Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO724G0052 Papaver somniferum HOM05D004113 ORTHO05D005233 1.7e-91 339.3 179 100.0
PSO724G0234 Papaver somniferum HOM05D004113 ORTHO05D005233 1.7e-91 339.3 179 100.0
PSO017G2443 Papaver somniferum HOM05D004113 ORTHO05D005233 6.7e-67 257.7 179 79.3
PSO837G0066 Papaver somniferum HOM05D004113 ORTHO05D005233 1.1e-66 256.9 179 79.9
PSO837G0029 Papaver somniferum HOM05D004113 ORTHO05D005233 1.7e-30 136.7 155 49.0
PSO017G1826 Papaver somniferum HOM05D004113 ORTHO05D005233 1.2e-28 130.6 177 46.9
PSO339G1590 Papaver somniferum HOM05D004113 ORTHO05D005233 1.1e-26 124.0 178 44.4
PSO384G1499 Papaver somniferum HOM05D004113 ORTHO05D005233 1.7e-25 120.2 176 44.9
PSO339G2774 Papaver somniferum HOM05D004113 ORTHO05D005233 2.2e-22 109.8 140 43.6
PSO837G0030 Papaver somniferum HOM05D004113 ORTHO05D005233 1.2e-20 104.0 178 39.9
PSO017G6365 Papaver somniferum HOM05D004113 ORTHO05D005233 2.6e-18 96.3 175 38.9
TAR628G0877 Trochodendron aralioides HOM05D004113 ORTHO05D005233 1.3e-17 94.0 178 36.0
Nn5g28620 Nelumbo nucifera HOM05D004113 ORTHO05D005233 3.1e-16 89.4 179 33.0
Duzib147G1472 Durio zibethinus HOM05D004113 ORTHO05D005233 9.1e-16 87.8 171 35.1
PSO782G3380 Papaver somniferum HOM05D004113 ORTHO05D005233 2.7e-15 86.3 151 29.8
RhsimUnG0017500 Rhododendron simsii HOM05D004113 ORTHO05D005233 3.5e-15 85.9 157 32.5
EL10Ac1g01806 Beta vulgaris HOM05D004113 ORTHO05D005233 7.7e-15 84.7 169 31.4
PSO063G6208 Papaver somniferum HOM05D004113 ORTHO05D005233 7.7e-15 84.7 151 29.1
Thecc.01G128300 Theobroma cacao HOM05D004113 ORTHO05D005233 7.7e-15 84.7 166 33.1
Ciclev10002604m.g Citrus clementina HOM05D004113 ORTHO05D005233 2.2e-14 83.2 170 32.4
CiPaw.03G129200 Carya illinoinensis HOM05D004113 ORTHO05D005233 3.8e-14 82.4 181 31.5
Prupe.6G197400 Prunus persica HOM05D004113 ORTHO05D005233 3.8e-14 82.4 170 32.9
HanXRQChr08g0218241 Helianthus annuus HOM05D004113 ORTHO05D005233 6.5e-14 81.6 158 34.2
RhsimUnG0133000 Rhododendron simsii HOM05D004113 ORTHO05D005233 8.5e-14 81.3 163 31.3
Gorai.011G116700 Gossypium raimondii HOM05D004113 ORTHO05D005233 1.1e-13 80.9 171 33.3
MD01G1038300 Malus domestica HOM05D004113 ORTHO05D005233 1.5e-13 80.5 158 32.3
Cpa.g.sc42.138 Carica papaya HOM05D004113 ORTHO05D005233 1.9e-13 80.1 182 31.3
Lsat_1_v5_gn_8_17501 Lactuca sativa HOM05D004113 ORTHO05D005233 1.9e-13 80.1 153 33.3
Dinv06063 Davidia involucrata HOM05D004113 ORTHO05D005233 3.2e-13 79.3 157 30.6
PSO339G0814 Papaver somniferum HOM05D004113 ORTHO05D005233 5.5e-13 78.6 178 34.3
Gohir.D10G106500 Gossypium hirsutum HOM05D004113 ORTHO05D005233 9.4e-13 77.8 167 33.5
Sed0024266 Sechium edule HOM05D004113 ORTHO05D005233 9.4e-13 77.8 161 31.1
HanXRQChr12g0368871 Helianthus annuus HOM05D004113 ORTHO05D005233 1.2e-12 77.4 171 34.5
Lalb_Chr00c34g0408621 Lupinus albus HOM05D004113 ORTHO05D005233 1.2e-12 77.4 174 31.0
Lalb_Chr12g0203181 Lupinus albus HOM05D004113 ORTHO05D005233 1.2e-12 77.4 174 31.0
CANSAT01G1731 Cannabis sativa HOM05D004113 ORTHO05D005233 1.6e-12 77.0 171 31.0
CANSAT01G2965 Cannabis sativa HOM05D004113 ORTHO05D005233 1.6e-12 77.0 171 31.0
Oeu004248.1 Olea europaea HOM05D004113 ORTHO05D005233 1.6e-12 77.0 172 29.1
DCAR_001364 Daucus carota HOM05D004113 ORTHO05D005233 2.1e-12 76.6 176 33.5
Hma1.2p1_0528F.1_g173060 Hydrangea macrophylla HOM05D004113 ORTHO05D005233 3.6e-12 75.9 171 31.6
QL06p029175 Quercus lobata HOM05D004113 ORTHO05D005233 6.1e-12 75.1 148 31.8
Gohir.A11G230200 Gossypium hirsutum HOM05D004113 ORTHO05D005233 1.0e-11 74.3 165 30.3
Gorai.003G067200 Gossypium raimondii HOM05D004113 ORTHO05D005233 1.0e-11 74.3 168 30.4
Sc01g0006950 Simmondsia chinensis HOM05D004113 ORTHO05D005233 1.0e-11 74.3 155 32.9
Oeu047690.1 Olea europaea HOM05D004113 ORTHO05D005233 1.4e-11 73.9 168 29.2
Gohir.D11G230300 Gossypium hirsutum HOM05D004113 ORTHO05D005233 1.8e-11 73.6 169 31.4
FvH4_2g14700 Fragaria vesca HOM05D004113 ORTHO05D005233 1.2e-10 70.9 152 28.9
Peaxi162Scf00589g00001 Petunia axillaris HOM05D004113 ORTHO05D005233 1.5e-10 70.5 180 32.2
PGSC0003DMG400028678 Solanum tuberosum HOM05D004113 ORTHO05D005233 3.4e-10 69.3 173 32.4
Sopen11g001780 Solanum pennellii HOM05D004113 ORTHO05D005233 5.7e-10 68.6 175 34.3
TAR636G0184 Trochodendron aralioides HOM05D004113 ORTHO05D005233 5.7e-10 68.6 184 32.1
Ciclev10003542m.g Citrus clementina HOM05D001578 ORTHO05D001207 9.8e-10 67.8 148 31.8
Ciclev10004017m.g Citrus clementina HOM05D001578 ORTHO05D001207 9.8e-10 67.8 152 32.2
Solyc11g005820.1 Solanum lycopersicum HOM05D004113 ORTHO05D005233 9.8e-10 67.8 176 32.4
TWI75G0632 Tripterygium wilfordii HOM05D004113 ORTHO05D005233 1.7e-09 67.0 173 26.0
TAR633G1609 Trochodendron aralioides HOM05D004113 ORTHO05D005233 2.8e-09 66.2 188 31.9
TAR636G1790 Trochodendron aralioides HOM05D004113 ORTHO05D005233 3.7e-09 65.9 181 31.5
Ciclev10002621m.g Citrus clementina HOM05D001578 ORTHO05D001207 4.9e-09 65.5 177 32.2
Duzib052G1048 Durio zibethinus HOM05D001578 ORTHO05D001207 6.3e-09 65.1 150 32.7
Atru.chr6.1289 Acer truncatum HOM05D004113 ORTHO05D001207 1.4e-08 63.9 155 31.0
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 1.4e-08 63.9 149 30.9
TAR376G0892 Trochodendron aralioides HOM05D035460 ORTHO05D026107 1.8e-08 63.5 182 29.7
CAN.G1163.3 Capsicum annuum HOM05D004113 ORTHO05D005233 2.4e-08 63.2 173 31.2
COL.COLO4_34581 Corchorus olitorius HOM05D001578 ORTHO05D001207 2.4e-08 63.2 172 32.0
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 2.4e-08 63.2 143 29.4
PGR004G2339 Punica granatum HOM05D001578 ORTHO05D001207 3.1e-08 62.8 173 34.7
Eucgr.H04067 Eucalyptus grandis HOM05D001578 ORTHO05D001207 4.1e-08 62.4 150 33.3
Lalb_Chr07g0181951 Lupinus albus HOM05D001578 ORTHO05D001207 4.1e-08 62.4 153 31.4
Psat0s740g0040 Pisum sativum HOM05D001578 ORTHO05D001207 4.1e-08 62.4 152 32.2
Psat1g162120 Pisum sativum HOM05D001578 ORTHO05D001207 4.1e-08 62.4 154 33.1
TAR636G3366 Trochodendron aralioides HOM05D004113 ORTHO05D005233 7.0e-08 61.6 184 31.0
BcaC09g48672 Brassica carinata HOM05D009524 ORTHO05D001207 9.1e-08 61.2 165 26.7
A01p37140 Brassica napus HOM05D009524 ORTHO05D001207 9.1e-08 61.2 165 26.7
C01p47080 Brassica napus HOM05D009524 ORTHO05D001207 9.1e-08 61.2 165 26.7
BraA01t03775Z Brassica rapa HOM05D009524 ORTHO05D001207 9.1e-08 61.2 165 26.7
CARHR287460 Cardamine hirsuta HOM05D004113 ORTHO05D005233 9.1e-08 61.2 174 28.2
Duzib151G1057 Durio zibethinus HOM05D001578 ORTHO05D001207 1.2e-07 60.8 170 31.8
Glyma.17G036100 Glycine max HOM05D001578 ORTHO05D001207 1.2e-07 60.8 154 31.2
Lj6g0003953 Lotus japonicus HOM05D001578 ORTHO05D001207 1.2e-07 60.8 95 42.1
Potri.010G209800 Populus trichocarpa HOM05D004113 ORTHO05D005233 1.2e-07 60.8 172 30.8
BolC1t04674H Brassica oleracea HOM05D009524 ORTHO05D001207 1.6e-07 60.5 173 28.3
TAR365G0682 Trochodendron aralioides HOM05D001578 ORTHO05D001207 1.6e-07 60.5 172 30.8
VMungo1215G0592 Vigna mungo HOM05D001578 ORTHO05D001207 1.6e-07 60.5 153 31.4
Carub.0003s1687 Capsella rubella HOM05D001578 ORTHO05D001207 2.0e-07 60.1 169 31.4
Cpa.g.sc9.24 Carica papaya HOM05D001578 ORTHO05D001207 2.7e-07 59.7 191 31.9
Ciclev10006032m.g Citrus clementina HOM05D001578 ORTHO05D001207 2.7e-07 59.7 142 32.4
Gohir.A01G035200 Gossypium hirsutum HOM05D001578 ORTHO05D001207 2.7e-07 59.7 167 31.7
Gohir.D01G023565 Gossypium hirsutum HOM05D001578 ORTHO05D001207 2.7e-07 59.7 167 31.7
Gorai.002G031100 Gossypium raimondii HOM05D001578 ORTHO05D001207 2.7e-07 59.7 167 31.7
Nitab4.5_0010452g0030 Nicotiana tabacum HOM05D003146 ORTHO05D001819 2.7e-07 59.7 163 31.9
vmacro07979 Vaccinium macrocarpon HOM05D003146 ORTHO05D001819 2.7e-07 59.7 137 29.2
Glyma.07G237500 Glycine max HOM05D001578 ORTHO05D001207 3.5e-07 59.3 170 31.2
TPR.G33864 Trifolium pratense HOM05D001578 ORTHO05D001207 3.5e-07 59.3 171 30.4
Lalb_Chr12g0200791 Lupinus albus HOM05D001578 ORTHO05D001207 4.5e-07 58.9 151 30.5
Lalb_Chr15g0089101 Lupinus albus HOM05D001578 ORTHO05D001207 4.5e-07 58.9 166 31.3
Sabra10G0162100 Salix brachista HOM05D004113 ORTHO05D005233 4.5e-07 58.9 136 33.1
VMungo0540G0744 Vigna mungo HOM05D001578 ORTHO05D001207 4.5e-07 58.9 176 30.7
Medtr2g033630 Medicago truncatula HOM05D001578 ORTHO05D001207 7.7e-07 58.2 175 30.9
BcaB04g20858 Brassica carinata HOM05D009524 ORTHO05D001207 1.0e-06 57.8 162 25.9
BcaB06g25805 Brassica carinata HOM05D001578 ORTHO05D001207 1.0e-06 57.8 169 30.8
BraA03t10043Z Brassica rapa HOM05D009524 ORTHO05D001207 1.0e-06 57.8 163 27.0
CsaV3_4G000950 Cucumis sativus L. HOM05D003556 ORTHO05D003404 1.0e-06 57.8 150 29.3
AT3G17130 Arabidopsis thaliana HOM05D001578 ORTHO05D001207 1.3e-06 57.4 167 30.5
arahy.Tifrunner.gnm1.ann1.2R90TF Arachis hypogaea HOM05D000961 ORTHO05D001207 1.3e-06 57.4 172 27.9
Duzib133G0465 Durio zibethinus HOM05D003556 ORTHO05D003404 1.3e-06 57.4 124 33.9
AL3G30110 Arabidopsis lyrata HOM05D001578 ORTHO05D001207 1.7e-06 57.0 169 30.2
A03p07210 Brassica napus HOM05D009524 ORTHO05D001207 1.7e-06 57.0 163 27.0
COL.COLO4_34578 Corchorus olitorius HOM05D001578 ORTHO05D001207 1.7e-06 57.0 149 34.2
Phvul.003G116900 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 1.7e-06 57.0 150 30.0
TAR627G1097 Trochodendron aralioides HOM05D004113 ORTHO05D005233 1.7e-06 57.0 137 35.0
Duzib151G0004 Durio zibethinus HOM05D001578 ORTHO05D001207 2.3e-06 56.6 150 32.0
Manes.03G207000 Manihot esculenta HOM05D001578 ORTHO05D001207 2.3e-06 56.6 173 31.2
Rhsim04G0244100 Rhododendron simsii HOM05D003146 ORTHO05D001819 2.3e-06 56.6 137 29.2
CAN.G338.39 Capsicum annuum HOM05D003146 ORTHO05D001819 2.9e-06 56.2 171 28.1
TAR365G0500 Trochodendron aralioides HOM05D001578 ORTHO05D001207 2.9e-06 56.2 160 30.6
C03p08210 Brassica napus HOM05D009524 ORTHO05D001207 3.8e-06 55.8 163 25.8
Ciclev10006511m.g Citrus clementina HOM05D001578 ORTHO05D001207 3.8e-06 55.8 156 28.8
Gohir.A05G275500 Gossypium hirsutum HOM05D001578 ORTHO05D001207 3.8e-06 55.8 131 30.5
TWI75G0074 Tripterygium wilfordii HOM05D001578 ORTHO05D001207 3.8e-06 55.8 155 27.7
Actinidia21379 Actinidia chinensis HOM05D001578 ORTHO05D001207 5.0e-06 55.5 142 32.4
Phvul.006G119800 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 5.0e-06 55.5 105 36.2
PGR119G1148 Punica granatum HOM05D003556 ORTHO05D003404 5.0e-06 55.5 152 30.3
Rhsim03G0038200 Rhododendron simsii HOM05D001578 ORTHO05D001207 5.0e-06 55.5 171 31.6
BolC3t13318H Brassica oleracea HOM05D009524 ORTHO05D001207 6.6e-06 55.1 163 26.4
Gohir.D05G277600 Gossypium hirsutum HOM05D001578 ORTHO05D001207 6.6e-06 55.1 131 30.5
Rhsim13G0002900 Rhododendron simsii HOM05D001578 ORTHO05D001207 6.6e-06 55.1 174 29.3
TAR365G1026 Trochodendron aralioides HOM05D001578 ORTHO05D001207 6.6e-06 55.1 158 29.7
A05p32610 Brassica napus HOM05D001578 ORTHO05D001207 8.6e-06 54.7 169 30.2
BraA05t22085Z Brassica rapa HOM05D001578 ORTHO05D001207 8.6e-06 54.7 169 30.2
MELO3C017944.2 Cucumis melo HOM05D003556 ORTHO05D003404 8.6e-06 54.7 146 28.8
Sed0018956 Sechium edule HOM05D003556 ORTHO05D003404 8.6e-06 54.7 174 29.9


User provided reference genes

Program Settings