Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO700G0183 Papaver somniferum HOM05D006069 ORTHO05D008101 6.8e-53 210.7 131 100.0
PSO170G3064 Papaver somniferum HOM05D006069 ORTHO05D008101 1.1e-45 186.8 131 87.8
EL10Ac1g02174 Beta vulgaris HOM05D006069 ORTHO05D008101 1.4e-21 106.7 117 52.1
Gohir.A05G256400 Gossypium hirsutum HOM05D006069 ORTHO05D008101 1.4e-21 106.7 116 51.7
Gohir.D05G258200 Gossypium hirsutum HOM05D006069 ORTHO05D008101 4.0e-21 105.1 116 50.9
Gorai.009G269500 Gossypium raimondii HOM05D006069 ORTHO05D008101 4.0e-21 105.1 116 50.9
Nn6g32021 Nelumbo nucifera HOM05D006069 ORTHO05D008101 5.8e-20 101.3 115 53.0
AT1G75810 Arabidopsis thaliana HOM05D006069 ORTHO05D008101 7.6e-20 100.9 117 46.2
AUR62041483 Chenopodium quinoa HOM05D006069 ORTHO05D008101 7.6e-20 100.9 118 48.3
Hma1.2p1_0733F.1_g210300 Hydrangea macrophylla HOM05D006069 ORTHO05D008101 7.6e-20 100.9 118 49.2
AL2G35800 Arabidopsis lyrata HOM05D006069 ORTHO05D008101 1.0e-19 100.5 117 46.2
Thhalv10019558m.g Eutrema salsugineum HOM05D006069 ORTHO05D008101 1.0e-19 100.5 117 47.9
Oeu054481.1 Olea europaea HOM05D006069 ORTHO05D008101 1.3e-19 100.1 119 49.6
SalBow8G0098 Salvia bowleyana HOM05D006069 ORTHO05D008101 1.3e-19 100.1 117 49.6
Thecc.08G047500 Theobroma cacao HOM05D006069 ORTHO05D008101 1.3e-19 100.1 115 51.3
Solyc04g078060.1 Solanum lycopersicum HOM05D006069 ORTHO05D008101 1.7e-19 99.8 118 46.6
Sopen04g031650 Solanum pennellii HOM05D006069 ORTHO05D008101 1.7e-19 99.8 118 46.6
PGSC0003DMG400021511 Solanum tuberosum HOM05D006069 ORTHO05D008101 1.7e-19 99.8 118 46.6
COL.COLO4_26120 Corchorus olitorius HOM05D006069 ORTHO05D008101 2.2e-19 99.4 117 49.6
Duzib041G0459 Durio zibethinus HOM05D006069 ORTHO05D008101 2.2e-19 99.4 115 49.6
Potri.002G020200 Populus trichocarpa HOM05D006069 ORTHO05D008101 2.2e-19 99.4 115 47.8
Sp5g30930 Schrenkiella parvula HOM05D006069 ORTHO05D008101 2.2e-19 99.4 116 47.4
Nitab4.5_0000569g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 2.9e-19 99.0 118 47.5
Sabra02G0016400 Salix brachista HOM05D006069 ORTHO05D008101 3.8e-19 98.6 118 46.6
Dinv31861 Davidia involucrata HOM05D006069 ORTHO05D000038 4.9e-19 98.2 120 49.2
SGA_v2.0_scaffold11G05937 Striga asiatica HOM05D006069 ORTHO05D008101 4.9e-19 98.2 118 48.3
FvH4_2g38290 Fragaria vesca HOM05D006069 ORTHO05D008101 8.4e-19 97.4 116 48.3
Actinidia16995 Actinidia chinensis HOM05D006069 ORTHO05D006669 1.1e-18 97.1 118 47.5
CSS0019530 Camellia sinensis var. sinensis HOM05D006069 ORTHO05D008101 1.1e-18 97.1 118 49.2
Glyma.14G219800 Glycine max HOM05D006069 ORTHO05D008101 1.1e-18 97.1 115 51.3
BcaC03g15627 Brassica carinata HOM05D006069 ORTHO05D008101 1.9e-18 96.3 118 46.6
C02p33660 Brassica napus HOM05D006069 ORTHO05D008101 1.9e-18 96.3 118 46.6
BolC2t09338H Brassica oleracea HOM05D006069 ORTHO05D008101 1.9e-18 96.3 118 46.6
Haze_22649 Corylus avellana HOM05D006069 ORTHO05D008101 1.9e-18 96.3 116 47.4
Migut.N03168 Erythranthe guttata HOM05D006069 ORTHO05D008101 1.9e-18 96.3 117 46.2
FAN15G3329 Fragaria x ananassa HOM05D006069 ORTHO05D008101 1.9e-18 96.3 116 47.4
RcHm_v2.0_Chr6g0303091 Rosa chinensis HOM05D006069 ORTHO05D008101 1.9e-18 96.3 116 48.3
BraA02t07058Z Brassica rapa HOM05D006069 ORTHO05D008101 2.5e-18 95.9 118 46.6
Haze_22650 Corylus avellana HOM05D003905 ORTHO05D005329 2.5e-18 95.9 116 47.4
TAR625G1525 Trochodendron aralioides HOM05D006069 ORTHO05D008101 2.5e-18 95.9 115 50.4
Ca_00837_v3 Cicer arietinum L. HOM05D006069 ORTHO05D008101 3.2e-18 95.5 115 45.2
Phvul.001G005300 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 3.2e-18 95.5 115 49.6
Sc02g0008640 Simmondsia chinensis HOM05D006069 ORTHO05D008101 3.2e-18 95.5 118 46.6
TWI12G0868 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 3.2e-18 95.5 115 45.2
Cfa013967 Carpinus fangiana HOM05D006069 ORTHO05D008101 4.2e-18 95.1 115 47.8
CiPaw.07G148400 Carya illinoinensis HOM05D006069 ORTHO05D008101 4.2e-18 95.1 115 48.7
Duzib093G2212 Durio zibethinus HOM05D006069 ORTHO05D008101 4.2e-18 95.1 115 47.0
PGR031G1000 Punica granatum HOM05D006069 ORTHO05D008101 4.2e-18 95.1 116 47.4
A02p20240 Brassica napus HOM05D006069 ORTHO05D008101 5.5e-18 94.7 118 46.6
CANSAT25G1864 Cannabis sativa HOM05D006069 ORTHO05D008101 5.5e-18 94.7 116 44.8
Medtr3g113620 Medicago truncatula HOM05D006069 ORTHO05D008101 5.5e-18 94.7 115 46.1
Potri.005G241200 Populus trichocarpa HOM05D006069 ORTHO05D008101 5.5e-18 94.7 118 46.6
Oeu061972.1 Olea europaea HOM05D006069 ORTHO05D008101 7.1e-18 94.4 118 46.6
VMungo0647G0980 Vigna mungo HOM05D006069 ORTHO05D008101 7.1e-18 94.4 115 48.7
Eucgr.H00971 Eucalyptus grandis HOM05D006069 ORTHO05D008101 9.3e-18 94.0 118 46.6
Oeu014170.1 Olea europaea HOM05D006069 ORTHO05D008101 9.3e-18 94.0 118 47.5
TWI56G0900 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 9.3e-18 94.0 115 45.2
Ah.00g000260 Amaranthus hybridus HOM05D006069 ORTHO05D008101 1.2e-17 93.6 117 45.3
Carub.0002s2266 Capsella rubella HOM05D006069 ORTHO05D008101 1.2e-17 93.6 118 44.9
FAN27G3260 Fragaria x ananassa HOM05D006069 ORTHO05D008101 1.2e-17 93.6 116 46.6
Lalb_Chr19g0131451 Lupinus albus HOM05D006069 ORTHO05D008101 1.2e-17 93.6 117 46.2
unitig_747.g21531 Utricularia gibba HOM05D006069 ORTHO05D008101 1.2e-17 93.6 115 47.0
BcaB05g24944 Brassica carinata HOM05D006069 ORTHO05D008101 1.6e-17 93.2 120 44.2
Lsat_1_v5_gn_8_29900 Lactuca sativa HOM05D006069 ORTHO05D008101 1.6e-17 93.2 115 48.7
Nitab4.5_0007809g0010 Nicotiana tabacum HOM05D006069 ORTHO05D008101 1.6e-17 93.2 115 47.0
CARHR069230 Cardamine hirsuta HOM05D006069 ORTHO05D008101 2.1e-17 92.8 117 45.3
DCAR_013877 Daucus carota HOM05D006069 ORTHO05D000038 2.1e-17 92.8 114 48.2
SalBow7G4587 Salvia bowleyana HOM05D006069 ORTHO05D008101 2.1e-17 92.8 118 45.8
SGA_v2.0_scaffold47G17498 Striga asiatica HOM05D006069 ORTHO05D008101 2.1e-17 92.8 116 49.1
Aqoxy5G01811 Aquilegia oxysepala HOM05D006069 ORTHO05D008101 2.7e-17 92.4 121 47.9
Nitab4.5_0000934g0080 Nicotiana tabacum HOM05D006069 ORTHO05D008101 2.7e-17 92.4 119 50.4
Atru.chr13.270 Acer truncatum HOM05D006069 ORTHO05D008101 3.5e-17 92.0 118 45.8
Actinidia15431 Actinidia chinensis HOM05D006069 ORTHO05D008101 4.6e-17 91.7 121 46.3
Lalb_Chr01g0008621 Lupinus albus HOM05D006069 ORTHO05D008101 4.6e-17 91.7 117 45.3
Cpa.g.c46170 Carica papaya HOM05D006069 ORTHO05D008101 6.0e-17 91.3 115 45.2
Cpa.g.sc64.165 Carica papaya HOM05D006069 ORTHO05D008101 6.0e-17 91.3 115 45.2
HanXRQChr13g0387231 Helianthus annuus HOM05D006069 ORTHO05D008101 6.0e-17 91.3 115 46.1
Sopen12g030410 Solanum pennellii HOM05D006069 ORTHO05D008101 6.0e-17 91.3 115 43.5
Aa31LG4G6010 Aethionema arabicum HOM05D006069 ORTHO05D008101 7.9e-17 90.9 117 42.7
Ciclev10002907m.g Citrus clementina HOM05D006069 ORTHO05D008101 7.9e-17 90.9 115 43.5
QL02p011928 Quercus lobata HOM05D006069 ORTHO05D008101 7.9e-17 90.9 115 46.1
QL11p034297 Quercus lobata HOM05D006069 ORTHO05D008101 7.9e-17 90.9 115 46.1
unitig_82.g27107 Utricularia gibba HOM05D006069 ORTHO05D008101 7.9e-17 90.9 117 47.0
Cfa013969 Carpinus fangiana HOM05D006069 ORTHO05D008101 1.0e-16 90.5 115 46.1
Glyma.17G258800 Glycine max HOM05D006069 ORTHO05D008101 1.3e-16 90.1 110 53.6
Psat0s2878g0120 Pisum sativum HOM05D006069 ORTHO05D008101 1.3e-16 90.1 118 43.2
Sabra05G0186700 Salix brachista HOM05D006069 ORTHO05D008101 1.3e-16 90.1 118 45.8
VMungo1309G1320 Vigna mungo HOM05D006069 ORTHO05D008101 1.3e-16 90.1 116 45.7
Glyma.06G023700 Glycine max HOM05D006069 ORTHO05D008101 1.8e-16 89.7 117 44.4
Prupe.1G363800 Prunus persica HOM05D006069 ORTHO05D008101 1.8e-16 89.7 115 44.3
PGSC0003DMG400011549 Solanum tuberosum HOM05D006069 ORTHO05D008101 1.8e-16 89.7 116 44.0
Lalb_Chr03g0033431 Lupinus albus HOM05D006069 ORTHO05D008101 3.0e-16 89.0 117 43.6
MD08G1011100 Malus domestica HOM05D006069 ORTHO05D008101 3.0e-16 89.0 115 44.3
arahy.Tifrunner.gnm1.ann1.LEZM1J Arachis hypogaea HOM05D006069 ORTHO05D008101 3.9e-16 88.6 117 47.0
Gohir.A06G002300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 6.7e-16 87.8 119 44.5
Gohir.D06G005300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 6.7e-16 87.8 116 44.0
Gorai.010G002500 Gossypium raimondii HOM05D006069 ORTHO05D008101 6.7e-16 87.8 116 44.0
THA.LOC104811416 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 8.7e-16 87.4 117 42.7
DCAR_016725 Daucus carota HOM05D006069 ORTHO05D008101 1.9e-15 86.3 114 44.7
Duzib116G0547 Durio zibethinus HOM05D006069 ORTHO05D008101 1.9e-15 86.3 109 47.7
Lalb_Chr23g0266111 Lupinus albus HOM05D006069 ORTHO05D008101 2.5e-15 85.9 115 45.2
Sc15g0004900 Simmondsia chinensis HOM05D006069 ORTHO05D008101 2.5e-15 85.9 118 41.5
BcaC08g47069 Brassica carinata HOM05D006069 ORTHO05D008101 3.3e-15 85.5 117 41.0
Manes.18G012400 Manihot esculenta HOM05D006069 ORTHO05D008101 3.3e-15 85.5 117 41.0
BcaC08g47325 Brassica carinata HOM05D006069 ORTHO05D008101 4.3e-15 85.1 117 41.0
BolC6t40015H Brassica oleracea HOM05D006069 ORTHO05D008101 4.3e-15 85.1 117 41.0
MD15G1011100 Malus domestica HOM05D006069 ORTHO05D008101 1.6e-14 83.2 116 45.7
Phvul.009G017800 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 2.1e-14 82.8 111 45.9
BcaC08g47066 Brassica carinata HOM05D006069 ORTHO05D008101 2.8e-14 82.4 117 40.2
Peaxi162Scf00081g00135 Petunia axillaris HOM05D002628 ORTHO05D008101 2.8e-14 82.4 117 42.7
C06p49760 Brassica napus HOM05D006069 ORTHO05D008101 3.7e-14 82.0 117 40.2
Manes.05G145900 Manihot esculenta HOM05D006069 ORTHO05D008101 6.3e-14 81.3 109 43.1
Lsat_1_v5_gn_0_33081 Lactuca sativa HOM05D006069 ORTHO05D008101 1.1e-13 80.5 115 41.7
arahy.Tifrunner.gnm1.ann1.Q2AYB8 Arachis hypogaea HOM05D006069 ORTHO05D008101 1.4e-13 80.1 122 46.7
arahy.Tifrunner.gnm1.ann1.KJD857 Arachis hypogaea HOM05D006069 ORTHO05D008101 3.1e-13 79.0 119 44.5
THA.LOC104805018 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 4.1e-13 78.6 114 39.5
Migut.C00852 Erythranthe guttata HOM05D006069 ORTHO05D008101 5.3e-13 78.2 109 44.0
Nitab4.5_0003228g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 5.3e-13 78.2 108 44.4
Rhsim06G0020100 Rhododendron simsii HOM05D006069 ORTHO05D008101 9.0e-13 77.4 107 43.9
Medtr1g025490 Medicago truncatula HOM05D006069 ORTHO05D008101 3.4e-12 75.5 115 40.9
Psat6g002280 Pisum sativum HOM05D006069 ORTHO05D008101 3.4e-12 75.5 115 38.3
AUR62040543 Chenopodium quinoa HOM05D006069 ORTHO05D009490 5.9e-12 74.7 62 61.3
ECA233G2757 Erigeron canadensis HOM05D006069 ORTHO05D008101 5.0e-11 71.6 104 39.4
Lalb_Chr11g0061821 Lupinus albus HOM05D006069 ORTHO05D008101 6.5e-11 71.2 115 40.0
Dinv26438 Davidia involucrata HOM05D006069 ORTHO05D008101 1.2e-09 67.0 62 54.8
Peaxi162Scf00160g00114 Petunia axillaris HOM05D006069 ORTHO05D008101 3.9e-08 62.0 115 39.1
A07p41340 Brassica napus HOM05D006069 ORTHO05D032697 6.3e-06 54.7 65 46.2


User provided reference genes

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