Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO717G0098 Papaver somniferum HOM05D006859 ORTHO05D007990 7.5e-162 573.9 320 100.0
PSO675G5712 Papaver somniferum HOM05D006859 ORTHO05D007990 3.3e-149 531.9 320 93.4
TAR636G0545 Trochodendron aralioides HOM05D006859 ORTHO05D007990 1.4e-86 323.9 307 64.8
Aqoxy7G00861 Aquilegia oxysepala HOM05D006859 ORTHO05D007990 3.4e-82 309.3 302 60.3
Nn1g00823 Nelumbo nucifera HOM05D006859 ORTHO05D007990 2.2e-81 306.6 300 62.0
Dinv28858 Davidia involucrata HOM05D006859 ORTHO05D007990 1.4e-78 297.4 311 59.8
QL12p009356 Quercus lobata HOM05D006859 ORTHO05D007990 2.3e-78 296.6 331 55.9
Prupe.5G059200 Prunus persica HOM05D006859 ORTHO05D007990 3.9e-78 295.8 316 55.4
Duzib205G1414 Durio zibethinus HOM05D006859 ORTHO05D007990 2.0e-77 293.5 317 57.4
CSS0046225 Camellia sinensis var. sinensis HOM05D006859 ORTHO05D007990 6.3e-76 288.5 304 58.6
FvH4_5g20140 Fragaria vesca HOM05D006859 ORTHO05D007990 1.4e-75 287.3 300 58.0
FAN08G0582 Fragaria x ananassa HOM05D006859 ORTHO05D007990 1.2e-74 284.3 301 58.1
Potri.003G082200 Populus trichocarpa HOM05D006859 ORTHO05D007990 3.5e-74 282.7 312 56.7
MBI04_g28364_MAGBIO Magnolia biondii HOM05D006859 ORTHO05D007990 5.9e-74 282.0 295 61.4
TWI15G0070 Tripterygium wilfordii HOM05D006859 ORTHO05D007990 5.9e-74 282.0 293 57.3
Atru.chr9.1231 Acer truncatum HOM05D006859 ORTHO05D007990 1.3e-73 280.8 312 57.4
Duzib068G0861 Durio zibethinus HOM05D006859 ORTHO05D007990 1.7e-73 280.4 313 55.3
FAN18G2706 Fragaria x ananassa HOM05D006859 ORTHO05D007990 2.9e-73 279.6 301 57.5
MD00G1165000 Malus domestica HOM05D006859 ORTHO05D007990 2.9e-73 279.6 313 57.5
RcHm_v2.0_Chr7g0205091 Rosa chinensis HOM05D006859 ORTHO05D007990 2.9e-73 279.6 296 58.1
Gorai.004G193900 Gossypium raimondii HOM05D006859 ORTHO05D007990 1.1e-72 277.7 318 56.0
Cc08_g11510 Coffea canephora HOM05D006859 ORTHO05D007990 1.9e-72 276.9 310 56.1
Gohir.D08G184600 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.9e-72 276.9 318 56.0
Lj2g0014108 Lotus japonicus HOM05D006859 ORTHO05D007990 7.2e-72 275.0 311 54.7
PGR031G1874 Punica granatum HOM05D006859 ORTHO05D007990 1.6e-71 273.9 303 56.1
Medtr5g013280 Medicago truncatula HOM05D006859 ORTHO05D007990 3.6e-71 272.7 288 58.3
Sabra03G0053000 Salix brachista HOM05D006859 ORTHO05D007990 6.1e-71 271.9 312 54.5
TPR.G31422 Trifolium pratense HOM05D006859 ORTHO05D007990 6.1e-71 271.9 290 57.9
Oeu017213.1 Olea europaea HOM05D006859 ORTHO05D007990 1.0e-70 271.2 291 59.1
Phvul.002G001000 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 6.7e-70 268.5 295 54.9
Gohir.A08G165800 Gossypium hirsutum HOM05D006859 ORTHO05D007990 8.8e-70 268.1 313 55.3
FAN04G1798 Fragaria x ananassa HOM05D006859 ORTHO05D007990 7.5e-69 265.0 298 56.4
Eucgr.D02124 Eucalyptus grandis HOM05D006859 ORTHO05D007990 4.8e-68 262.3 305 53.1
Hund11327 Selenicereus undatus HOM05D006859 ORTHO05D007990 6.3e-68 261.9 311 53.1
Manes.01G086700 Manihot esculenta HOM05D006859 ORTHO05D007990 2.4e-67 260.0 304 55.3
MD04G1050900 Malus domestica HOM05D006859 ORTHO05D007990 3.1e-67 259.6 300 55.7
RhsimUnG0092900 Rhododendron simsii HOM05D006859 ORTHO05D007990 3.1e-67 259.6 291 56.7
vmacro00041 Vaccinium macrocarpon HOM05D006859 ORTHO05D007990 5.3e-67 258.8 298 55.4
Actinidia25901 Actinidia chinensis HOM05D006859 ORTHO05D007990 7.0e-67 258.5 290 57.2
CANSAT21G2559 Cannabis sativa HOM05D006859 ORTHO05D007990 9.1e-67 258.1 315 52.4
VMungo1215G2710 Vigna mungo HOM05D006859 ORTHO05D007990 1.3e-65 254.2 301 54.2
Ciclev10021440m.g Citrus clementina HOM05D006859 ORTHO05D007990 2.2e-65 253.4 292 53.1
Migut.A01048 Erythranthe guttata HOM05D006859 ORTHO05D007990 1.9e-64 250.4 302 55.0
Lalb_Chr16g0379391 Lupinus albus HOM05D006859 ORTHO05D007990 9.4e-64 248.1 304 52.3
CiPaw.11G069300 Carya illinoinensis HOM05D006859 ORTHO05D007990 2.1e-63 246.9 257 57.2
PGSC0003DMG400024153 Solanum tuberosum HOM05D006859 ORTHO05D007990 8.0e-63 245.0 323 52.6
EL10Ac5g12291 Beta vulgaris HOM05D006859 ORTHO05D007990 1.0e-62 244.6 315 51.4
Cpa.g.sc89.10 Carica papaya HOM05D006859 ORTHO05D007990 6.8e-62 241.9 292 53.1
HanXRQChr06g0164541 Helianthus annuus HOM05D006859 ORTHO05D007990 1.2e-61 241.1 291 52.6
MELO3C003330.2 Cucumis melo HOM05D006859 ORTHO05D007990 3.4e-61 239.6 294 51.0
Sopen06g021040 Solanum pennellii HOM05D006859 ORTHO05D007990 4.4e-61 239.2 303 52.5
Psat2g176200 Pisum sativum HOM05D006859 ORTHO05D007990 4.8e-60 235.7 269 56.5
Os10g0563400 Oryza sativa ssp. japonica HOM05D006859 ORTHO05D007990 4.1e-59 232.6 306 51.0
Glyma.01G205600 Glycine max HOM05D006859 ORTHO05D007990 5.4e-59 232.3 295 50.8
ATR0665G206 Amborella trichopoda HOM05D006859 ORTHO05D007990 9.1e-59 231.5 292 53.8
Lj2C227G12 Lonicera japonica HOM05D006859 ORTHO05D007990 9.1e-59 231.5 254 57.9
Nitab4.5_0000506g0100 Nicotiana tabacum HOM05D006859 ORTHO05D007990 2.9e-57 226.5 306 51.3
Nitab4.5_0003456g0040 Nicotiana tabacum HOM05D006859 ORTHO05D007990 3.8e-57 226.1 328 50.6
arahy.Tifrunner.gnm1.ann1.B2NILF Arachis hypogaea HOM05D006859 ORTHO05D007990 1.5e-56 224.2 335 49.3
arahy.Tifrunner.gnm1.ann1.WYE05V Arachis hypogaea HOM05D006859 ORTHO05D007990 1.5e-56 224.2 335 49.3
ECA236G3610 Erigeron canadensis HOM05D006859 ORTHO05D007990 2.1e-55 220.3 271 53.5
Actinidia02186 Actinidia chinensis HOM05D006859 ORTHO05D007990 8.0e-55 218.4 293 51.5
Gohir.D03G167400 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.0e-54 218.0 270 52.6
Cfa012667 Carpinus fangiana HOM05D006859 ORTHO05D007990 1.8e-54 217.2 290 51.7
HPP92_014892 Vanilla planifolia HOM05D006859 ORTHO05D007990 6.8e-54 215.3 294 50.3
Zm00001eb391020 Zea mays HOM05D006859 ORTHO05D007990 1.5e-53 214.2 296 50.0
Gorai.003G177100 Gossypium raimondii HOM05D006859 ORTHO05D007990 1.8e-51 207.2 264 49.6
Solyc06g060890.4 Solanum lycopersicum HOM05D006859 ORTHO05D007990 1.8e-51 207.2 258 51.9
CARHR224240 Cardamine hirsuta HOM05D006859 ORTHO05D007990 1.2e-50 204.5 293 48.1
Sp7g16620 Schrenkiella parvula HOM05D006859 ORTHO05D007990 1.2e-50 204.5 293 47.8
Carub.0007s2385 Capsella rubella HOM05D006859 ORTHO05D007990 1.6e-50 204.1 295 47.5
Sc01g0008110 Simmondsia chinensis HOM05D006859 ORTHO05D007990 3.5e-50 203.0 249 54.6
AT4G17540 Arabidopsis thaliana HOM05D006859 ORTHO05D007990 4.5e-50 202.6 297 46.5
BcaC09g51632 Brassica carinata HOM05D006859 ORTHO05D007990 4.5e-50 202.6 294 49.0
Lsat_1_v5_gn_1_53480 Lactuca sativa HOM05D006859 ORTHO05D007990 7.8e-50 201.8 292 47.3
CsaV3_3G049860 Cucumis sativus L. HOM05D006859 ORTHO05D007990 1.0e-49 201.4 295 47.1
A01p09620 Brassica napus HOM05D006859 ORTHO05D007990 1.3e-49 201.1 297 48.1
Gohir.A03G005200 Gossypium hirsutum HOM05D006859 ORTHO05D007990 2.3e-49 200.3 262 50.4
BcaNung00082 Brassica carinata HOM05D006859 ORTHO05D007990 2.9e-49 199.9 296 46.6
BraA01t00904Z Brassica rapa HOM05D006859 ORTHO05D007990 3.8e-49 199.5 297 47.8
C01p11190 Brassica napus HOM05D006859 ORTHO05D007990 8.6e-49 198.4 295 49.2
BolC1t01085H Brassica oleracea HOM05D006859 ORTHO05D007990 1.5e-48 197.6 295 48.8
Thecc.03G243500 Theobroma cacao HOM05D006859 ORTHO05D007990 1.9e-48 197.2 236 54.2
Thhalv10025654m.g Eutrema salsugineum HOM05D006859 ORTHO05D007990 2.5e-48 196.8 294 46.6
DCAR_004596 Daucus carota HOM05D006859 ORTHO05D007990 1.3e-44 184.5 263 48.3
unitig_8.g3018 Utricularia gibba HOM05D000481 ORTHO05D007990 2.2e-44 183.7 284 48.2
PSO717G0090 Papaver somniferum HOM05D006859 ORTHO05D007990 3.7e-44 183.0 276 49.6
CDE11G0841 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 3.2e-43 179.9 218 56.9
AUR62018861 Chenopodium quinoa HOM05D006859 ORTHO05D007990 5.0e-41 172.6 226 50.0
Ca_24604_v3 Cicer arietinum L. HOM05D006859 ORTHO05D007990 6.6e-41 172.2 300 42.3
THA.LOC104798356 Tarenaya hassleriana HOM05D006859 ORTHO05D007990 6.6e-41 172.2 321 43.6
Glyma.11G037300 Glycine max HOM05D006859 ORTHO05D007990 5.2e-38 162.5 233 41.6
SalBow6G1554 Salvia bowleyana HOM05D006859 ORTHO05D007990 5.2e-38 162.5 242 50.4
ClCG09G012800 Citrullus lanatus HOM05D006859 ORTHO05D007990 7.5e-37 158.7 276 42.0
Hma1.2p1_0840F.1_g226470 Hydrangea macrophylla HOM05D006859 ORTHO05D007990 1.1e-35 154.8 273 40.3
AL7G37080 Arabidopsis lyrata HOM05D006859 ORTHO05D007990 3.2e-35 153.3 253 43.9
CAN.G62.4 Capsicum annuum HOM05D006859 ORTHO05D007990 4.1e-35 152.9 208 46.6
Peaxi162Scf00190g00099 Petunia axillaris HOM05D006859 ORTHO05D007990 2.0e-34 150.6 217 45.2
SGA_v2.0_scaffold199G41240 Striga asiatica HOM05D006859 ORTHO05D007990 1.3e-33 147.9 272 43.0
Oeu040677.2 Olea europaea HOM05D006859 ORTHO05D007990 2.8e-31 140.2 192 44.3
Aa31LG6G280 Aethionema arabicum HOM05D006859 ORTHO05D007990 2.3e-30 137.1 265 41.5
AUR62007150 Chenopodium quinoa HOM05D006859 ORTHO05D007990 1.2e-29 134.8 220 44.1
DCAR_008336 Daucus carota HOM05D002294 ORTHO05D002367 1.3e-28 131.3 264 36.4
Sed0000052 Sechium edule HOM05D006859 ORTHO05D007990 3.2e-27 126.7 190 43.2
GSVIVG01007347001 Vitis vinifera HOM05D006859 ORTHO05D007990 1.7e-25 120.9 78 78.2
AagrBONN_evm.TU.Sc2ySwM_228.2564 Anthoceros agrestis HOM05D006859 ORTHO05D007990 6.0e-18 95.9 306 35.6
Ah.07g199030 Amaranthus hybridus HOM05D006859 ORTHO05D007990 8.7e-17 92.0 87 66.7
VMungo1215G2895 Vigna mungo HOM05D006859 ORTHO05D007990 9.6e-16 88.6 237 32.9
Pp3c27_6080 Physcomitrium patens HOM05D006859 ORTHO05D007990 2.1e-15 87.4 297 34.7
GSVIVG01007348001 Vitis vinifera HOM05D006859 ORTHO05D007990 1.8e-14 84.3 127 39.4
Phvul.002G001100 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 9.0e-14 82.0 251 31.9
Mapoly0075s0082 Marchantia polymorpha HOM05D006859 ORTHO05D007990 2.0e-13 80.9 113 54.0
Glyma.11G037400 Glycine max HOM05D006859 ORTHO05D007990 9.9e-13 78.6 285 28.4
HPP92_014890 Vanilla planifolia HOM05D006859 ORTHO05D007990 2.2e-12 77.4 75 54.7
CDE11G0285 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 2.9e-12 77.0 106 54.7
CBR_g52283 Chara braunii HOM05D006859 ORTHO05D007990 4.9e-12 76.3 320 31.9
COL.COLO4_21682 Corchorus olitorius HOM05D006859 ORTHO05D007990 9.3e-11 72.0 150 38.0
Glyma.01G205500 Glycine max HOM05D006859 ORTHO05D007990 6.0e-10 69.3 223 32.7
SMO144G0205 Selaginella moellendorffii HOM05D003289 ORTHO05D004594 6.9e-06 55.8 295 27.1


User provided reference genes

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