Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO717G0022 Papaver somniferum HOM05D005964 ORTHO05D007242 1.4e-97 359.8 208 100.0
PSO717G0069 Papaver somniferum HOM05D005964 ORTHO05D007242 8.0e-64 247.7 182 78.0
PSO675G7054 Papaver somniferum HOM05D005964 ORTHO05D007242 1.4e-63 246.9 184 78.3
Nn1g02066 Nelumbo nucifera HOM05D005964 ORTHO05D007242 3.2e-44 182.6 143 65.0
TAR381G0569 Trochodendron aralioides HOM05D005964 ORTHO05D007242 1.1e-41 174.1 143 63.6
Dinv22873 Davidia involucrata HOM05D005964 ORTHO05D007242 7.5e-38 161.4 143 60.8
MBI04_g27277_MAGBIO Magnolia biondii HOM05D005964 ORTHO05D007242 7.5e-38 161.4 147 56.5
Thecc.03G317600 Theobroma cacao HOM05D005964 ORTHO05D007242 7.5e-38 161.4 145 56.6
Cfa012590 Carpinus fangiana HOM05D005964 ORTHO05D007242 1.7e-37 160.2 140 58.6
PGR042G2449 Punica granatum HOM05D005964 ORTHO05D007242 2.9e-37 159.5 134 56.7
MD00G1001800 Malus domestica HOM05D005964 ORTHO05D007242 6.4e-37 158.3 140 57.9
Dinv28013 Davidia involucrata HOM05D005964 ORTHO05D007242 8.3e-37 157.9 143 59.4
CDE12G0810 Ceratophyllum demersum HOM05D005964 ORTHO05D007242 1.1e-36 157.5 147 57.1
Potri.003G103000 Populus trichocarpa HOM05D005964 ORTHO05D007242 1.1e-36 157.5 140 57.1
Prupe.5G020400 Prunus persica HOM05D005964 ORTHO05D007242 1.4e-36 157.1 148 54.7
Duzib205G1143 Durio zibethinus HOM05D005964 ORTHO05D007242 2.4e-36 156.4 144 56.2
Eucgr.E01239 Eucalyptus grandis HOM05D005964 ORTHO05D007242 2.4e-36 156.4 148 55.4
Actinidia14743 Actinidia chinensis HOM05D005964 ORTHO05D007242 3.2e-36 156.0 143 58.0
CiPaw.11G103200 Carya illinoinensis HOM05D005964 ORTHO05D007242 4.1e-36 155.6 145 57.9
Eucgr.E01230 Eucalyptus grandis HOM05D005964 ORTHO05D007242 5.4e-36 155.2 148 54.7
MD06G1015300 Malus domestica HOM05D005964 ORTHO05D007242 5.4e-36 155.2 140 57.1
Aqoxy7G00888 Aquilegia oxysepala HOM05D005964 ORTHO05D007242 7.1e-36 154.8 141 54.6
Gohir.A03G000012 Gossypium hirsutum HOM05D005964 ORTHO05D007242 7.1e-36 154.8 144 55.6
FvH4_5g23960 Fragaria vesca HOM05D005964 ORTHO05D007242 1.2e-35 154.1 140 57.9
FAN13G2421 Fragaria x ananassa HOM05D005964 ORTHO05D007242 2.1e-35 153.3 141 57.4
Lalb_Chr05g0215451 Lupinus albus HOM05D005964 ORTHO05D007242 2.1e-35 153.3 141 55.3
CANSAT21G0049 Cannabis sativa HOM05D005964 ORTHO05D007242 2.7e-35 152.9 140 56.4
Gohir.D03G177900 Gossypium hirsutum HOM05D005964 ORTHO05D007242 2.7e-35 152.9 144 55.6
Gorai.003G187200 Gossypium raimondii HOM05D005964 ORTHO05D007242 2.7e-35 152.9 144 55.6
Hma1.2p1_0544F.1_g175510 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 6.0e-35 151.8 143 56.6
Hma1.2p1_0544F.1_g175520 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 6.0e-35 151.8 143 56.6
Potri.001G130900 Populus trichocarpa HOM05D005964 ORTHO05D007242 6.0e-35 151.8 140 55.0
FAN18G2518 Fragaria x ananassa HOM05D005964 ORTHO05D007242 7.8e-35 151.4 140 57.1
FAN18G4345 Fragaria x ananassa HOM05D005964 ORTHO05D007242 7.8e-35 151.4 140 57.1
GSVIVG01022785001 Vitis vinifera HOM05D005964 ORTHO05D007242 1.3e-34 150.6 141 56.0
Migut.E01349 Erythranthe guttata HOM05D005964 ORTHO05D007242 1.7e-34 150.2 143 56.6
RcHm_v2.0_Chr7g0213391 Rosa chinensis HOM05D005964 ORTHO05D007242 1.7e-34 150.2 140 55.7
Sc01g0007030 Simmondsia chinensis HOM05D005964 ORTHO05D007242 1.7e-34 150.2 129 56.6
Phvul.002G128700 Phaseolus vulgaris HOM05D005964 ORTHO05D007242 2.3e-34 149.8 122 58.2
VMungo1215G0316 Vigna mungo HOM05D005964 ORTHO05D007242 3.9e-34 149.1 144 54.2
Ciclev10002048m.g Citrus clementina HOM05D005964 ORTHO05D007242 5.1e-34 148.7 145 54.5
Sed0000446 Sechium edule HOM05D005964 ORTHO05D007242 6.6e-34 148.3 145 54.5
Sopen08g024420 Solanum pennellii HOM05D005964 ORTHO05D007242 8.6e-34 147.9 148 54.1
Medtr5g026860 Medicago truncatula HOM05D005964 ORTHO05D007242 1.1e-33 147.5 142 53.5
THA.LOC104811073 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 1.1e-33 147.5 139 53.2
Nitab4.5_0000030g0090 Nicotiana tabacum HOM05D005964 ORTHO05D007242 1.5e-33 147.1 148 54.7
Solyc08g075770.3 Solanum lycopersicum HOM05D005964 ORTHO05D007242 1.5e-33 147.1 148 54.1
arahy.Tifrunner.gnm1.ann1.NL6YXC Arachis hypogaea HOM05D005964 ORTHO05D007242 1.9e-33 146.7 137 54.0
arahy.Tifrunner.gnm1.ann1.PBCI2P Arachis hypogaea HOM05D005964 ORTHO05D007242 1.9e-33 146.7 137 54.0
EL10Ac5g11971 Beta vulgaris HOM05D005964 ORTHO05D007242 1.9e-33 146.7 142 55.6
Nitab4.5_0002930g0010 Nicotiana tabacum HOM05D005964 ORTHO05D007242 1.9e-33 146.7 144 56.2
Peaxi162Scf02295g00024 Petunia axillaris HOM05D005964 ORTHO05D007242 1.9e-33 146.7 148 54.1
Atru.chr6.1471 Acer truncatum HOM05D005964 ORTHO05D007242 2.5e-33 146.4 148 52.0
BcaNung03076 Brassica carinata HOM05D005964 ORTHO05D007242 2.5e-33 146.4 140 52.1
AUR62018605 Chenopodium quinoa HOM05D005964 ORTHO05D007242 2.5e-33 146.4 140 55.0
Glyma.01G149400 Glycine max HOM05D005964 ORTHO05D007242 2.5e-33 146.4 147 53.1
Lj8A334G75 Lonicera japonica HOM05D005964 ORTHO05D007242 3.3e-33 146.0 149 56.4
Manes.17G003600 Manihot esculenta HOM05D005964 ORTHO05D007242 3.3e-33 146.0 149 51.7
Cc08_g05080 Coffea canephora HOM05D005964 ORTHO05D007242 4.3e-33 145.6 125 57.6
TPR.G17260 Trifolium pratense HOM05D005964 ORTHO05D007242 4.3e-33 145.6 144 52.1
Thhalv10025843m.g Eutrema salsugineum HOM05D005964 ORTHO05D007242 5.6e-33 145.2 153 49.7
Glyma.09G213600 Glycine max HOM05D005964 ORTHO05D007242 7.3e-33 144.8 147 53.1
QL12p001050 Quercus lobata HOM05D005964 ORTHO05D007242 9.5e-33 144.4 147 53.7
Psat2g142160 Pisum sativum HOM05D005964 ORTHO05D007242 1.2e-32 144.1 140 52.1
DCAR_008183 Daucus carota HOM05D005964 ORTHO05D007242 1.6e-32 143.7 123 59.3
TWI12G1028 Tripterygium wilfordii HOM05D005964 ORTHO05D007242 1.6e-32 143.7 126 54.0
Gohir.D08G171200 Gossypium hirsutum HOM05D005964 ORTHO05D007242 2.8e-32 142.9 144 52.8
Gorai.004G178600 Gossypium raimondii HOM05D005964 ORTHO05D007242 2.8e-32 142.9 144 52.8
BcaC09g51437 Brassica carinata HOM05D005964 ORTHO05D007242 3.6e-32 142.5 139 50.4
Duzib084G0482 Durio zibethinus HOM05D005964 ORTHO05D007242 3.6e-32 142.5 145 53.8
Lj2g0015502 Lotus japonicus HOM05D005964 ORTHO05D007242 4.7e-32 142.1 152 52.6
Actinidia18160 Actinidia chinensis HOM05D005964 ORTHO05D007242 8.1e-32 141.4 146 52.7
Gohir.A08G150100 Gossypium hirsutum HOM05D005964 ORTHO05D007242 8.1e-32 141.4 144 52.1
Os04g0600400 Oryza sativa ssp. japonica HOM05D005964 ORTHO05D007242 8.1e-32 141.4 134 51.5
ATR0829G145 Amborella trichopoda HOM05D005964 ORTHO05D007242 1.1e-31 141.0 148 49.3
CsaV3_3G001060 Cucumis sativus L. HOM05D005964 ORTHO05D007242 1.1e-31 141.0 140 52.9
Oeu046805.1 Olea europaea HOM05D005964 ORTHO05D007242 1.1e-31 141.0 143 54.5
Sabra03G0070200 Salix brachista HOM05D005964 ORTHO05D007242 1.1e-31 141.0 96 63.5
MELO3C013795.2 Cucumis melo HOM05D005964 ORTHO05D007242 1.4e-31 140.6 140 52.9
HanXRQChr13g0412031 Helianthus annuus HOM05D005964 ORTHO05D007242 1.4e-31 140.6 136 52.2
SalBow8G2874 Salvia bowleyana HOM05D005964 ORTHO05D007242 1.8e-31 140.2 146 52.1
BcaC06g30611 Brassica carinata HOM05D005964 ORTHO05D007242 3.1e-31 139.4 142 51.4
BcaNung04009 Brassica carinata HOM05D005964 ORTHO05D007242 3.1e-31 139.4 140 50.7
CARHR226010 Cardamine hirsuta HOM05D005964 ORTHO05D007242 3.1e-31 139.4 140 51.4
MSTRG.13905 Avicennia marina HOM05D005964 ORTHO05D007242 4.0e-31 139.0 144 52.8
Lsat_1_v5_gn_5_58981 Lactuca sativa HOM05D005964 ORTHO05D007242 4.0e-31 139.0 140 54.3
ECA240G3292 Erigeron canadensis HOM05D005964 ORTHO05D007242 5.2e-31 138.7 141 53.9
Zm00001eb071860 Zea mays HOM05D005964 ORTHO05D007242 8.9e-31 137.9 134 50.7
MSTRG.1771 Avicennia marina HOM05D005964 ORTHO05D007242 1.5e-30 137.1 144 50.7
BolC7t45529H Brassica oleracea HOM05D005964 ORTHO05D007242 1.5e-30 137.1 153 47.7
Sp7g17840 Schrenkiella parvula HOM05D005964 ORTHO05D007242 1.5e-30 137.1 140 50.0
CSS0036776 Camellia sinensis var. sinensis HOM05D005964 ORTHO05D007242 2.0e-30 136.7 96 65.6
AT4G19140 Arabidopsis thaliana HOM05D005964 ORTHO05D007242 2.6e-30 136.3 141 51.1
Carub.0007s2201 Capsella rubella HOM05D005964 ORTHO05D007242 2.6e-30 136.3 143 51.0
vmacro14234 Vaccinium macrocarpon HOM05D005964 ORTHO05D007242 7.6e-30 134.8 96 63.5
AL7G34950 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 1.7e-29 133.7 148 48.0
C01p13130 Brassica napus HOM05D005964 ORTHO05D007242 1.7e-29 133.7 151 46.4
BolC1t01286H Brassica oleracea HOM05D005964 ORTHO05D007242 1.7e-29 133.7 151 46.4
unitig_899.g14736 Utricularia gibba HOM05D005964 ORTHO05D007242 4.9e-29 132.1 145 51.0
Rhsim07G0138900 Rhododendron simsii HOM05D005964 ORTHO05D007242 6.4e-29 131.7 105 60.0
SGA_v2.0_scaffold111G31365 Striga asiatica HOM05D005964 ORTHO05D007242 1.1e-28 131.0 157 47.1
Aa31LG6G1830 Aethionema arabicum HOM05D005964 ORTHO05D007242 1.9e-28 130.2 152 46.1
C07p50270 Brassica napus HOM05D005964 ORTHO05D007242 1.9e-28 130.2 157 45.2
THA.LOC104806194 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 3.2e-28 129.4 140 46.4
A01p11100 Brassica napus HOM05D005964 ORTHO05D007242 5.4e-28 128.6 152 46.1
BraA01t01056Z Brassica rapa HOM05D005964 ORTHO05D007242 5.4e-28 128.6 152 46.1
Sabra01G0101200 Salix brachista HOM05D005964 ORTHO05D007242 5.4e-28 128.6 179 43.0
HanXRQChr03g0081171 Helianthus annuus HOM05D005964 ORTHO05D007242 6.0e-27 125.2 139 49.6
SEGI_32375 Sequoiadendron giganteum HOM05D005964 ORTHO05D007242 1.7e-26 123.6 147 45.6
AUR62007382 Chenopodium quinoa HOM05D005964 ORTHO05D007242 2.3e-26 123.2 95 62.1
A03p51750 Brassica napus HOM05D005964 ORTHO05D007242 3.9e-26 122.5 133 48.9
BraA03t14264Z Brassica rapa HOM05D005964 ORTHO05D007242 1.9e-25 120.2 160 44.4
arahy.Tifrunner.gnm1.ann1.MDU2JP Arachis hypogaea HOM05D005964 ORTHO05D007242 2.5e-25 119.8 98 54.1
Hund11143 Selenicereus undatus HOM05D005964 ORTHO05D007242 1.2e-22 110.9 195 36.9
Mapoly0153s0025 Marchantia polymorpha HOM05D005964 ORTHO05D007242 4.3e-17 92.4 145 41.4
Pp3c6_11480 Physcomitrium patens HOM05D005964 ORTHO05D007242 6.2e-16 88.6 107 40.2
ClCG10G001030 Citrullus lanatus HOM05D005964 ORTHO05D007242 1.8e-15 87.0 100 52.0
HPP92_021116 Vanilla planifolia HOM05D005964 ORTHO05D007242 7.1e-12 75.1 55 58.2
Cpa.g.sc90.42 Carica papaya HOM05D005964 ORTHO05D007242 7.9e-11 71.6 52 57.7
Haze_05991 Corylus avellana HOM05D005964 ORTHO05D007242 1.0e-10 71.2 104 41.3
Ah.12g055850 Amaranthus hybridus HOM05D005964 ORTHO05D007242 3.0e-10 69.7 52 59.6
CBR_g24057 Chara braunii HOM05D005964 ORTHO05D007242 3.0e-10 69.7 108 33.3
AagrBONN_evm.TU.Sc2ySwM_344.1651 Anthoceros agrestis HOM05D005964 ORTHO05D007242 3.9e-10 69.3 115 35.7
PGSC0003DMG400030871 Solanum tuberosum HOM05D005964 ORTHO05D007242 8.7e-10 68.2 45 66.7
Cpa.g.sc90.41 Carica papaya HOM05D005964 ORTHO05D007242 4.3e-09 65.9 43 67.4


User provided reference genes

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