9
GSVIVG01016680001 Vitis vinifera HOM05D004219 ORTHO05D004857 5.4e-312 1073.5 767 70.7
Cc04_g00810 Coffea canephora HOM05D004219 ORTHO05D004857 1.5e-309 1065.8 783 68.7
Lj5A30T66 Lonicera japonica HOM05D004219 ORTHO05D004857 2.2e-308 1062.0 757 70.3
Ciclev10007563m.g Citrus clementina HOM05D004219 ORTHO05D004857 1.4e-307 1059.3 769 69.3
TWI63G0110 Tripterygium wilfordii HOM05D004219 ORTHO05D004857 1.9e-307 1058.9 770 69.4
CiPaw.01G212300 Carya illinoinensis HOM05D004219 ORTHO05D004857 5.5e-307 1057.4 783 67.9
CSS0038823 Camellia sinensis var. sinensis HOM05D004219 ORTHO05D004857 1.2e-306 1056.2 788 69.0
CSS0000587 Camellia sinensis var. sinensis HOM05D004219 ORTHO05D004857 2.7e-306 1055.0 788 69.0
Cpa.g.sc82.51 Carica papaya HOM05D004219 ORTHO05D004857 3.6e-306 1054.7 765 69.8
Thecc.09G069400 Theobroma cacao HOM05D004219 ORTHO05D004857 3.6e-306 1054.7 770 69.6
QL11p003182 Quercus lobata HOM05D004219 ORTHO05D004857 1.4e-305 1052.7 769 69.4
Actinidia21828 Actinidia chinensis HOM05D004219 ORTHO05D004857 1.8e-305 1052.4 781 68.2
Cfa003467 Carpinus fangiana HOM05D004219 ORTHO05D004857 8.8e-305 1050.0 782 66.6
QL05p001749 Quercus lobata HOM05D004219 ORTHO05D004857 3.3e-304 1048.1 780 67.1
Potri.006G135500 Populus trichocarpa HOM05D004219 ORTHO05D004857 7.4e-304 1047.0 769 69.6
TWI34G1001 Tripterygium wilfordii HOM05D004219 ORTHO05D004857 7.4e-304 1047.0 768 68.6
QL05p001473 Quercus lobata HOM05D004219 ORTHO05D004857 9.7e-304 1046.6 780 67.1
Duzib187G1712 Durio zibethinus HOM05D004219 ORTHO05D004857 2.2e-303 1045.4 774 69.3
Nitab4.5_0004589g0030 Nicotiana tabacum HOM05D004219 ORTHO05D004857 1.1e-302 1043.1 780 68.7
Duzib168G0770 Durio zibethinus HOM05D004219 ORTHO05D004857 1.8e-302 1042.3 777 69.4
Nitab4.5_0000357g0090 Nicotiana tabacum HOM05D004219 ORTHO05D004857 3.1e-302 1041.6 780 68.3
Rhsim08G0243800 Rhododendron simsii HOM05D004219 ORTHO05D004857 6.9e-302 1040.4 810 66.4
Sabra18G0057200 Salix brachista HOM05D004219 ORTHO05D004857 9.1e-302 1040.0 771 69.5
Potri.018G064500 Populus trichocarpa HOM05D004219 ORTHO05D004857 1.2e-301 1039.6 775 69.3
GSVIVG01015005001 Vitis vinifera HOM05D004219 ORTHO05D004857 5.9e-301 1037.3 767 70.5
Duzib150G0120 Durio zibethinus HOM05D004219 ORTHO05D004857 1.3e-300 1036.2 781 68.4
vmacro15080 Vaccinium macrocarpon HOM05D004219 ORTHO05D004857 5.0e-300 1034.2 794 67.0
CAN.G1721.2 Capsicum annuum HOM05D004219 ORTHO05D004857 6.5e-300 1033.9 781 67.5
Peaxi162Scf00177g00619 Petunia axillaris HOM05D004219 ORTHO05D004857 8.5e-300 1033.5 776 67.7
CiPaw.02G131700 Carya illinoinensis HOM05D004219 ORTHO05D004857 1.1e-299 1033.1 783 66.4
Manes.03G045300 Manihot esculenta HOM05D004219 ORTHO05D004857 1.4e-299 1032.7 767 68.1
PGSC0003DMG400028852 Solanum tuberosum HOM05D004219 ORTHO05D004857 2.7e-298 1028.5 780 67.2
Sopen12g024040 Solanum pennellii HOM05D004219 ORTHO05D004857 3.6e-298 1028.1 781 67.6
Prupe.3G031800 Prunus persica HOM05D004219 ORTHO05D004857 4.7e-298 1027.7 785 66.9
Solyc12g049570.3 Solanum lycopersicum HOM05D004219 ORTHO05D004857 2.3e-297 1025.4 781 67.3
CANSAT56G2968 Cannabis sativa HOM05D004219 ORTHO05D004857 1.1e-296 1023.1 786 65.8
Gohir.A07G017500 Gossypium hirsutum HOM05D004219 ORTHO05D004857 1.5e-296 1022.7 771 68.5
Gorai.001G018000 Gossypium raimondii HOM05D004219 ORTHO05D004857 1.7e-295 1019.2 773 68.3
Eucgr.C00764 Eucalyptus grandis HOM05D004219 ORTHO05D004857 6.3e-295 1017.3 768 67.4
RcHm_v2.0_Chr2g0147711 Rosa chinensis HOM05D004219 ORTHO05D004857 6.3e-295 1017.3 776 65.6
Gorai.010G095800 Gossypium raimondii HOM05D004219 ORTHO05D004857 1.8e-294 1015.8 774 68.0
Gorai.009G038600 Gossypium raimondii HOM05D004219 ORTHO05D004857 7.0e-294 1013.8 771 68.0
MD17G1153300 Malus domestica HOM05D004219 ORTHO05D004857 1.5e-293 1012.7 790 65.6
Gohir.D05G038100 Gossypium hirsutum HOM05D004219 ORTHO05D004857 2.2e-292 1008.8 771 67.8
FAN09G1853 Fragaria x ananassa HOM05D004219 ORTHO05D004857 3.8e-292 1008.1 776 65.3
FvH4_6g35710 Fragaria vesca HOM05D004219 ORTHO05D004857 1.1e-291 1006.5 776 65.3
FAN14G4832 Fragaria x ananassa HOM05D004219 ORTHO05D004857 1.1e-291 1006.5 776 65.3
MD09G1173700 Malus domestica HOM05D004219 ORTHO05D004857 4.2e-291 1004.6 789 64.9
Gohir.A05G036600 Gossypium hirsutum HOM05D004219 ORTHO05D004857 2.7e-290 1001.9 770 67.1
Gohir.A06G084100 Gossypium hirsutum HOM05D004219 ORTHO05D004857 4.7e-290 1001.1 771 67.6
FAN02G2730 Fragaria x ananassa HOM05D004219 ORTHO05D004857 3.9e-289 998.0 776 64.7
Glyma.16G013100 Glycine max HOM05D004219 ORTHO05D004857 2.6e-288 995.3 786 64.0
DCAR_016092 Daucus carota HOM05D004219 ORTHO05D004857 2.8e-287 991.9 787 64.7
Glyma.07G045100 Glycine max HOM05D004219 ORTHO05D004857 5.3e-286 987.6 782 63.7
Oeu059024.1 Olea europaea HOM05D004219 ORTHO05D004857 3.5e-285 984.9 780 64.6
Phvul.010G123900 Phaseolus vulgaris HOM05D004219 ORTHO05D004857 7.7e-285 983.8 797 63.2
ATR0099G075 Amborella trichopoda HOM05D004219 ORTHO05D004857 1.0e-284 983.4 808 63.2
HanXRQChr09g0277221 Helianthus annuus HOM05D004219 ORTHO05D004857 1.0e-284 983.4 759 66.4
Hund05707 Selenicereus undatus HOM05D004219 ORTHO05D004857 1.3e-284 983.0 780 64.7
Migut.I01126 Erythranthe guttata HOM05D004219 ORTHO05D004857 2.2e-284 982.2 779 64.2
Glyma.U031325 Glycine max HOM05D004219 ORTHO05D004857 7.2e-283 977.2 773 65.3
Lj6g0016067 Lotus japonicus HOM05D004219 ORTHO05D004857 8.0e-282 973.8 770 65.5
Glyma.09G074300 Glycine max HOM05D004219 ORTHO05D004857 1.0e-281 973.4 771 65.6
Gohir.D06G082300 Gossypium hirsutum HOM05D004219 ORTHO05D004857 1.8e-281 972.6 774 65.9
PGR142G3683 Punica granatum HOM05D004219 ORTHO05D004857 1.8e-281 972.6 769 64.4
CDE04G3533 Ceratophyllum demersum HOM05D004219 ORTHO05D004857 1.2e-280 969.9 785 63.7
Lalb_Chr08g0232811 Lupinus albus HOM05D004219 ORTHO05D004857 5.7e-280 967.6 765 64.3
Lalb_Chr17g0343311 Lupinus albus HOM05D004219 ORTHO05D004857 2.2e-279 965.7 783 62.6
Sed0001277 Sechium edule HOM05D004219 ORTHO05D004857 3.7e-279 964.9 791 62.1
VMungo0331G1133 Vigna mungo HOM05D004219 ORTHO05D004857 8.2e-279 963.8 791 62.1
Phvul.009G223200 Phaseolus vulgaris HOM05D004219 ORTHO05D004857 1.8e-278 962.6 771 64.3
Aqoxy7G04168 Aquilegia oxysepala HOM05D004219 ORTHO05D004857 2.4e-278 962.2 777 61.9
MELO3C022696.2 Cucumis melo HOM05D004219 ORTHO05D004857 2.4e-278 962.2 790 62.5
Medtr8g022980 Medicago truncatula HOM05D004219 ORTHO05D004857 4.1e-278 961.4 772 63.6
CsaV3_3G030980 Cucumis sativus L. HOM05D004219 ORTHO05D004857 5.3e-278 961.1 790 62.7
Lj3g0000905 Lotus japonicus HOM05D004219 ORTHO05D004857 7.0e-278 960.7 785 62.9
Lalb_Chr04g0253891 Lupinus albus HOM05D004219 ORTHO05D004857 7.0e-278 960.7 781 62.4
VMungo1309G2772 Vigna mungo HOM05D004219 ORTHO05D004857 7.0e-278 960.7 774 64.0
Thhalv10002415m.g Eutrema salsugineum HOM05D004219 ORTHO05D004857 1.6e-277 959.5 767 64.3
Lalb_Chr23g0276141 Lupinus albus HOM05D004219 ORTHO05D004857 2.7e-277 958.7 773 63.8
HPP92_019289 Vanilla planifolia HOM05D004219 ORTHO05D004857 3.5e-277 958.4 784 61.7
Cfa002934 Carpinus fangiana HOM05D004219 ORTHO05D004857 7.7e-277 957.2 743 66.8
Ca_23428_v3 Cicer arietinum L. HOM05D004219 ORTHO05D004857 7.7e-277 957.2 784 63.4
Psat4g165840 Pisum sativum HOM05D004219 ORTHO05D004857 3.8e-276 954.9 784 62.6
TPR.G18148 Trifolium pratense HOM05D004219 ORTHO05D004857 5.0e-276 954.5 784 62.1
Sp5g18450 Schrenkiella parvula HOM05D004219 ORTHO05D004857 6.5e-276 954.1 761 64.8
Haze_16129 Corylus avellana HOM05D004219 ORTHO05D004857 2.5e-275 952.2 830 59.8
Carub.0005s0906 Capsella rubella HOM05D004219 ORTHO05D004857 4.2e-275 951.4 767 64.1
AL5G21340 Arabidopsis lyrata HOM05D004219 ORTHO05D004857 7.2e-275 950.7 768 63.7
AT3G43240 Arabidopsis thaliana HOM05D004219 ORTHO05D004857 2.7e-274 948.7 762 63.6
CARHR153440 Cardamine hirsuta HOM05D004219 ORTHO05D004857 2.7e-274 948.7 761 63.9
Medtr2g044550 Medicago truncatula HOM05D004219 ORTHO05D004857 4.7e-274 948.0 774 63.0
AUR62025624 Chenopodium quinoa HOM05D004219 ORTHO05D004857 4.0e-273 944.9 834 59.5
Sed0013084 Sechium edule HOM05D004219 ORTHO05D004857 6.8e-273 944.1 786 60.8
ECA232G2871 Erigeron canadensis HOM05D004219 ORTHO05D004857 8.8e-273 943.7 771 63.3
TPR.G26875 Trifolium pratense HOM05D004219 ORTHO05D004857 2.6e-272 942.2 776 63.0
BcaC01g02109 Brassica carinata HOM05D004219 ORTHO05D004857 7.5e-272 940.6 764 63.6
Sc15g0000780 Simmondsia chinensis HOM05D004219 ORTHO05D004857 7.5e-272 940.6 780 61.7
Gohir.D07G017300 Gossypium hirsutum HOM05D004219 ORTHO05D004857 9.8e-272 940.3 772 64.1
A06p22640 Brassica napus HOM05D004219 ORTHO05D004857 2.8e-271 938.7 765 63.7
BcaB01g01229 Brassica carinata HOM05D004219 ORTHO05D004857 1.6e-269 932.9 763 63.6
THA.LOC104799604 Tarenaya hassleriana HOM05D004219 ORTHO05D004857 1.7e-268 929.5 766 62.4
TAR626G0374 Trochodendron aralioides HOM05D004219 ORTHO05D004857 1.7e-268 929.5 775 62.3
ClCG09G001310 Citrullus lanatus HOM05D004219 ORTHO05D004857 2.9e-268 928.7 785 60.6
EL10Ac7g16483 Beta vulgaris HOM05D004219 ORTHO05D004857 8.6e-268 927.2 799 60.7
BolC3t19092H Brassica oleracea HOM05D004219 ORTHO05D004857 7.2e-267 924.1 768 63.0
ClCG07G014320 Citrullus lanatus HOM05D004219 ORTHO05D004857 2.6e-264 915.6 765 62.1
Zm00001eb313820 Zea mays HOM05D004219 ORTHO05D004857 1.4e-262 909.8 786 59.8
CsaV3_7G034010 Cucumis sativus L. HOM05D004219 ORTHO05D004857 2.4e-262 909.1 785 60.0
Aa31LG4G12950 Aethionema arabicum HOM05D004219 ORTHO05D004857 2.5e-259 899.0 785 60.3
Sed0013718 Sechium edule HOM05D004219 ORTHO05D004857 1.2e-258 896.7 785 59.2
Zm00001eb099960 Zea mays HOM05D004219 ORTHO05D004857 1.0e-257 893.6 787 59.5
Haze_26074 Corylus avellana HOM05D004219 ORTHO05D004857 2.0e-256 889.4 852 57.2
Hma1.2p1_0229F.1_g097030 Hydrangea macrophylla HOM05D004219 ORTHO05D004857 1.3e-255 886.7 720 65.1
COL.COLO4_21198 Corchorus olitorius HOM05D004219 ORTHO05D004857 3.9e-252 875.2 768 60.7
Os08g0451400 Oryza sativa ssp. japonica HOM05D004219 ORTHO05D004857 1.6e-250 869.8 780 56.8
Ah.08g217310 Amaranthus hybridus HOM05D004219 ORTHO05D004857 2.8e-250 869.0 802 57.2
Ca_02284_v3 Cicer arietinum L. HOM05D004219 ORTHO05D004857 2.3e-249 865.9 778 59.9
Lsat_1_v5_gn_4_92081 Lactuca sativa HOM05D004219 ORTHO05D004857 6.6e-244 847.8 726 63.5
unitig_26.g8917 Utricularia gibba HOM05D004219 ORTHO05D004857 1.5e-243 846.7 784 57.8
arahy.Tifrunner.gnm1.ann1.BBC6WZ Arachis hypogaea HOM05D004219 ORTHO05D004857 1.2e-242 843.6 727 61.1
arahy.Tifrunner.gnm1.ann1.82J223 Arachis hypogaea HOM05D004219 ORTHO05D004857 2.1e-242 842.8 727 60.9
MELO3C024313.2 Cucumis melo HOM05D004219 ORTHO05D004857 4.9e-239 831.6 780 56.7
PGR044G2279 Punica granatum HOM05D004219 ORTHO05D004857 4.6e-237 825.1 795 56.4
SGA_v2.0_scaffold71G23915 Striga asiatica HOM05D004219 ORTHO05D004857 2.5e-235 819.3 776 57.1
Eucgr.I02158 Eucalyptus grandis HOM05D004219 ORTHO05D004857 4.9e-231 805.1 772 55.8
Sabra06G0106200 Salix brachista HOM05D004219 ORTHO05D004857 1.6e-226 790.0 701 61.8
Psat1g137920 Pisum sativum HOM05D004219 ORTHO05D004857 1.4e-217 760.4 675 61.9
AUR62001416 Chenopodium quinoa HOM05D004219 ORTHO05D004857 1.2e-208 730.7 748 52.8
Zm00001eb040700 Zea mays HOM05D004219 ORTHO05D004857 7.2e-182 641.7 764 46.2
Mapoly0094s0004 Marchantia polymorpha HOM05D004219 ORTHO05D004857 7.4e-179 631.7 784 44.9
Actinidia24435 Actinidia chinensis HOM05D004219 ORTHO05D004857 2.5e-174 616.7 767 46.4
Pp3c15_1350 Physcomitrium patens HOM05D004219 ORTHO05D004857 4.2e-174 615.9 778 43.8
Pp3c6_26590 Physcomitrium patens HOM05D004219 ORTHO05D004857 3.3e-171 606.3 811 43.0
SMO133G0025 Selaginella moellendorffii HOM05D004219 ORTHO05D004857 8.2e-170 601.7 811 44.3
BraA06t25350Z Brassica rapa HOM05D004219 ORTHO05D004857 8.0e-165 585.1 430 68.8
Atru.chr7.1780 Acer truncatum HOM05D004219 ORTHO05D004857 4.4e-163 579.3 426 69.5
SEGI_01121 Sequoiadendron giganteum HOM05D004219 ORTHO05D004857 1.1e-150 538.1 793 40.0
arahy.Tifrunner.gnm1.ann1.B45F8N Arachis hypogaea HOM05D004219 ORTHO05D004857 5.7e-147 525.8 395 64.1
arahy.Tifrunner.gnm1.ann1.W70I1I Arachis hypogaea HOM05D004219 ORTHO05D004857 5.7e-147 525.8 395 64.1
AagrBONN_evm.TU.Sc2ySwM_344.4361 Anthoceros agrestis HOM05D004219 ORTHO05D004857 4.1e-137 493.0 558 47.5
unitig_749.g14037 Utricularia gibba HOM05D004219 ORTHO05D004857 6.6e-135 485.7 397 62.7
CDE06G0638 Ceratophyllum demersum HOM05D004219 ORTHO05D004857 4.3e-126 456.4 466 54.5
Atru.chr7.1779 Acer truncatum HOM05D004219 ORTHO05D004857 2.9e-122 443.7 272 78.3
CDE06G2764 Ceratophyllum demersum HOM05D004219 ORTHO05D004857 3.1e-116 423.7 254 77.6
Os08g0451700 Oryza sativa ssp. japonica HOM05D004219 ORTHO05D004857 6.4e-114 416.0 472 47.5
CBR_g66811 Chara braunii HOM05D004219 ORTHO05D004857 1.1e-105 388.7 758 35.1
Os09g0434100 Oryza sativa ssp. japonica HOM05D004219 ORTHO05D004857 1.5e-78 298.5 288 54.9
Cre10.g429880 Chlamydomonas reinhardtii HOM05D004219 ORTHO05D004857 7.2e-65 253.1 769 28.2
unitig_749.g14036 Utricularia gibba HOM05D004219 ORTHO05D004857 5.5e-57 226.9 296 45.6
Medtr8g038730 Medicago truncatula HOM05D004219 ORTHO05D004857 4.0e-55 220.7 184 60.9
Nn5g27342 Nelumbo nucifera HOM05D004219 ORTHO05D004857 3.2e-49 201.1 156 64.7
TAR383G0322 Trochodendron aralioides HOM05D004219 ORTHO05D004857 4.5e-43 180.6 150 68.0
Os09g0434000 Oryza sativa ssp. japonica HOM05D004219 ORTHO05D004857 1.5e-38 165.6 89 80.9
FAN05G1825 Fragaria x ananassa HOM05D004219 ORTHO05D004857 7.5e-30 136.7 70 82.9
Os08g0361000 Oryza sativa ssp. japonica HOM05D004219 ORTHO05D004857 2.8e-24 118.2 166 39.2
Os08g0451500 Oryza sativa ssp. japonica HOM05D004219 ORTHO05D004857 3.4e-22 111.3 135 41.5
MCO07G528 Micromonas commoda HOM05D004219 ORTHO05D004857 3.7e-13 81.3 103 41.7
BolSC21t60256H Brassica oleracea HOM05D020425 ORTHO05D021983 3.9e-10 71.2 46 71.7
AUR62025956 Chenopodium quinoa HOM05D000121 ORTHO05D024978 3.3e-09 68.2 50 70.0
Oeu028234.1 Olea europaea HOM05D004219 ORTHO05D004857 9.5e-09 66.6 80 43.8
C03p67880 Brassica napus HOM05D020425 ORTHO05D021983 1.6e-08 65.9 39 71.8


User provided reference genes

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