Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO724G0129 Papaver somniferum HOM05D002335 ORTHO05D006282 2.6e-192 675.2 354 100.0
PSO135G0390 Papaver somniferum HOM05D002335 ORTHO05D006282 1.0e-188 663.3 354 97.7
Nn8g38636 Nelumbo nucifera HOM05D002335 ORTHO05D006282 1.1e-145 520.4 347 77.8
Aqoxy7G04129 Aquilegia oxysepala HOM05D002335 ORTHO05D006282 2.7e-144 515.8 352 77.3
TAR383G0969 Trochodendron aralioides HOM05D002335 ORTHO05D006282 1.4e-140 503.4 349 74.8
Hma1.2p1_0169F.1_g074510 Hydrangea macrophylla HOM05D002335 ORTHO05D006282 1.8e-140 503.1 340 75.0
Gohir.D13G196375 Gossypium hirsutum HOM05D002335 ORTHO05D006282 1.2e-136 490.3 353 71.4
Ciclev10008755m.g Citrus clementina HOM05D002335 ORTHO05D006282 1.0e-135 487.3 346 72.5
CiPaw.04G143000 Carya illinoinensis HOM05D002335 ORTHO05D006282 1.3e-135 486.9 354 70.6
Cfa002987 Carpinus fangiana HOM05D002335 ORTHO05D006282 3.0e-135 485.7 346 70.5
Gorai.013G224300 Gossypium raimondii HOM05D002335 ORTHO05D006282 3.0e-135 485.7 354 71.2
ClCG03G015070 Citrullus lanatus HOM05D002335 ORTHO05D006282 1.1e-134 483.8 351 69.5
Sed0016034 Sechium edule HOM05D002335 ORTHO05D006282 3.3e-134 482.3 351 69.5
Gohir.A13G190800 Gossypium hirsutum HOM05D002335 ORTHO05D006282 5.6e-134 481.5 353 70.5
FvH4_1g08690 Fragaria vesca HOM05D002335 ORTHO05D006282 2.1e-133 479.6 346 70.2
MBI19_g16223_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006282 8.1e-133 477.6 345 71.3
Migut.J00924 Erythranthe guttata HOM05D002335 ORTHO05D006282 2.4e-132 476.1 352 69.6
Potri.018G056500 Populus trichocarpa HOM05D002335 ORTHO05D006282 1.5e-131 473.4 354 70.3
Solyc12g009100.2 Solanum lycopersicum HOM05D002335 ORTHO05D006282 2.0e-131 473.0 345 69.9
Sopen12g004050 Solanum pennellii HOM05D002335 ORTHO05D006282 2.0e-131 473.0 345 70.1
Dinv42395 Davidia involucrata HOM05D002335 ORTHO05D006282 9.9e-131 470.7 352 69.9
Phvul.009G227200 Phaseolus vulgaris HOM05D002335 ORTHO05D006282 9.9e-131 470.7 349 69.9
Glyma.15G177700 Glycine max HOM05D002335 ORTHO05D006282 2.2e-130 469.5 348 69.3
VMungo1309G0226 Vigna mungo HOM05D002335 ORTHO05D006282 3.8e-130 468.8 355 68.5
Dinv25558 Davidia involucrata HOM05D002335 ORTHO05D006282 4.9e-130 468.4 340 70.3
Peaxi162Scf00928g00036 Petunia axillaris HOM05D002335 ORTHO05D006282 5.4e-129 464.9 329 70.8
Glyma.09G069700 Glycine max HOM05D002335 ORTHO05D006282 2.1e-128 463.0 348 69.5
ATR0598G025 Amborella trichopoda HOM05D002335 ORTHO05D006282 4.6e-128 461.8 345 67.8
GSVIVG01015081001 Vitis vinifera HOM05D002335 ORTHO05D006282 6.0e-128 461.5 345 69.3
TPR.G27760 Trifolium pratense HOM05D002335 ORTHO05D006282 1.0e-127 460.7 352 67.9
CSS0005090 Camellia sinensis var. sinensis HOM05D002335 ORTHO05D006282 3.0e-127 459.1 353 68.6
Manes.16G095200 Manihot esculenta HOM05D002335 ORTHO05D006282 3.9e-127 458.8 346 68.8
Eucgr.C03328 Eucalyptus grandis HOM05D002335 ORTHO05D006282 6.6e-127 458.0 330 69.7
Thecc.09G076700 Theobroma cacao HOM05D002335 ORTHO05D006282 3.3e-126 455.7 348 68.1
AUR62028934 Chenopodium quinoa HOM05D002335 ORTHO05D006282 7.3e-126 454.5 345 68.1
Duzib187G0696 Durio zibethinus HOM05D002335 ORTHO05D006282 1.8e-124 449.9 354 66.4
EL10Ac8g19056 Beta vulgaris HOM05D002335 ORTHO05D006282 3.4e-123 445.7 373 64.3
Lj6g0009960 Lotus japonicus HOM05D002335 ORTHO05D006282 3.4e-123 445.7 355 67.3
TWI34G0307 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 1.3e-122 443.7 347 66.9
HanXRQChr04g0126011 Helianthus annuus HOM05D002335 ORTHO05D006282 2.4e-121 439.5 348 65.8
MD02G1091400 Malus domestica HOM05D002335 ORTHO05D006282 4.2e-121 438.7 343 66.8
Eucgr.C03263 Eucalyptus grandis HOM05D002335 ORTHO05D006282 1.6e-120 436.8 326 68.7
Cc06_g12190 Coffea canephora HOM05D002335 ORTHO05D006282 3.5e-120 435.6 351 65.2
Duzib168G0796 Durio zibethinus HOM05D002335 ORTHO05D006282 7.9e-120 434.5 330 67.6
HPP92_004364 Vanilla planifolia HOM05D002335 ORTHO05D006282 1.8e-119 433.3 340 65.3
MSTRG.19458 Avicennia marina HOM05D002335 ORTHO05D006282 2.3e-119 433.0 352 64.8
Sabra18G0052300 Salix brachista HOM05D002335 ORTHO05D006282 2.3e-119 433.0 433 56.6
COL.COLO4_18096 Corchorus olitorius HOM05D002335 ORTHO05D006282 3.9e-119 432.2 344 67.2
THA.LOC104815334 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 5.1e-119 431.8 350 65.1
BcaB06g26879 Brassica carinata HOM05D002335 ORTHO05D006282 8.7e-119 431.0 338 66.6
ECA236G4601 Erigeron canadensis HOM05D002335 ORTHO05D006282 8.7e-119 431.0 341 63.9
Actinidia29935 Actinidia chinensis HOM05D002335 ORTHO05D006282 1.1e-118 430.6 349 66.2
Aa31sc133G10 Aethionema arabicum HOM05D002335 ORTHO05D006282 1.5e-118 430.3 352 65.1
FAN26G1551 Fragaria x ananassa HOM05D002335 ORTHO05D006282 1.5e-118 430.3 346 65.0
FAN28G1803 Fragaria x ananassa HOM05D002335 ORTHO05D006282 4.3e-118 428.7 346 64.7
Zm00001eb256890 Zea mays HOM05D002335 ORTHO05D006282 4.3e-118 428.7 354 64.1
CANSAT56G2952 Cannabis sativa HOM05D002335 ORTHO05D006282 2.1e-117 426.4 354 65.0
CsaV3_1G041060 Cucumis sativus L. HOM05D002335 ORTHO05D006282 2.8e-117 426.0 351 63.8
Lsat_1_v5_gn_8_86481 Lactuca sativa HOM05D002335 ORTHO05D006282 2.8e-117 426.0 344 62.5
Ca_02205_v3 Cicer arietinum L. HOM05D002335 ORTHO05D006282 4.8e-117 425.2 354 64.4
MELO3C015522.2 Cucumis melo HOM05D002335 ORTHO05D006282 6.2e-117 424.9 351 63.5
A07p06320 Brassica napus HOM05D002335 ORTHO05D006282 8.1e-117 424.5 337 65.6
Manes.03G040500 Manihot esculenta HOM05D002335 ORTHO05D006282 1.8e-116 423.3 351 64.4
C07p09370 Brassica napus HOM05D002335 ORTHO05D006282 3.1e-116 422.5 326 67.2
BolC7t41360H Brassica oleracea HOM05D002335 ORTHO05D006282 3.1e-116 422.5 326 67.2
Haze_26014 Corylus avellana HOM05D002335 ORTHO05D006282 3.1e-116 422.5 384 60.2
Hund26035 Selenicereus undatus HOM05D002335 ORTHO05D006282 3.1e-116 422.5 297 72.1
BcaC06g35950 Brassica carinata HOM05D002335 ORTHO05D006282 4.0e-116 422.2 339 65.8
Nitab4.5_0011754g0010 Nicotiana tabacum HOM05D002335 ORTHO05D006282 9.0e-116 421.0 346 65.0
RcHm_v2.0_Chr2g0095141 Rosa chinensis HOM05D002335 ORTHO05D006282 1.2e-115 420.6 351 64.1
BraA07t28424Z Brassica rapa HOM05D002335 ORTHO05D006282 3.4e-115 419.1 342 64.6
Thhalv10014003m.g Eutrema salsugineum HOM05D002335 ORTHO05D006282 1.7e-114 416.8 345 63.2
THA.LOC104799620 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 1.7e-114 416.8 333 65.2
SalBow6G4624 Salvia bowleyana HOM05D002335 ORTHO05D006282 2.2e-114 416.4 304 71.4
AL6G32120 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 3.8e-114 415.6 346 63.3
AUR62025250 Chenopodium quinoa HOM05D002335 ORTHO05D006282 4.9e-114 415.2 326 66.3
Medtr2g041690 Medicago truncatula HOM05D002335 ORTHO05D006282 6.4e-114 414.8 346 63.6
Carub.0003s2712 Capsella rubella HOM05D002335 ORTHO05D006282 8.4e-114 414.5 349 63.9
AL3G43580 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 2.4e-113 412.9 351 63.5
AT5G20580 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 2.4e-113 412.9 346 63.0
Sp3g24570 Schrenkiella parvula HOM05D002335 ORTHO05D006282 2.4e-113 412.9 352 63.4
Sp6g23900 Schrenkiella parvula HOM05D002335 ORTHO05D006282 2.4e-113 412.9 344 63.4
Carub.0006s1891 Capsella rubella HOM05D002335 ORTHO05D006282 1.2e-112 410.6 346 62.4
C03p11680 Brassica napus HOM05D002335 ORTHO05D006282 1.6e-112 410.2 344 63.1
BraA03t10325Z Brassica rapa HOM05D002335 ORTHO05D006282 3.5e-112 409.1 344 62.8
MD15G1217700 Malus domestica HOM05D002335 ORTHO05D006282 1.1e-110 404.1 318 64.8
SGA_v2.0_scaffold308G48076 Striga asiatica HOM05D002335 ORTHO05D006282 1.9e-110 403.3 371 60.1
PGR044G1875 Punica granatum HOM05D002335 ORTHO05D006282 1.6e-109 400.2 292 71.9
Atru.chr7.1708 Acer truncatum HOM05D002335 ORTHO05D006282 8.4e-106 387.9 278 70.1
Sopen07g021360 Solanum pennellii HOM05D002335 ORTHO05D006282 1.4e-105 387.1 332 62.7
CAN.G1661.12 Capsicum annuum HOM05D002335 ORTHO05D006282 7.9e-104 381.3 346 60.4
Lsat_1_v5_gn_7_35121 Lactuca sativa HOM05D002335 ORTHO05D006692 8.7e-103 377.9 321 61.1
QL11p000781 Quercus lobata HOM05D002335 ORTHO05D006282 2.8e-101 372.9 377 57.0
Prupe.7G198700 Prunus persica HOM05D002335 ORTHO05D006282 3.7e-101 372.5 343 58.6
HPP92_004366 Vanilla planifolia HOM05D002335 ORTHO05D006282 1.8e-100 370.2 340 58.8
BolC3t13639H Brassica oleracea HOM05D005537 ORTHO05D006776 1.5e-99 367.1 297 66.0
vmacro06343 Vaccinium macrocarpon HOM05D002335 ORTHO05D006282 5.9e-99 365.2 409 53.3
CARHR192220 Cardamine hirsuta HOM05D002335 ORTHO05D006282 1.3e-98 364.0 296 65.5
arahy.Tifrunner.gnm1.ann1.UHGN3W Arachis hypogaea HOM05D002335 ORTHO05D006282 3.2e-97 359.4 340 59.4
TWI63G1279 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 3.2e-97 359.4 346 58.4
Nitab4.5_0000073g0170 Nicotiana tabacum HOM05D002335 ORTHO05D006282 4.2e-97 359.0 400 52.2
Psat1g134320 Pisum sativum HOM05D002335 ORTHO05D006282 3.6e-96 355.9 266 71.1
CARHR103630 Cardamine hirsuta HOM05D002335 ORTHO05D006282 1.4e-95 354.0 305 63.9
SEGI_06962 Sequoiadendron giganteum HOM05D002335 ORTHO05D006282 8.8e-95 351.3 346 53.5
Rhsim03G0227400 Rhododendron simsii HOM05D002335 ORTHO05D005129 1.4e-92 344.0 396 53.3
AT2G06005 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 1.8e-92 343.6 291 64.3
Aa31LG1G14100 Aethionema arabicum HOM05D002335 ORTHO05D006282 4.2e-89 332.4 440 46.1
Nitab4.5_0009436g0040 Nicotiana tabacum HOM05D002335 ORTHO05D006282 5.1e-87 325.5 409 49.4
Psat3g025000 Pisum sativum HOM05D002335 ORTHO05D006282 5.1e-87 325.5 248 66.5
SHI23809 Sapria himalayana HOM05D002335 ORTHO05D006282 1.8e-84 317.0 234 68.8
CDE02G0868 Ceratophyllum demersum HOM05D002335 ORTHO05D006282 5.9e-83 312.0 232 69.8
FAN23G1616 Fragaria x ananassa HOM05D002335 ORTHO05D006282 5.0e-82 308.9 243 67.9
Cpa.g.sc28.33 Carica papaya HOM05D002335 ORTHO05D006282 1.4e-81 307.4 229 68.6
Sc18g0002560 Simmondsia chinensis HOM05D002335 ORTHO05D006282 1.4e-79 300.8 244 66.4
Lj7C687T14 Lonicera japonica HOM05D002335 ORTHO05D006282 2.0e-78 297.0 260 62.7
Peaxi162Scf00127g01814 Petunia axillaris HOM05D002335 ORTHO05D006282 1.7e-74 283.9 256 64.5
Mapoly0011s0025 Marchantia polymorpha HOM05D002335 ORTHO05D006282 1.8e-71 273.9 331 46.8
CAN.G404.48 Capsicum annuum HOM05D002335 ORTHO05D006282 8.8e-71 271.6 317 49.8
Pp3c22_13730 Physcomitrium patens HOM05D002335 ORTHO05D006282 2.0e-70 270.4 331 46.8
DCAR_028335 Daucus carota HOM05D002335 ORTHO05D006282 1.9e-65 253.8 191 70.7
Pp3c2_6470 Physcomitrium patens HOM05D002335 ORTHO05D006282 4.4e-62 242.7 347 41.2
Lalb_Chr23g0276371 Lupinus albus HOM05D002335 ORTHO05D006282 2.8e-61 240.0 204 59.8
Lalb_Chr07g0181191 Lupinus albus HOM05D002335 ORTHO05D006282 4.1e-60 236.1 238 52.5
arahy.Tifrunner.gnm1.ann1.3UYF95 Arachis hypogaea HOM05D002335 ORTHO05D006282 1.6e-59 234.2 223 55.2
Lalb_Chr23g0276381 Lupinus albus HOM05D002335 ORTHO05D006282 2.2e-53 213.8 144 80.6
SMO358G0254 Selaginella moellendorffii HOM05D002335 ORTHO05D006282 3.5e-51 206.5 214 54.2
Actinidia38482 Actinidia chinensis HOM05D002335 ORTHO05D006282 6.6e-50 202.2 148 66.2
Lalb_Chr07g0181181 Lupinus albus HOM05D002335 ORTHO05D006282 1.5e-46 191.0 170 64.7
Nitab4.5_0000343g0220 Nicotiana tabacum HOM05D002335 ORTHO05D006282 1.7e-42 177.6 129 67.4
MD02G1091600 Malus domestica HOM05D002335 ORTHO05D006282 2.3e-42 177.2 145 59.3
Cpa.g.sc28.37 Carica papaya HOM05D002335 ORTHO05D006282 3.3e-33 146.7 103 74.8
Actinidia38481 Actinidia chinensis HOM05D002335 ORTHO05D006282 5.6e-33 146.0 125 67.2
AagrBONN_evm.TU.Sc2ySwM_344.5493 Anthoceros agrestis HOM05D002335 ORTHO05D006282 2.8e-32 143.7 329 31.6
Nitab4.5_0000343g0210 Nicotiana tabacum HOM05D002335 ORTHO05D006282 1.4e-31 141.4 98 74.5
CBR_g26318 Chara braunii HOM05D002335 ORTHO05D006282 5.2e-23 112.8 224 33.9
Solyc07g041890.1 Solanum lycopersicum HOM05D002335 ORTHO05D006282 8.9e-23 112.1 182 44.5
Ah.14g084930 Amaranthus hybridus HOM05D002335 ORTHO05D006282 5.8e-22 109.4 77 71.4
Oeu011491.2 Olea europaea HOM05D002335 ORTHO05D006282 2.7e-19 100.5 78 61.5
Medtr2g041390 Medicago truncatula HOM05D002335 ORTHO05D006282 6.0e-19 99.4 102 56.9
PSO210G7126 Papaver somniferum HOM05D002335 ORTHO05D006282 3.0e-18 97.1 70 77.1
arahy.Tifrunner.gnm1.ann1.HK8DFN Arachis hypogaea HOM05D002335 ORTHO05D006282 7.3e-17 92.4 99 48.5
Psat6g064600 Pisum sativum HOM05D004726 ORTHO05D005986 4.9e-13 79.7 53 77.4
Cpa.g.c47777 Carica papaya HOM05D002335 ORTHO05D006282 1.9e-12 77.8 52 69.2
PGSC0003DMG400019032 Solanum tuberosum HOM05D002335 ORTHO05D006282 4.2e-12 76.6 57 66.7
arahy.Tifrunner.gnm1.ann1.S4WZ34 Arachis hypogaea HOM05D000237 ORTHO05D017465 2.5e-09 67.4 57 50.9
Oeu031390.1 Olea europaea HOM05D002335 ORTHO05D006282 1.6e-08 64.7 50 60.0
arahy.Tifrunner.gnm1.ann1.Y6L4BT Arachis hypogaea HOM05D000237 ORTHO05D017465 1.4e-07 61.6 72 41.7
arahy.Tifrunner.gnm1.ann1.WCUD5S Arachis hypogaea HOM05D000237 ORTHO05D017465 3.1e-07 60.5 56 48.2
CAN.G2458.1 Capsicum annuum HOM05D002335 ORTHO05D006282 1.2e-06 58.5 74 48.6


User provided reference genes

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