Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO717G0040 Papaver somniferum HOM05D006303 ORTHO05D008007 4.3e-146 521.5 313 100.0
PSO675G0548 Papaver somniferum HOM05D006303 ORTHO05D008007 2.0e-135 486.1 316 95.9
HanXRQChr15g0466041 Helianthus annuus HOM05D006303 ORTHO05D008007 9.3e-40 168.3 333 48.6
Lsat_1_v5_gn_5_148441 Lactuca sativa HOM05D006303 ORTHO05D008007 1.0e-38 164.9 346 43.9
Manes.03G181100 Manihot esculenta HOM05D006303 ORTHO05D008007 1.0e-38 164.9 372 45.2
FvH4_4g15080 Fragaria vesca HOM05D006303 ORTHO05D008007 2.3e-38 163.7 366 44.0
Dinv44508 Davidia involucrata HOM05D006303 ORTHO05D008007 3.9e-38 162.9 322 46.9
FAN12G1910 Fragaria x ananassa HOM05D006303 ORTHO05D008007 6.7e-38 162.2 366 43.7
Medtr5g005960 Medicago truncatula HOM05D006303 ORTHO05D008007 6.7e-38 162.2 358 44.1
FAN07G1279 Fragaria x ananassa HOM05D006303 ORTHO05D008007 1.9e-37 160.6 365 40.8
FAN17G3084 Fragaria x ananassa HOM05D006303 ORTHO05D008007 4.3e-37 159.5 365 45.2
FAN22G0434 Fragaria x ananassa HOM05D006303 ORTHO05D008007 5.6e-37 159.1 365 41.9
Manes.15G026800 Manihot esculenta HOM05D006303 ORTHO05D008007 7.4e-37 158.7 368 45.1
Cc03_g03480 Coffea canephora HOM05D006303 ORTHO05D008007 6.2e-36 155.6 359 47.6
ECA234G3153 Erigeron canadensis HOM05D006303 ORTHO05D008007 8.1e-36 155.2 354 43.5
Nn4g26265 Nelumbo nucifera HOM05D006303 ORTHO05D008007 8.1e-36 155.2 360 48.9
CiPaw.01G163800 Carya illinoinensis HOM05D006303 ORTHO05D008007 9.0e-35 151.8 363 42.4
Sopen09g030560 Solanum pennellii HOM05D006303 ORTHO05D008007 1.5e-34 151.0 348 42.8
Oeu034363.1 Olea europaea HOM05D006303 ORTHO05D008007 3.4e-34 149.8 351 43.9
Aqoxy5G00502 Aquilegia oxysepala HOM05D006303 ORTHO05D008007 4.5e-34 149.4 347 41.5
Peaxi162Scf00437g00041 Petunia axillaris HOM05D006303 ORTHO05D008007 4.5e-34 149.4 372 40.6
Solyc09g075750.1 Solanum lycopersicum HOM05D006303 ORTHO05D008007 5.8e-34 149.1 349 42.7
TWI09G0488 Tripterygium wilfordii HOM05D006303 ORTHO05D008007 5.8e-34 149.1 358 46.6
Nitab4.5_0000260g0090 Nicotiana tabacum HOM05D006303 ORTHO05D008007 7.6e-34 148.7 380 44.2
Nn1g02244 Nelumbo nucifera HOM05D006303 ORTHO05D008007 1.0e-33 148.3 361 47.4
Psat4g211440 Pisum sativum HOM05D006303 ORTHO05D008007 1.3e-33 147.9 352 39.5
PGSC0003DMG400031852 Solanum tuberosum HOM05D006303 ORTHO05D008007 1.3e-33 147.9 362 41.7
Nitab4.5_0007531g0010 Nicotiana tabacum HOM05D006303 ORTHO05D008007 2.2e-33 147.1 379 43.3
Oeu004490.1 Olea europaea HOM05D006303 ORTHO05D008007 1.9e-32 144.1 349 42.1
DCAR_027185 Daucus carota HOM05D006303 ORTHO05D008007 4.2e-32 142.9 351 39.6
Hma1.2p1_0517F.1_g171030 Hydrangea macrophylla HOM05D006303 ORTHO05D008007 4.2e-32 142.9 355 42.3
TPR.G37902 Trifolium pratense HOM05D006303 ORTHO05D008007 5.5e-32 142.5 361 41.6
MSTRG.4016 Avicennia marina HOM05D006303 ORTHO05D008007 4.6e-31 139.4 373 39.4
Duzib052G1015 Durio zibethinus HOM05D006303 ORTHO05D008007 1.0e-30 138.3 378 37.3
Ah.04g154500 Amaranthus hybridus HOM05D006303 ORTHO05D008007 1.8e-30 137.5 349 44.7
Glyma.11G004400 Glycine max HOM05D006303 ORTHO05D008007 3.9e-30 136.3 373 37.0
Lj1g0001361 Lotus japonicus HOM05D006303 ORTHO05D008007 3.9e-30 136.3 369 40.1
MSTRG.24747 Avicennia marina HOM05D006303 ORTHO05D008007 5.1e-30 136.0 345 38.6
ClCG06G006020 Citrullus lanatus HOM05D006303 ORTHO05D008007 1.5e-29 134.4 369 40.1
Ca_24387_v3 Cicer arietinum L. HOM05D006303 ORTHO05D008007 2.5e-29 133.7 325 45.2
Haze_00877 Corylus avellana HOM05D006303 ORTHO05D008007 2.5e-29 133.7 344 42.4
CiPaw.02G095400 Carya illinoinensis HOM05D006303 ORTHO05D008007 4.3e-29 132.9 371 40.4
MELO3C014489.2 Cucumis melo HOM05D006303 ORTHO05D008007 4.3e-29 132.9 366 38.0
MD16G1188900 Malus domestica HOM05D006303 ORTHO05D008007 4.3e-29 132.9 337 41.8
TAR365G0083 Trochodendron aralioides HOM05D006303 ORTHO05D008007 7.4e-29 132.1 346 42.2
Cfa015618 Carpinus fangiana HOM05D006303 ORTHO05D008007 9.6e-29 131.7 316 43.0
Sed0009344 Sechium edule HOM05D006303 ORTHO05D008007 1.3e-28 131.3 363 37.2
Thecc.04G227500 Theobroma cacao HOM05D006303 ORTHO05D008007 1.3e-28 131.3 383 39.9
PGR004G2192 Punica granatum HOM05D006303 ORTHO05D008007 4.8e-28 129.4 374 38.5
QL06p003344 Quercus lobata HOM05D006303 ORTHO05D008007 4.8e-28 129.4 327 42.5
Dinv38426 Davidia involucrata HOM05D006303 ORTHO05D008007 6.2e-28 129.0 355 43.7
BcaB04g19742 Brassica carinata HOM05D006303 ORTHO05D008007 8.2e-28 128.6 334 36.2
Cpa.g.sc147.34 Carica papaya HOM05D006303 ORTHO05D008007 1.1e-27 128.3 349 40.1
Gohir.A09G214600 Gossypium hirsutum HOM05D006303 ORTHO05D008007 1.1e-27 128.3 370 42.4
TWI53G0528 Tripterygium wilfordii HOM05D006303 ORTHO05D008007 1.4e-27 127.9 325 45.8
Gorai.006G237600 Gossypium raimondii HOM05D006303 ORTHO05D008007 3.1e-27 126.7 366 42.6
CsaV3_6G038260 Cucumis sativus L. HOM05D006303 ORTHO05D008007 4.0e-27 126.3 369 36.9
Gohir.D09G217100 Gossypium hirsutum HOM05D006303 ORTHO05D008007 4.0e-27 126.3 365 44.4
VMungo1215G3149 Vigna mungo HOM05D006303 ORTHO05D008007 4.0e-27 126.3 363 41.6
Sabra10G0052900 Salix brachista HOM05D006303 ORTHO05D008007 1.2e-26 124.8 381 39.6
BolC9t53571H Brassica oleracea HOM05D006303 ORTHO05D008007 4.5e-26 122.9 330 43.9
C09p06490 Brassica napus HOM05D006303 ORTHO05D008007 5.8e-26 122.5 311 43.7
MD13G1188500 Malus domestica HOM05D006303 ORTHO05D008007 1.7e-25 120.9 346 36.7
BcaC04g23610 Brassica carinata HOM05D006303 ORTHO05D008007 2.2e-25 120.6 326 43.9
A09p05910 Brassica napus HOM05D006303 ORTHO05D008007 2.2e-25 120.6 310 45.5
Atru.chr4.2516 Acer truncatum HOM05D006303 ORTHO05D008007 2.9e-25 120.2 369 42.5
arahy.Tifrunner.gnm1.ann1.RSQ2PF Arachis hypogaea HOM05D006303 ORTHO05D008007 3.8e-25 119.8 334 44.3
COL.COLO4_06194 Corchorus olitorius HOM05D006303 ORTHO05D008007 3.8e-25 119.8 374 37.7
Phvul.002G047200 Phaseolus vulgaris HOM05D006303 ORTHO05D008007 6.5e-25 119.0 357 40.3
PSO384G0046 Papaver somniferum HOM05D006303 ORTHO05D008007 2.5e-24 117.1 391 32.2
SalBow2G0078 Salvia bowleyana HOM05D006303 ORTHO05D008007 1.2e-23 114.8 319 44.8
Aqoxy2G03353 Aquilegia oxysepala HOM05D006303 ORTHO05D008007 1.6e-23 114.4 304 44.4
Lsat_1_v5_gn_7_65920 Lactuca sativa HOM05D006303 ORTHO05D008007 1.6e-23 114.4 313 38.0
Potri.010G090500 Populus trichocarpa HOM05D006303 ORTHO05D008007 1.6e-23 114.4 382 40.8
Prupe.1G155600 Prunus persica HOM05D006303 ORTHO05D008007 2.1e-23 114.0 342 40.9
Duzib212G0816 Durio zibethinus HOM05D006303 ORTHO05D008007 2.7e-23 113.6 377 41.1
THA.LOC104802760 Tarenaya hassleriana HOM05D006303 ORTHO05D008007 4.6e-23 112.8 320 39.7
BcaNung03972 Brassica carinata HOM05D006303 ORTHO05D008007 1.3e-22 111.3 323 43.3
MBI17_g34761_MAGBIO Magnolia biondii HOM05D006303 ORTHO05D008007 1.8e-22 110.9 331 38.7
BraA09t36233Z Brassica rapa HOM05D006303 ORTHO05D008007 6.7e-22 109.0 308 44.2
Sc13g0004270 Simmondsia chinensis HOM05D006303 ORTHO05D008007 4.3e-21 106.3 352 35.8
Nn2g13850 Nelumbo nucifera HOM05D006303 ORTHO05D008007 5.7e-21 105.9 319 42.9
SalBow5G2627 Salvia bowleyana HOM05D006303 ORTHO05D008007 1.3e-20 104.8 352 42.9
SalBow5G4234 Salvia bowleyana HOM05D006303 ORTHO05D008007 3.7e-20 103.2 356 42.4
Ciclev10005353m.g Citrus clementina HOM05D006303 ORTHO05D008007 8.2e-20 102.1 370 39.7
PSO135G0705 Papaver somniferum HOM05D006303 ORTHO05D008007 5.3e-19 99.4 399 30.3
BcaNung02811 Brassica carinata HOM05D006303 ORTHO05D008007 5.9e-18 95.9 325 36.6
A06p36730 Brassica napus HOM05D006303 ORTHO05D008007 5.9e-18 95.9 318 38.7
C07p41810 Brassica napus HOM05D006303 ORTHO05D008007 5.9e-18 95.9 325 36.6
BolC7t44712H Brassica oleracea HOM05D006303 ORTHO05D008007 5.9e-18 95.9 325 36.6
BraA06t26595Z Brassica rapa HOM05D006303 ORTHO05D008007 5.9e-18 95.9 318 38.7
Migut.G00317 Erythranthe guttata HOM05D006303 ORTHO05D008007 1.0e-17 95.1 228 37.7
CANSAT78G1152 Cannabis sativa HOM05D006303 ORTHO05D008007 1.3e-17 94.7 395 34.9
Thhalv10004558m.g Eutrema salsugineum HOM05D006303 ORTHO05D008007 2.2e-17 94.0 320 38.8
EL10As3g23363 Beta vulgaris HOM05D006303 ORTHO05D008007 6.5e-17 92.4 378 38.4
Aa31LG11G10320 Aethionema arabicum HOM05D006303 ORTHO05D008007 1.1e-16 91.7 244 48.0
arahy.Tifrunner.gnm1.ann1.KMTU0V Arachis hypogaea HOM05D006303 ORTHO05D008007 1.1e-16 91.7 327 39.4
Sp2g21520 Schrenkiella parvula HOM05D006303 ORTHO05D008007 1.1e-16 91.7 313 40.9
arahy.Tifrunner.gnm1.ann1.S8XWMG Arachis hypogaea HOM05D006303 ORTHO05D008007 1.4e-16 91.3 339 38.3
AL6G38240 Arabidopsis lyrata HOM05D006303 ORTHO05D008007 5.5e-16 89.4 343 40.5
AT5G26230 Arabidopsis thaliana HOM05D006303 ORTHO05D008007 7.2e-16 89.0 344 34.9
Carub.0006s2405 Capsella rubella HOM05D006303 ORTHO05D008007 7.9e-15 85.5 340 39.7
CARHR187140 Cardamine hirsuta HOM05D006303 ORTHO05D008007 1.4e-14 84.7 326 35.6
Actinidia40170 Actinidia chinensis HOM05D006303 ORTHO05D008007 3.3e-13 80.1 188 38.8
ClCG05G005270 Citrullus lanatus HOM05D006303 ORTHO05D008007 2.2e-12 77.4 330 36.1
AUR62038095 Chenopodium quinoa HOM05D006303 ORTHO05D008007 1.1e-11 75.1 173 39.3
Nn3g18018 Nelumbo nucifera HOM05D006303 ORTHO05D008007 1.4e-11 74.7 142 41.5
Rhsim04G0205200 Rhododendron simsii HOM05D006303 ORTHO05D008007 5.3e-11 72.8 143 43.4
MELO3C006546.2 Cucumis melo HOM05D006303 ORTHO05D008007 2.6e-10 70.5 348 35.6
CsaV3_3G013490 Cucumis sativus L. HOM05D006303 ORTHO05D008007 4.5e-10 69.7 350 36.3
SGA_v2.0_scaffold10G05105 Striga asiatica HOM05D006303 ORTHO05D008007 2.2e-09 67.4 226 35.0
Zm00001eb350820 Zea mays HOM05D006303 ORTHO05D008007 3.8e-09 66.6 384 32.6
Lj6C598T9 Lonicera japonica HOM05D006303 ORTHO05D008007 8.5e-09 65.5 86 54.7
HPP92_003595 Vanilla planifolia HOM05D006303 ORTHO05D008007 1.1e-08 65.1 327 36.1
Sed0019333 Sechium edule HOM05D006303 ORTHO05D008007 7.9e-07 58.9 325 36.6
SGA_v2.0_scaffold257G45734 Striga asiatica HOM05D006303 ORTHO05D008007 3.0e-06 57.0 204 30.4
ATR0626G102 Amborella trichopoda HOM05D006303 ORTHO05D008007 6.7e-06 55.8 218 30.3


User provided reference genes

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