Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO700G0312 Papaver somniferum HOM05D001026 ORTHO05D005232 0.0e+00 1991.5 1028 100.0
PSO447G0261 Papaver somniferum HOM05D001026 ORTHO05D005232 0.0e+00 1950.3 1035 97.8
TAR381G1087 Trochodendron aralioides HOM05D001026 ORTHO05D005232 0.0e+00 1549.6 1036 77.2
Nn7g37838 Nelumbo nucifera HOM05D001026 ORTHO05D005232 0.0e+00 1514.2 1034 76.2
Aqoxy6G00082 Aquilegia oxysepala HOM05D001026 ORTHO05D005232 0.0e+00 1495.7 1031 75.3
QL02p002343 Quercus lobata HOM05D001026 ORTHO05D005232 0.0e+00 1476.5 1029 74.0
MBI06_g22313_MAGBIO Magnolia biondii HOM05D001026 ORTHO05D005232 0.0e+00 1473.0 1075 71.7
Atru.chr13.1116 Acer truncatum HOM05D001026 ORTHO05D005232 0.0e+00 1472.6 1032 72.2
Hma1.2p1_0593F.1_g185750 Hydrangea macrophylla HOM05D001026 ORTHO05D005232 0.0e+00 1463.7 1025 73.9
Ciclev10000130m.g Citrus clementina HOM05D001026 ORTHO05D005232 0.0e+00 1461.4 1041 71.4
vmacro21290 Vaccinium macrocarpon HOM05D001026 ORTHO05D005232 0.0e+00 1457.6 1036 73.0
CiPaw.15G045700 Carya illinoinensis HOM05D001026 ORTHO05D005232 0.0e+00 1456.8 1031 72.7
Thecc.08G101700 Theobroma cacao HOM05D001026 ORTHO05D005232 0.0e+00 1453.0 1034 72.2
Eucgr.B00041 Eucalyptus grandis HOM05D001026 ORTHO05D005232 0.0e+00 1449.9 1033 72.2
THA.LOC104816596 Tarenaya hassleriana HOM05D001026 ORTHO05D005232 0.0e+00 1449.1 1039 70.8
Prupe.1G523400 Prunus persica HOM05D001026 ORTHO05D005232 0.0e+00 1448.7 1036 72.0
Potri.002G100800 Populus trichocarpa HOM05D001026 ORTHO05D005232 0.0e+00 1447.2 1032 71.5
FvH4_5g36450 Fragaria vesca HOM05D001026 ORTHO05D005232 0.0e+00 1440.6 1037 71.4
Lj6g0009212 Lotus japonicus HOM05D001026 ORTHO05D005232 0.0e+00 1440.2 1025 72.0
Sabra02G0079000 Salix brachista HOM05D001026 ORTHO05D005232 0.0e+00 1440.2 1033 71.2
MD08G1188800 Malus domestica HOM05D001026 ORTHO05D005232 0.0e+00 1439.9 1037 72.3
TWI56G0493 Tripterygium wilfordii HOM05D001026 ORTHO05D005232 0.0e+00 1437.2 1031 71.4
Rhsim06G0077700 Rhododendron simsii HOM05D001026 ORTHO05D005232 0.0e+00 1436.8 1044 71.6
RcHm_v2.0_Chr7g0238491 Rosa chinensis HOM05D001026 ORTHO05D005232 0.0e+00 1434.5 1037 71.3
COL.COLO4_12005 Corchorus olitorius HOM05D001026 ORTHO05D005232 0.0e+00 1429.8 1048 71.2
FAN18G1967 Fragaria x ananassa HOM05D001026 ORTHO05D005232 0.0e+00 1427.9 1062 69.7
Duzib041G0801 Durio zibethinus HOM05D001026 ORTHO05D005232 0.0e+00 1426.0 1034 71.3
Cc10_g06660 Coffea canephora HOM05D001026 ORTHO05D005232 0.0e+00 1422.1 1031 71.2
CsaV3_3G047720 Cucumis sativus L. HOM05D001026 ORTHO05D005232 0.0e+00 1421.8 1024 70.9
CAN.G1173.1 Capsicum annuum HOM05D001026 ORTHO05D005232 0.0e+00 1419.4 1022 71.6
Solyc04g074720.3 Solanum lycopersicum HOM05D001026 ORTHO05D005232 0.0e+00 1417.1 1025 71.1
FAN08G3634 Fragaria x ananassa HOM05D001026 ORTHO05D005232 0.0e+00 1415.6 1062 69.3
Manes.18G063378 Manihot esculenta HOM05D001026 ORTHO05D005232 0.0e+00 1415.6 1028 71.1
Sopen04g029690 Solanum pennellii HOM05D001026 ORTHO05D005232 0.0e+00 1414.1 1022 70.8
FAN04G2218 Fragaria x ananassa HOM05D001026 ORTHO05D005232 0.0e+00 1413.7 1073 68.9
GSVIVG01009085001 Vitis vinifera HOM05D001026 ORTHO05D005232 0.0e+00 1410.6 1023 71.6
FAN13G1430 Fragaria x ananassa HOM05D001026 ORTHO05D005232 0.0e+00 1410.2 1055 69.9
Cfa017894 Carpinus fangiana HOM05D001026 ORTHO05D005232 0.0e+00 1407.9 1000 72.3
Oeu029742.2 Olea europaea HOM05D001026 ORTHO05D005232 0.0e+00 1405.2 1027 69.3
Medtr3g080120 Medicago truncatula HOM05D001026 ORTHO05D005232 0.0e+00 1404.0 1026 69.9
CANSAT64G2709 Cannabis sativa HOM05D001026 ORTHO05D005232 0.0e+00 1403.3 1033 71.2
Ca_16276_v3 Cicer arietinum L. HOM05D001026 ORTHO05D005232 0.0e+00 1402.1 1025 70.6
Manes.02G148900 Manihot esculenta HOM05D001026 ORTHO05D005232 0.0e+00 1401.7 1030 69.6
SGA_v2.0_scaffold74G24568 Striga asiatica HOM05D001026 ORTHO05D005232 0.0e+00 1400.6 1030 68.8
Lalb_Chr18g0048141 Lupinus albus HOM05D001026 ORTHO05D005232 0.0e+00 1399.4 1030 70.3
Psat5g110840 Pisum sativum HOM05D001026 ORTHO05D005232 0.0e+00 1399.0 1026 69.9
MSTRG.24986 Avicennia marina HOM05D001026 ORTHO05D005232 0.0e+00 1398.6 1037 68.7
Sed0011558 Sechium edule HOM05D001026 ORTHO05D005232 0.0e+00 1398.6 1027 70.2
Thhalv10006673m.g Eutrema salsugineum HOM05D001026 ORTHO05D005232 0.0e+00 1397.5 1035 69.1
TPR.G34506 Trifolium pratense HOM05D001026 ORTHO05D005232 0.0e+00 1397.5 1026 69.6
AT1G35220 Arabidopsis thaliana HOM05D001026 ORTHO05D005232 0.0e+00 1396.3 1036 69.2
Sp1g25380 Schrenkiella parvula HOM05D001026 ORTHO05D005232 0.0e+00 1395.2 1035 68.9
Peaxi162Scf00030g02517 Petunia axillaris HOM05D001026 ORTHO05D005232 0.0e+00 1394.4 1063 68.3
Gohir.A03G045800 Gossypium hirsutum HOM05D001026 ORTHO05D005232 0.0e+00 1393.3 1033 69.3
BcaB03g13886 Brassica carinata HOM05D001026 ORTHO05D005232 0.0e+00 1388.2 1036 68.8
CARHR286320 Cardamine hirsuta HOM05D001026 ORTHO05D005232 0.0e+00 1387.5 1036 68.2
Gohir.D03G121400 Gossypium hirsutum HOM05D001026 ORTHO05D005232 0.0e+00 1386.3 1039 68.7
Gorai.003G128400 Gossypium raimondii HOM05D001026 ORTHO05D005232 0.0e+00 1385.2 1039 68.6
Sed0018981 Sechium edule HOM05D001026 ORTHO05D005232 0.0e+00 1381.3 1033 68.9
Carub.0001s3287 Capsella rubella HOM05D001026 ORTHO05D005232 0.0e+00 1379.4 1035 67.9
BraA07t28862Z Brassica rapa HOM05D001026 ORTHO05D005232 0.0e+00 1379.0 1035 68.5
A07p10680 Brassica napus HOM05D001026 ORTHO05D005232 0.0e+00 1377.5 1035 68.4
AL1G49940 Arabidopsis lyrata HOM05D001026 ORTHO05D005232 0.0e+00 1376.7 1043 67.7
BolC7t42122H Brassica oleracea HOM05D001026 ORTHO05D005232 0.0e+00 1376.3 1035 68.3
C07p16280 Brassica napus HOM05D001026 ORTHO05D005232 0.0e+00 1375.9 1035 68.3
ClCG11G014330 Citrullus lanatus HOM05D001026 ORTHO05D005232 0.0e+00 1372.1 986 71.4
Aa31LG6G8880 Aethionema arabicum HOM05D001026 ORTHO05D005232 0.0e+00 1370.9 1028 67.8
BcaC06g35430 Brassica carinata HOM05D001026 ORTHO05D005232 0.0e+00 1370.9 1035 68.2
Nitab4.5_0005108g0010 Nicotiana tabacum HOM05D001026 ORTHO05D005232 0.0e+00 1369.4 1001 69.5
SalBow7G3028 Salvia bowleyana HOM05D001026 ORTHO05D005232 0.0e+00 1365.1 1041 67.5
Migut.C00225 Erythranthe guttata HOM05D001026 ORTHO05D005232 0.0e+00 1358.2 1030 68.3
Dinv07074 Davidia involucrata HOM05D001026 ORTHO05D005232 0.0e+00 1356.7 947 74.8
Sc01g0000810 Simmondsia chinensis HOM05D001026 ORTHO05D005232 0.0e+00 1355.5 1042 68.3
VMungo0540G1065 Vigna mungo HOM05D001026 ORTHO05D005232 0.0e+00 1349.3 1086 65.2
Phvul.L003337 Phaseolus vulgaris HOM05D001026 ORTHO05D005232 0.0e+00 1346.6 1033 68.0
Ah.05g169670 Amaranthus hybridus HOM05D001026 ORTHO05D005232 0.0e+00 1342.8 1027 66.8
Lalb_Chr17g0347341 Lupinus albus HOM05D001026 ORTHO05D005232 0.0e+00 1336.6 1027 67.9
DCAR_009580 Daucus carota HOM05D001026 ORTHO05D005232 0.0e+00 1333.5 1026 66.8
Glyma.13G027300 Glycine max HOM05D001026 ORTHO05D005232 0.0e+00 1328.2 987 70.2
ATR0684G075 Amborella trichopoda HOM05D001026 ORTHO05D005232 0.0e+00 1324.7 996 70.0
Lj4C96G17 Lonicera japonica HOM05D001026 ORTHO05D005232 0.0e+00 1316.2 1023 67.4
MELO3C003550.2 Cucumis melo HOM05D001026 ORTHO05D005232 0.0e+00 1315.4 1122 62.9
Nitab4.5_0000786g0020 Nicotiana tabacum HOM05D001026 ORTHO05D005232 0.0e+00 1312.7 1000 67.6
HPP92_016948 Vanilla planifolia HOM05D001026 ORTHO05D005232 0.0e+00 1310.8 1039 65.3
EL10Ac1g01144 Beta vulgaris HOM05D001026 ORTHO05D005232 0.0e+00 1309.7 1025 66.3
Medtr5g085880 Medicago truncatula HOM05D001026 ORTHO05D005232 0.0e+00 1293.9 1032 65.8
Solyc12g057130.3 Solanum lycopersicum HOM05D001026 ORTHO05D005232 0.0e+00 1293.5 1024 65.9
Psat2g022120 Pisum sativum HOM05D001026 ORTHO05D005232 0.0e+00 1292.7 1026 65.4
LjContig00564g0017936 Lotus japonicus HOM05D001026 ORTHO05D005232 0.0e+00 1273.1 1032 63.9
arahy.Tifrunner.gnm1.ann1.SJ0MJA Arachis hypogaea HOM05D001026 ORTHO05D005232 0.0e+00 1271.9 1025 65.4
arahy.Tifrunner.gnm1.ann1.H5V4Y1 Arachis hypogaea HOM05D001026 ORTHO05D005232 0.0e+00 1267.7 1021 65.2
ECA247G3686 Erigeron canadensis HOM05D001026 ORTHO05D005232 0.0e+00 1267.3 1026 64.5
Lsat_1_v5_gn_9_73921 Lactuca sativa HOM05D001026 ORTHO05D005232 0.0e+00 1266.5 1021 65.2
AUR62018974 Chenopodium quinoa HOM05D001026 ORTHO05D005232 0.0e+00 1249.6 1040 63.8
Lsat_1_v5_gn_1_3061 Lactuca sativa HOM05D001026 ORTHO05D005232 0.0e+00 1243.4 1026 63.5
Sopen12g029790 Solanum pennellii HOM05D001026 ORTHO05D005232 0.0e+00 1241.1 981 66.8
Gorai.010G037700 Gossypium raimondii HOM05D001026 ORTHO05D005232 0.0e+00 1238.0 1034 62.7
HanXRQChr09g0248911 Helianthus annuus HOM05D001026 ORTHO05D005232 0.0e+00 1238.0 1030 63.5
TPR.G14449 Trifolium pratense HOM05D001026 ORTHO05D005232 0.0e+00 1236.5 1035 63.0
Ca_06108_v3 Cicer arietinum L. HOM05D001026 ORTHO05D005232 0.0e+00 1229.2 1054 62.5
Os01g0303200 Oryza sativa ssp. japonica HOM05D001026 ORTHO05D005232 0.0e+00 1214.1 1024 61.8
VMungo0647G2280 Vigna mungo HOM05D001026 ORTHO05D005232 0.0e+00 1213.7 1037 62.2
ECA232G4443 Erigeron canadensis HOM05D001026 ORTHO05D005232 0.0e+00 1208.7 967 65.5
Hund16887 Selenicereus undatus HOM05D001026 ORTHO05D005232 0.0e+00 1207.6 1046 61.2
arahy.Tifrunner.gnm1.ann1.1274C3 Arachis hypogaea HOM05D001026 ORTHO05D005232 0.0e+00 1204.9 1140 58.6
HanXRQChr12g0379801 Helianthus annuus HOM05D001026 ORTHO05D005232 0.0e+00 1204.5 1029 61.5
CSS0035277 Camellia sinensis var. sinensis HOM05D001026 ORTHO05D005232 0.0e+00 1198.3 877 71.7
PGSC0003DMG400017755 Solanum tuberosum HOM05D001026 ORTHO05D005232 0.0e+00 1190.3 1024 62.5
AUR62027815 Chenopodium quinoa HOM05D001026 ORTHO05D005232 0.0e+00 1187.6 1024 62.5
Zm00001eb288650 Zea mays HOM05D001026 ORTHO05D005232 0.0e+00 1186.8 1036 59.8
arahy.Tifrunner.gnm1.ann1.Z84UIM Arachis hypogaea HOM05D001026 ORTHO05D005232 0.0e+00 1184.5 1172 57.0
Os05g0355133 Oryza sativa ssp. japonica HOM05D001026 ORTHO05D005232 0.0e+00 1182.9 1037 59.5
Gohir.D06G034200 Gossypium hirsutum HOM05D001026 ORTHO05D005232 0.0e+00 1179.9 945 65.5
Glyma.02G270100 Glycine max HOM05D001026 ORTHO05D005232 0.0e+00 1159.4 1027 61.6
Actinidia30796 Actinidia chinensis HOM05D001026 ORTHO05D005232 0.0e+00 1140.2 1007 62.6
Phvul.008G211900 Phaseolus vulgaris HOM05D001026 ORTHO05D005232 0.0e+00 1124.8 1034 58.9
unitig_46.g17923 Utricularia gibba HOM05D001026 ORTHO05D005232 0.0e+00 1117.1 917 65.3
Zm00001eb130190 Zea mays HOM05D001026 ORTHO05D005232 0.0e+00 1100.5 951 61.3
Gohir.A06G033300 Gossypium hirsutum HOM05D001026 ORTHO05D005232 1.2e-309 1066.6 882 63.7
MD15G1376700 Malus domestica HOM05D001026 ORTHO05D005232 1.2e-301 1040.0 840 66.3
CDE10G1069 Ceratophyllum demersum HOM05D001026 ORTHO05D005232 2.3e-297 1025.8 961 59.1
AagrBONN_evm.TU.Sc2ySwM_228.1520 Anthoceros agrestis HOM05D001026 ORTHO05D005232 2.7e-277 959.1 1043 50.5
Zm00001eb286080 Zea mays HOM05D001026 ORTHO05D005232 6.1e-274 948.0 894 57.6
Mapoly0104s0038 Marchantia polymorpha HOM05D001026 ORTHO05D005232 1.7e-268 929.9 1040 49.6
Hund26991 Selenicereus undatus HOM05D001026 ORTHO05D005232 2.9e-263 912.5 794 63.7
SMO356G0157 Selaginella moellendorffii HOM05D001026 ORTHO05D005232 2.7e-253 879.4 989 49.8
Dinv05859 Davidia involucrata HOM05D001026 ORTHO05D005232 2.3e-244 849.7 646 69.0
Haze_18258 Corylus avellana HOM05D001026 ORTHO05D005232 6.9e-241 838.2 654 67.6
Pp3c2_15510 Physcomitrium patens HOM05D001026 ORTHO05D005232 7.1e-238 828.2 1043 45.4
Pp3c1_27170 Physcomitrium patens HOM05D001026 ORTHO05D005232 5.1e-236 822.0 1035 45.4
Peaxi162Scf00571g00528 Petunia axillaris HOM05D001026 ORTHO05D005232 4.0e-225 785.8 638 64.9
CBR_g5699 Chara braunii HOM05D001026 ORTHO05D005232 5.8e-224 781.9 1230 41.4
Glyma.20G056500 Glycine max HOM05D001026 ORTHO05D005232 7.9e-221 771.5 666 62.9
SMO134G0184 Selaginella moellendorffii HOM05D001026 ORTHO05D005232 6.7e-212 741.9 899 44.5
Glyma.20G056600 Glycine max HOM05D001026 ORTHO05D005232 8.2e-178 628.6 390 80.0
Dinv05858 Davidia involucrata HOM05D001026 ORTHO05D005232 5.3e-177 625.9 357 84.9
Manes.18G025208 Manihot esculenta HOM05D001026 ORTHO05D005232 4.7e-157 559.7 390 73.3
SEGI_18178 Sequoiadendron giganteum HOM05D001026 ORTHO05D005232 3.0e-151 540.4 575 51.3
Psat0s5307g0040 Pisum sativum HOM05D001026 ORTHO05D005232 2.7e-144 517.3 401 70.1
Psat4g114320 Pisum sativum HOM05D001026 ORTHO05D005232 1.7e-143 514.6 381 72.2
SHI20583 Sapria himalayana HOM05D001026 ORTHO05D005232 2.4e-132 477.6 545 49.5
Haze_18259 Corylus avellana HOM05D001026 ORTHO05D005232 2.6e-99 367.9 238 81.1
MD15G1376600 Malus domestica HOM05D001026 ORTHO05D005232 3.4e-99 367.5 205 81.0
Psat3g111360 Pisum sativum HOM05D001026 ORTHO05D005232 6.5e-98 363.2 261 72.4
arahy.Tifrunner.gnm1.ann1.WH8Y2A Arachis hypogaea HOM05D001026 ORTHO05D005232 3.0e-95 354.4 268 70.1
SHI20581 Sapria himalayana HOM05D001026 ORTHO05D005232 3.3e-86 324.3 239 70.7
Cre10.g457150 Chlamydomonas reinhardtii HOM05D001026 ORTHO05D005232 3.9e-79 300.8 860 29.1
Psat1g107360 Pisum sativum HOM05D001026 ORTHO05D005232 7.0e-76 290.0 227 69.2
Haze_18261 Corylus avellana HOM05D001026 ORTHO05D005232 9.1e-76 289.7 162 80.2
Hund26990 Selenicereus undatus HOM05D001026 ORTHO05D005232 8.8e-71 273.1 150 81.3
Psat7g123360 Pisum sativum HOM05D002169 ORTHO05D006577 3.7e-61 241.1 222 54.5
Psat0s2339g0080 Pisum sativum HOM05D001026 ORTHO05D005232 1.5e-49 202.6 170 69.4
PRCOL_00002948 Prasinoderma coloniale HOM05D001026 ORTHO05D005232 5.5e-49 200.7 478 33.5
SHI20572 Sapria himalayana HOM05D001026 ORTHO05D005232 9.8e-46 189.9 114 70.2
QL02p059881 Quercus lobata HOM05D001026 ORTHO05D005232 1.4e-44 186.0 148 76.4
Psat0s3076g0120 Pisum sativum HOM05D003435 ORTHO05D004032 9.2e-44 183.3 188 56.9
SEGI_27036 Sequoiadendron giganteum HOM05D001026 ORTHO05D005232 3.6e-40 171.4 90 82.2
Psat3g007920 Pisum sativum HOM05D001026 ORTHO05D005232 1.2e-38 166.4 150 58.7
Psat4g129920 Pisum sativum HOM05D003435 ORTHO05D004032 1.2e-35 156.4 201 47.3
Psat0s3521g0080 Pisum sativum HOM05D000555 ORTHO05D001906 4.3e-33 147.9 126 61.9
SEGI_36321 Sequoiadendron giganteum HOM05D001026 ORTHO05D005232 2.0e-30 139.0 88 67.0
HPP92_016951 Vanilla planifolia HOM05D001026 ORTHO05D005232 6.4e-29 134.0 77 72.7
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 1.0e-26 126.7 131 57.3
Psat0s1135g0080 Pisum sativum HOM05D001026 ORTHO05D005232 1.1e-23 116.7 96 59.4
CDE10G0833 Ceratophyllum demersum HOM05D001026 ORTHO05D023993 2.3e-23 115.5 82 73.2
Psat3g111480 Pisum sativum HOM05D001026 ORTHO05D008599 1.7e-21 109.4 101 64.4
C05p28240 Brassica napus HOM05D001026 ORTHO05D023993 2.1e-16 92.4 99 50.5
BolC5t31548H Brassica oleracea HOM05D001026 ORTHO05D023993 2.1e-16 92.4 99 50.5
BcaC05g26968 Brassica carinata HOM05D001026 ORTHO05D023993 1.1e-15 90.1 81 58.0
Psat0s3199g0080 Pisum sativum HOM05D000071 ORTHO05D022797 6.8e-15 87.4 58 75.9
AagrBONN_evm.TU.Sc2ySwM_368.2118 Anthoceros agrestis HOM05D001026 ORTHO05D005232 1.9e-12 79.3 54 70.4
Psat4g159480 Pisum sativum HOM05D002169 ORTHO05D006577 1.2e-11 76.6 77 45.5
SHI20575 Sapria himalayana HOM05D001026 ORTHO05D005232 2.1e-11 75.9 46 76.1
Psat3g007840 Pisum sativum HOM05D001026 ORTHO05D005232 2.1e-08 65.9 65 50.8
BcaB07g32536 Brassica carinata HOM05D001026 ORTHO05D023993 4.0e-07 61.6 81 46.9


User provided reference genes

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