Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO717G0064 Papaver somniferum HOM05D002799 ORTHO05D008889 1.3e-121 439.9 241 100.0
PSO675G5486 Papaver somniferum HOM05D002799 ORTHO05D008889 2.8e-100 369.0 243 86.8
PSO675G4133 Papaver somniferum HOM05D002799 ORTHO05D008889 9.6e-61 237.7 153 81.0
RcHm_v2.0_Chr1g0383841 Rosa chinensis HOM05D002799 ORTHO05D008889 1.2e-50 204.1 191 59.7
Manes.08G164500 Manihot esculenta HOM05D002799 ORTHO05D008889 1.5e-50 203.8 188 58.5
Nn1g02011 Nelumbo nucifera HOM05D002799 ORTHO05D008889 2.6e-50 203.0 192 58.3
TAR629G0193 Trochodendron aralioides HOM05D002799 ORTHO05D008889 4.5e-50 202.2 192 57.3
Eucgr.K03383 Eucalyptus grandis HOM05D002799 ORTHO05D008889 1.0e-49 201.1 192 57.3
Dinv29173 Davidia involucrata HOM05D002799 ORTHO05D008889 2.2e-49 199.9 192 58.9
CiPaw.05G237000 Carya illinoinensis HOM05D002799 ORTHO05D008889 2.9e-49 199.5 194 57.2
CANSAT21G1155 Cannabis sativa HOM05D002799 ORTHO05D008889 4.9e-49 198.7 189 56.6
Haze_00591 Corylus avellana HOM05D002799 ORTHO05D008889 6.5e-49 198.4 192 58.3
MELO3C005426.2 Cucumis melo HOM05D002799 ORTHO05D008889 6.5e-49 198.4 194 55.2
Prupe.2G323800 Prunus persica HOM05D002799 ORTHO05D008889 1.9e-48 196.8 192 56.8
Sabra19G0057600 Salix brachista HOM05D002799 ORTHO05D008889 1.9e-48 196.8 190 56.8
Potri.019G048200 Populus trichocarpa HOM05D002799 ORTHO05D008889 2.5e-48 196.4 190 57.4
CSS0012005 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 3.2e-48 196.1 191 56.5
CSS0036576 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 3.2e-48 196.1 191 56.5
FvH4_7g33591 Fragaria vesca HOM05D002799 ORTHO05D008889 3.2e-48 196.1 195 55.9
MD07G1305700 Malus domestica HOM05D002799 ORTHO05D008889 3.2e-48 196.1 192 57.3
Rhsim03G0220500 Rhododendron simsii HOM05D000526 ORTHO05D000956 4.2e-48 195.7 191 55.5
FvH4_7g33580 Fragaria vesca HOM05D002799 ORTHO05D008889 5.5e-48 195.3 195 55.9
FAN10G0267 Fragaria x ananassa HOM05D002799 ORTHO05D007076 5.5e-48 195.3 195 56.4
Sed0001745 Sechium edule HOM05D002799 ORTHO05D008889 5.5e-48 195.3 194 57.2
arahy.Tifrunner.gnm1.ann1.31RF02 Arachis hypogaea HOM05D002799 ORTHO05D008889 1.6e-47 193.7 187 55.1
Ciclev10032834m.g Citrus clementina HOM05D002799 ORTHO05D008889 2.1e-47 193.4 192 57.8
FAN03G1078 Fragaria x ananassa HOM05D002799 ORTHO05D007076 2.1e-47 193.4 195 55.9
FAN01G1859 Fragaria x ananassa HOM05D002799 ORTHO05D007076 2.7e-47 193.0 195 55.9
arahy.Tifrunner.gnm1.ann1.10QB4Z Arachis hypogaea HOM05D002799 ORTHO05D008889 3.5e-47 192.6 187 55.6
CsaV3_5G005340 Cucumis sativus L. HOM05D002799 ORTHO05D008889 6.0e-47 191.8 192 55.7
arahy.Tifrunner.gnm1.ann1.LMI616 Arachis hypogaea HOM05D002799 ORTHO05D008889 1.0e-46 191.0 187 55.1
arahy.Tifrunner.gnm1.ann1.B4EAVD Arachis hypogaea HOM05D002799 ORTHO05D008889 1.3e-46 190.7 187 55.1
Cc05_g12950 Coffea canephora HOM05D002799 ORTHO05D008889 1.3e-46 190.7 186 55.9
DCAR_010548 Daucus carota HOM05D002799 ORTHO05D008889 1.8e-46 190.3 197 54.8
ECA236G2689 Erigeron canadensis HOM05D002799 ORTHO05D008889 1.8e-46 190.3 194 51.5
Thecc.04G001600 Theobroma cacao HOM05D002799 ORTHO05D008889 1.8e-46 190.3 192 54.2
Actinidia08736 Actinidia chinensis HOM05D002799 ORTHO05D008889 3.0e-46 189.5 188 55.3
CAN.G1110.21 Capsicum annuum HOM05D002799 ORTHO05D008889 8.7e-46 188.0 192 54.2
Medtr8g063470 Medicago truncatula HOM05D002799 ORTHO05D008889 8.7e-46 188.0 192 52.6
Nitab4.5_0002229g0090 Nicotiana tabacum HOM05D002799 ORTHO05D008889 8.7e-46 188.0 192 52.6
QL09p025834 Quercus lobata HOM05D002799 ORTHO05D008889 1.1e-45 187.6 192 55.2
Gohir.A11G169200 Gossypium hirsutum HOM05D002799 ORTHO05D008889 1.5e-45 187.2 191 52.9
Nitab4.5_0000207g0420 Nicotiana tabacum HOM05D002799 ORTHO05D008889 1.5e-45 187.2 192 52.6
THA.LOC104803694 Tarenaya hassleriana HOM05D002799 ORTHO05D008889 1.5e-45 187.2 190 50.5
Gohir.D11G175400 Gossypium hirsutum HOM05D002799 ORTHO05D008889 1.9e-45 186.8 191 52.9
TPR.G670 Trifolium pratense HOM05D002799 ORTHO05D008889 1.9e-45 186.8 197 51.8
Gorai.007G188000 Gossypium raimondii HOM05D002799 ORTHO05D008889 2.5e-45 186.4 191 52.9
Lsat_1_v5_gn_5_146100 Lactuca sativa HOM05D002799 ORTHO05D008889 2.5e-45 186.4 194 52.6
Lsat_1_v5_gn_8_74380 Lactuca sativa HOM05D002799 ORTHO05D008889 3.3e-45 186.0 205 51.7
Lalb_Chr09g0335071 Lupinus albus HOM05D002799 ORTHO05D008889 3.3e-45 186.0 190 54.2
Sopen10g002540 Solanum pennellii HOM05D002799 ORTHO05D008889 3.3e-45 186.0 192 53.1
MSTRG.17884 Avicennia marina HOM05D002799 ORTHO05D008889 5.7e-45 185.3 201 52.2
vmacro06499 Vaccinium macrocarpon HOM05D002799 ORTHO05D008889 5.7e-45 185.3 180 56.7
Glyma.18G134600 Glycine max HOM05D002799 ORTHO05D008889 7.4e-45 184.9 191 52.9
PGSC0003DMG400024993 Solanum tuberosum HOM05D002799 ORTHO05D008889 1.3e-44 184.1 192 53.1
GSVIVG01024450001 Vitis vinifera HOM05D002799 ORTHO05D008889 3.7e-44 182.6 194 53.1
TWI60G0329 Tripterygium wilfordii HOM05D002799 ORTHO05D008889 1.1e-43 181.0 177 55.9
Migut.M01834 Erythranthe guttata HOM05D002799 ORTHO05D008889 1.8e-43 180.3 192 50.0
Glyma.08G289900 Glycine max HOM05D002799 ORTHO05D008889 1.8e-43 180.3 191 51.8
Os06g0114650 Oryza sativa ssp. japonica HOM05D002799 ORTHO05D008889 6.9e-43 178.3 189 51.9
Carub.0003s3061 Capsella rubella HOM05D002799 ORTHO05D008889 1.2e-42 177.6 191 49.2
AUR62028150 Chenopodium quinoa HOM05D002799 ORTHO05D008889 1.2e-42 177.6 188 53.2
Sp3g29930 Schrenkiella parvula HOM05D002799 ORTHO05D008889 1.2e-42 177.6 191 48.2
VMungo0251G2787 Vigna mungo HOM05D002799 ORTHO05D008889 1.2e-42 177.6 187 55.1
Oeu053393.1 Olea europaea HOM05D002799 ORTHO05D008889 1.5e-42 177.2 178 54.5
Phvul.003G054200 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 1.5e-42 177.2 191 52.4
Nn3g19277 Nelumbo nucifera HOM05D002799 ORTHO05D008889 2.0e-42 176.8 173 55.5
Atru.chr12.2012 Acer truncatum HOM05D002799 ORTHO05D008889 2.6e-42 176.4 203 50.7
Thhalv10022876m.g Eutrema salsugineum HOM05D002799 ORTHO05D008889 2.6e-42 176.4 187 50.3
SGA_v2.0_scaffold70G23573 Striga asiatica HOM05D002799 ORTHO05D008889 3.4e-42 176.0 187 51.9
Phvul.003G053900 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 5.9e-42 175.3 191 51.8
BcaB07g31750 Brassica carinata HOM05D002799 ORTHO05D008889 2.2e-41 173.3 191 48.7
EL10Ac3g05099 Beta vulgaris HOM05D002799 ORTHO05D008889 2.9e-41 172.9 187 51.9
Ah.04g157280 Amaranthus hybridus HOM05D002799 ORTHO05D008889 3.8e-41 172.6 192 48.4
AL3G49530 Arabidopsis lyrata HOM05D002799 ORTHO05D008889 3.8e-41 172.6 194 47.9
A09p11140 Brassica napus HOM05D002799 ORTHO05D008889 1.1e-40 171.0 191 48.7
BcaC04g23004 Brassica carinata HOM05D002799 ORTHO05D008889 1.4e-40 170.6 191 48.2
C09p13130 Brassica napus HOM05D002799 ORTHO05D008889 1.4e-40 170.6 191 48.2
AT2G16790 Arabidopsis thaliana HOM05D002799 ORTHO05D008889 2.5e-40 169.9 191 47.1
BraA09t36756Z Brassica rapa HOM05D002799 ORTHO05D008889 2.5e-40 169.9 191 48.2
CARHR107040 Cardamine hirsuta HOM05D002799 ORTHO05D008889 3.2e-40 169.5 191 49.2
Aa31LG8G14030 Aethionema arabicum HOM05D002799 ORTHO05D008889 4.2e-40 169.1 195 45.6
Lj1P1032T28 Lonicera japonica HOM05D002799 ORTHO05D008889 4.2e-40 169.1 173 53.8
Peaxi162Scf00257g00081 Petunia axillaris HOM05D002799 ORTHO05D008889 2.7e-39 166.4 176 52.8
BolC9t54208H Brassica oleracea HOM05D002799 ORTHO05D008889 4.6e-39 165.6 187 47.6
Lj4g0019925 Lotus japonicus HOM05D002799 ORTHO05D008889 1.8e-38 163.7 178 50.6
Duzib133G0126 Durio zibethinus HOM05D002799 ORTHO05D008889 2.3e-38 163.3 176 51.7
unitig_746.g26651 Utricularia gibba HOM05D002799 ORTHO05D008889 1.1e-37 161.0 200 46.0
Aqoxy7G00884 Aquilegia oxysepala HOM05D002799 ORTHO05D008889 1.5e-37 160.6 157 56.1
Solyc10g006600.4 Solanum lycopersicum HOM05D002799 ORTHO05D008889 7.4e-37 158.3 149 55.7
Mapoly0046s0106 Marchantia polymorpha HOM05D002799 ORTHO05D008889 1.0e-33 147.9 193 43.0
ATR0829G224 Amborella trichopoda HOM05D002799 ORTHO05D008889 1.7e-33 147.1 207 44.9
AagrBONN_evm.TU.Sc2ySwM_362.1504 Anthoceros agrestis HOM05D002799 ORTHO05D008889 6.5e-33 145.2 197 42.1
ClCG01G005050 Citrullus lanatus HOM05D002799 ORTHO05D008889 1.1e-32 144.4 153 51.6
Pp3c5_2750 Physcomitrium patens HOM05D002799 ORTHO05D008889 2.1e-31 140.2 217 39.2
SMO174G0264 Selaginella moellendorffii HOM05D002799 ORTHO05D008889 6.1e-31 138.7 206 37.9
Ca_14681_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 6.7e-30 135.2 149 51.0
PGR004G1571 Punica granatum HOM05D002799 ORTHO05D008889 1.1e-29 134.4 147 51.0
Sc19g0000240 Simmondsia chinensis HOM05D002799 ORTHO05D008889 4.4e-29 132.5 150 48.7
COL.COLO4_19775 Corchorus olitorius HOM05D002799 ORTHO05D008889 5.7e-29 132.1 150 50.0
Psat4g127040 Pisum sativum HOM05D002799 ORTHO05D008889 8.2e-28 128.3 149 49.7
TPR.G26908 Trifolium pratense HOM05D002799 ORTHO05D008889 4.1e-27 125.9 151 47.7
MD01G1233600 Malus domestica HOM05D002799 ORTHO05D008889 1.7e-25 120.6 113 55.8
Rhsim03G0164800 Rhododendron simsii HOM05D002799 ORTHO05D008889 6.7e-22 108.6 120 52.5
HPP92_002455 Vanilla planifolia HOM05D002799 ORTHO05D008889 2.8e-20 103.2 190 37.4
Cfa026682 Carpinus fangiana HOM05D002799 ORTHO05D008889 6.3e-20 102.1 181 35.9
PRCOL_00003203 Prasinoderma coloniale HOM05D002799 ORTHO05D008889 6.3e-20 102.1 192 35.4
Cre08.g385750 Chlamydomonas reinhardtii HOM05D002799 ORTHO05D008889 2.2e-17 93.6 185 33.0
SHI03438 Sapria himalayana HOM05D002799 ORTHO05D008889 1.2e-15 87.8 140 40.0
MCO08G110 Micromonas commoda HOM05D002799 ORTHO05D008889 1.8e-14 84.0 172 33.7
Ca_28676_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 5.7e-13 79.0 169 30.8
C07p06790 Brassica napus HOM05D002799 ORTHO05D008889 7.5e-13 78.6 72 50.0
BcaB03g16409 Brassica carinata HOM05D002799 ORTHO05D008889 1.8e-11 73.9 74 50.0


User provided reference genes

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