Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO700G0221 Papaver somniferum HOM05D006974 ORTHO05D008869 7.5e-200 700.3 345 100.0
PSO478G3596 Papaver somniferum HOM05D006974 ORTHO05D008869 1.5e-38 164.5 164 55.5
TAR375G0533 Trochodendron aralioides HOM05D006974 ORTHO05D008869 2.9e-18 97.1 220 35.0
Aqoxy7G00678 Aquilegia oxysepala HOM05D006974 ORTHO05D008869 7.9e-16 89.0 151 34.4
Sabra15G0142800 Salix brachista HOM05D006974 ORTHO05D008869 3.9e-15 86.7 186 32.8
Thecc.03G158800 Theobroma cacao HOM05D006974 ORTHO05D008869 5.1e-15 86.3 182 34.1
Duzib205G0143 Durio zibethinus HOM05D006974 ORTHO05D008869 4.3e-14 83.2 140 37.1
Rhsim03G0169600 Rhododendron simsii HOM05D006974 ORTHO05D008869 5.7e-14 82.8 176 34.1
Potri.015G129500 Populus trichocarpa HOM05D006974 ORTHO05D008869 7.4e-14 82.4 133 36.8
Hma1.2p1_0654F.1_g196510 Hydrangea macrophylla HOM05D006974 ORTHO05D008869 9.7e-14 82.0 127 40.2
Gohir.D12G265200 Gossypium hirsutum HOM05D006974 ORTHO05D008869 1.6e-13 81.3 104 45.2
Gohir.A12G265001 Gossypium hirsutum HOM05D006974 ORTHO05D008869 2.8e-13 80.5 146 37.0
Gorai.008G284900 Gossypium raimondii HOM05D006974 ORTHO05D008869 2.8e-13 80.5 104 44.2
COL.COLO4_14152 Corchorus olitorius HOM05D006974 ORTHO05D008869 3.7e-13 80.1 187 31.6
GSVIVG01018563001 Vitis vinifera HOM05D006974 ORTHO05D008869 3.7e-13 80.1 219 28.8
arahy.Tifrunner.gnm1.ann1.XGT93E Arachis hypogaea HOM05D006974 ORTHO05D008869 4.8e-13 79.7 150 32.0
Hma1.2p1_0654F.1_g196520 Hydrangea macrophylla HOM05D006974 ORTHO05D008869 8.2e-13 79.0 128 38.3
arahy.Tifrunner.gnm1.ann1.X6V7BH Arachis hypogaea HOM05D006974 ORTHO05D008869 1.1e-12 78.6 150 31.3
Cpa.g.sc3.293 Carica papaya HOM05D006974 ORTHO05D008869 1.8e-12 77.8 143 35.0
Actinidia13564 Actinidia chinensis HOM05D006974 ORTHO05D008869 3.1e-12 77.0 186 28.5
CAN.G254.11 Capsicum annuum HOM05D006974 ORTHO05D008869 5.3e-12 76.3 100 36.0
Glyma.09G230500 Glycine max HOM05D006974 ORTHO05D008869 5.3e-12 76.3 124 37.1
vmacro06778 Vaccinium macrocarpon HOM05D006974 ORTHO05D008869 5.3e-12 76.3 166 31.3
SalBow4G0051 Salvia bowleyana HOM05D006974 ORTHO05D008869 6.9e-12 75.9 138 34.1
Lj3g0014807 Lotus japonicus HOM05D006974 ORTHO05D008869 9.0e-12 75.5 123 36.6
HPP92_005353 Vanilla planifolia HOM05D006974 ORTHO05D008869 2.0e-11 74.3 113 36.3
TPR.G3687 Trifolium pratense HOM05D006974 ORTHO05D008869 2.6e-11 73.9 119 35.3
Cfa008219 Carpinus fangiana HOM05D006974 ORTHO05D008869 3.4e-11 73.6 125 36.0
Ca_12619_v3 Cicer arietinum L. HOM05D006974 ORTHO05D008869 5.9e-11 72.8 100 37.0
Ciclev10004462m.g Citrus clementina HOM05D006974 ORTHO05D008869 5.9e-11 72.8 135 34.8
Lsat_1_v5_gn_8_9321 Lactuca sativa HOM05D006974 ORTHO05D008869 7.6e-11 72.4 143 32.2
Lj1C983G7 Lonicera japonica HOM05D006974 ORTHO05D008869 7.6e-11 72.4 131 35.1
Nn1g01127 Nelumbo nucifera HOM05D006974 ORTHO05D008869 1.0e-10 72.0 131 35.1
FAN03G1949 Fragaria x ananassa HOM05D006974 ORTHO05D008869 1.3e-10 71.6 123 37.4
Haze_13839 Corylus avellana HOM05D006974 ORTHO05D008869 1.7e-10 71.2 167 29.9
Nitab4.5_0000162g0040 Nicotiana tabacum HOM05D006974 ORTHO05D008869 2.2e-10 70.9 125 31.2
MSTRG.27184 Avicennia marina HOM05D006974 ORTHO05D008869 3.8e-10 70.1 139 34.5
Prupe.2G280600 Prunus persica HOM05D006974 ORTHO05D008869 3.8e-10 70.1 144 31.2
Dinv22966 Davidia involucrata HOM05D006974 ORTHO05D008869 5.0e-10 69.7 123 39.8
HanXRQChr05g0142471 Helianthus annuus HOM05D006974 ORTHO05D008869 5.0e-10 69.7 140 32.1
Nitab4.5_0011187g0010 Nicotiana tabacum HOM05D006974 ORTHO05D008869 5.0e-10 69.7 101 33.7
Atru.chr1.665 Acer truncatum HOM05D006974 ORTHO05D008869 8.5e-10 68.9 119 36.1
MD01G1184400 Malus domestica HOM05D006974 ORTHO05D008869 8.5e-10 68.9 97 36.1
SGA_v2.0_scaffold2G01176 Striga asiatica HOM05D006974 ORTHO05D008869 8.5e-10 68.9 122 33.6
Migut.F00452 Erythranthe guttata HOM05D006974 ORTHO05D008869 1.1e-09 68.6 129 31.0
Sed0012101 Sechium edule HOM05D006974 ORTHO05D008869 1.1e-09 68.6 97 37.1
TWI39G1009 Tripterygium wilfordii HOM05D006974 ORTHO05D008869 1.1e-09 68.6 100 37.0
Cc02_g04050 Coffea canephora HOM05D006974 ORTHO05D008869 1.4e-09 68.2 135 30.4
Peaxi162Scf00023g01024 Petunia axillaris HOM05D006974 ORTHO05D008869 1.4e-09 68.2 147 27.9
PGR142G3751 Punica granatum HOM05D006974 ORTHO05D008869 1.4e-09 68.2 141 34.0
CARHR232700 Cardamine hirsuta HOM05D006974 ORTHO05D008869 1.9e-09 67.8 149 30.9
ClCG01G005180 Citrullus lanatus HOM05D006974 ORTHO05D008869 1.9e-09 67.8 126 34.1
QL09p019059 Quercus lobata HOM05D006974 ORTHO05D008869 1.9e-09 67.8 123 35.0
Sc19g0001920 Simmondsia chinensis HOM05D006974 ORTHO05D008869 1.9e-09 67.8 145 33.1
Carub.0007s1572 Capsella rubella HOM05D006974 ORTHO05D008869 3.2e-09 67.0 106 38.7
Medtr4g036495 Medicago truncatula HOM05D006974 ORTHO05D008869 3.2e-09 67.0 103 35.0
Thhalv10024578m.g Eutrema salsugineum HOM05D006974 ORTHO05D008869 5.5e-09 66.2 99 38.4
FAN03G1551 Fragaria x ananassa HOM05D006974 ORTHO05D008869 7.2e-09 65.9 107 38.3
FAN01G0571 Fragaria x ananassa HOM05D006974 ORTHO05D001482 1.2e-08 65.1 104 36.5
RcHm_v2.0_Chr1g0374901 Rosa chinensis HOM05D006974 ORTHO05D008869 1.2e-08 65.1 97 36.1
Phvul.011G007000 Phaseolus vulgaris HOM05D006974 ORTHO05D008869 1.6e-08 64.7 122 29.5
AL7G27850 Arabidopsis lyrata HOM05D006974 ORTHO05D008869 2.1e-08 64.3 149 29.5
BolC7t45901H Brassica oleracea HOM05D006974 ORTHO05D008869 2.1e-08 64.3 99 34.3
Hund11805 Selenicereus undatus HOM05D006974 ORTHO05D008869 2.1e-08 64.3 166 28.3
AT4G25290 Arabidopsis thaliana HOM05D006974 ORTHO05D008869 2.7e-08 63.9 106 36.8
FAN06G1320 Fragaria x ananassa HOM05D006974 ORTHO05D008869 4.6e-08 63.2 97 36.1
FAN06G2397 Fragaria x ananassa HOM05D006974 ORTHO05D008869 4.6e-08 63.2 97 36.1
Psat7g194280 Pisum sativum HOM05D006974 ORTHO05D008869 4.6e-08 63.2 103 35.0
Sp7g23310 Schrenkiella parvula HOM05D006974 ORTHO05D008869 6.1e-08 62.8 149 30.2
BcaC06g32824 Brassica carinata HOM05D006974 ORTHO05D008869 7.9e-08 62.4 111 33.3
CSS0030811 Camellia sinensis var. sinensis HOM05D006974 ORTHO05D008869 7.9e-08 62.4 138 32.6
BraA03t14658Z Brassica rapa HOM05D006974 ORTHO05D008869 1.8e-07 61.2 106 34.9
Eucgr.K00151 Eucalyptus grandis HOM05D006974 ORTHO05D008869 3.0e-07 60.5 141 31.2
C07p54150 Brassica napus HOM05D006974 ORTHO05D008869 3.9e-07 60.1 101 33.7
MD01G1183900 Malus domestica HOM05D006974 ORTHO05D008869 3.9e-07 60.1 93 33.3
MD01G1183500 Malus domestica HOM05D006974 ORTHO05D008869 6.7e-07 59.3 75 36.0
THA.LOC104808287 Tarenaya hassleriana HOM05D006974 ORTHO05D008869 6.7e-07 59.3 127 29.9
CDE11G0471 Ceratophyllum demersum HOM05D006974 ORTHO05D008869 8.8e-07 58.9 126 31.7
unitig_46.g18767 Utricularia gibba HOM05D006974 ORTHO05D008869 1.1e-06 58.5 139 29.5
CsaV3_5G005460 Cucumis sativus L. HOM05D006974 ORTHO05D008869 1.5e-06 58.2 66 39.4
MELO3C005410.2 Cucumis melo HOM05D006974 ORTHO05D008869 2.5e-06 57.4 66 37.9
FvH4_7g27950 Fragaria vesca HOM05D006974 ORTHO05D008869 2.5e-06 57.4 71 40.8
FAN10G1329 Fragaria x ananassa HOM05D006974 ORTHO05D008869 4.3e-06 56.6 82 39.0
A03p55870 Brassica napus HOM05D006974 ORTHO05D008869 5.7e-06 56.2 106 33.0


User provided reference genes

Program Settings