Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO700G0171 Papaver somniferum HOM05D005719 ORTHO05D007030 4.2e-284 980.7 506 100.0
PSO761G0268 Papaver somniferum HOM05D005719 ORTHO05D007030 2.9e-245 851.7 479 92.5
TAR628G1450 Trochodendron aralioides HOM05D005719 ORTHO05D007030 3.0e-173 612.5 479 67.0
TAR381G0820 Trochodendron aralioides HOM05D005719 ORTHO05D007030 5.1e-165 585.1 454 67.0
Gohir.A05G217800 Gossypium hirsutum HOM05D005719 ORTHO05D007030 2.5e-159 566.2 467 63.0
Gorai.009G226700 Gossypium raimondii HOM05D005719 ORTHO05D007030 1.6e-158 563.5 467 63.2
GSVIVG01009231001 Vitis vinifera HOM05D005719 ORTHO05D007030 3.0e-157 559.3 436 66.1
Duzib093G1837 Durio zibethinus HOM05D005719 ORTHO05D007030 6.7e-157 558.1 479 62.2
Gohir.D05G219700 Gossypium hirsutum HOM05D005719 ORTHO05D007030 1.5e-156 557.0 467 63.2
TWI56G1147 Tripterygium wilfordii HOM05D005719 ORTHO05D007030 8.5e-152 541.2 480 61.2
Thecc.08G076500 Theobroma cacao HOM05D005719 ORTHO05D007030 1.1e-151 540.8 479 59.5
MD08G1208600 Malus domestica HOM05D005719 ORTHO05D007030 2.5e-151 539.7 488 60.5
MD15G1392600 Malus domestica HOM05D005719 ORTHO05D007030 4.2e-151 538.9 487 61.4
QL12p040011 Quercus lobata HOM05D005719 ORTHO05D007030 9.4e-151 537.7 482 59.1
Manes.18G055200 Manihot esculenta HOM05D005719 ORTHO05D007030 1.2e-150 537.3 485 59.6
Prupe.1G540100 Prunus persica HOM05D005719 ORTHO05D007030 1.2e-150 537.3 489 60.7
Sc02g0008400 Simmondsia chinensis HOM05D005719 ORTHO05D007030 4.7e-150 535.4 465 60.2
CANSAT21G2028 Cannabis sativa HOM05D005719 ORTHO05D007030 1.8e-149 533.5 480 58.8
CiPaw.07G161600 Carya illinoinensis HOM05D005719 ORTHO05D007030 3.0e-149 532.7 441 61.7
CSS0009932 Camellia sinensis var. sinensis HOM05D005719 ORTHO05D007030 8.8e-149 531.2 483 59.4
Haze_22505 Corylus avellana HOM05D005719 ORTHO05D007030 2.0e-148 530.0 507 57.0
Sabra02G0085500 Salix brachista HOM05D005719 ORTHO05D007030 2.0e-148 530.0 479 58.9
Actinidia19605 Actinidia chinensis HOM05D005719 ORTHO05D007030 3.4e-148 529.3 480 58.3
MBI16_g44752_MAGBIO Magnolia biondii HOM05D005719 ORTHO05D007030 9.8e-148 527.7 440 62.3
CiPaw.08G058000 Carya illinoinensis HOM05D005719 ORTHO05D007030 2.8e-147 526.2 470 58.7
arahy.Tifrunner.gnm1.ann1.I1WLRD Arachis hypogaea HOM05D005719 ORTHO05D007030 6.3e-147 525.0 479 56.6
arahy.Tifrunner.gnm1.ann1.SLT0HR Arachis hypogaea HOM05D005719 ORTHO05D007030 1.4e-146 523.9 479 56.4
vmacro04622 Vaccinium macrocarpon HOM05D005719 ORTHO05D007030 2.7e-145 519.6 478 57.5
Hma1.2p1_0010F.1_g006360 Hydrangea macrophylla HOM05D005719 ORTHO05D007030 3.5e-145 519.2 479 59.3
Lalb_Chr11g0064791 Lupinus albus HOM05D005719 ORTHO05D007030 2.2e-144 516.5 479 57.2
RcHm_v2.0_Chr7g0233191 Rosa chinensis HOM05D005719 ORTHO05D007030 3.8e-144 515.8 493 59.4
EL10Ac1g02246 Beta vulgaris HOM05D005719 ORTHO05D007030 5.0e-144 515.4 482 57.1
Cfa013832 Carpinus fangiana HOM05D000446 ORTHO05D000321 6.5e-144 515.0 452 60.4
ECA240G4523 Erigeron canadensis HOM05D005719 ORTHO05D007030 3.2e-143 512.7 483 57.3
Glyma.06G092200 Glycine max HOM05D005719 ORTHO05D007030 1.6e-142 510.4 479 55.7
Psat5g018640 Pisum sativum HOM05D005719 ORTHO05D007030 2.7e-142 509.6 481 55.5
Ciclev10000979m.g Citrus clementina HOM05D005719 ORTHO05D007030 4.7e-142 508.8 479 56.6
Eucgr.F02170 Eucalyptus grandis HOM05D005719 ORTHO05D007030 8.0e-142 508.1 480 56.9
PGR031G2819 Punica granatum HOM05D005719 ORTHO05D007030 1.4e-141 507.3 479 58.0
Duzib041G0544 Durio zibethinus HOM05D005719 ORTHO05D007030 2.3e-141 506.5 479 58.2
HanXRQChr03g0065451 Helianthus annuus HOM05D005719 ORTHO05D007030 2.3e-141 506.5 458 57.4
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 3.0e-141 506.1 481 57.0
Phvul.009G145500 Phaseolus vulgaris HOM05D005719 ORTHO05D007030 1.2e-140 504.2 479 55.7
Glyma.04G090400 Glycine max HOM05D005719 ORTHO05D007030 2.0e-140 503.4 479 55.3
Hund05222 Selenicereus undatus HOM05D005719 ORTHO05D007030 3.4e-140 502.7 474 57.8
ClCG11G014800 Citrullus lanatus HOM05D005719 ORTHO05D007030 5.7e-140 501.9 480 56.9
FvH4_5g33860 Fragaria vesca HOM05D005719 ORTHO05D007030 1.7e-139 500.4 488 57.6
Cc10_g08220 Coffea canephora HOM05D005719 ORTHO05D007030 1.1e-138 497.7 502 52.6
Oeu035376.1 Olea europaea HOM05D005719 ORTHO05D007030 1.4e-138 497.3 469 53.3
Lj1g0010479 Lotus japonicus HOM05D005719 ORTHO05D007030 1.8e-138 496.9 464 54.7
Nn1g05685 Nelumbo nucifera HOM05D005719 ORTHO05D007030 1.6e-137 493.8 479 56.8
Nitab4.5_0001608g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 4.5e-137 492.3 489 54.4
Medtr3g111330 Medicago truncatula HOM05D005719 ORTHO05D007030 5.9e-137 491.9 482 54.6
CsaV3_3G048210 Cucumis sativus L. HOM05D005719 ORTHO05D007030 7.7e-137 491.5 480 56.0
TPR.G12418 Trifolium pratense HOM05D005719 ORTHO05D007030 7.7e-137 491.5 479 54.9
Sed0009724 Sechium edule HOM05D005719 ORTHO05D007030 1.3e-136 490.7 482 55.6
Migut.C00296 Erythranthe guttata HOM05D005719 ORTHO05D007030 5.0e-136 488.8 463 53.8
COL.COLO4_35322 Corchorus olitorius HOM05D005719 ORTHO05D007030 9.5e-135 484.6 479 56.8
Lsat_1_v5_gn_7_55820 Lactuca sativa HOM05D005719 ORTHO05D007030 1.2e-134 484.2 488 55.3
THA.LOC104823811 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 1.0e-133 481.1 469 56.7
BcaC06g30902 Brassica carinata HOM05D005719 ORTHO05D007030 6.8e-133 478.4 484 53.5
Sp2g17320 Schrenkiella parvula HOM05D005719 ORTHO05D007030 1.2e-132 477.6 483 54.2
AL5G18300 Arabidopsis lyrata HOM05D005719 ORTHO05D007030 3.4e-132 476.1 502 52.2
Cpa.g.sc177.3 Carica papaya HOM05D005719 ORTHO05D007030 4.4e-132 475.7 412 60.0
AT3G28670 Arabidopsis thaliana HOM05D005719 ORTHO05D007030 1.3e-131 474.2 451 55.4
Atru.chr13.942 Acer truncatum HOM05D005719 ORTHO05D007030 2.9e-131 473.0 483 55.3
Carub.0005s0719 Capsella rubella HOM05D005719 ORTHO05D007030 6.4e-131 471.9 468 54.5
Thhalv10004086m.g Eutrema salsugineum HOM05D005719 ORTHO05D007030 1.1e-130 471.1 465 54.8
Sopen02g003330 Solanum pennellii HOM05D005719 ORTHO05D007030 3.2e-130 469.5 486 52.9
Dinv44886 Davidia involucrata HOM05D005719 ORTHO05D007030 4.1e-130 469.2 401 61.1
FAN08G1402 Fragaria x ananassa HOM05D005719 ORTHO05D007030 4.1e-130 469.2 552 50.2
Solyc02g014380.3 Solanum lycopersicum HOM05D005719 ORTHO05D007030 5.4e-130 468.8 486 52.9
THA.LOC104805699 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 4.6e-129 465.7 477 53.5
VMungo1309G0989 Vigna mungo HOM05D005719 ORTHO05D007030 1.0e-128 464.5 441 56.2
CARHR286650 Cardamine hirsuta HOM05D005719 ORTHO05D007030 1.7e-128 463.8 472 53.0
Aa31LG2G4530 Aethionema arabicum HOM05D005719 ORTHO05D007030 4.3e-127 459.1 459 54.0
MSTRG.25002 Avicennia marina HOM05D005719 ORTHO05D007030 2.1e-126 456.8 482 49.4
CAN.G1751.8 Capsicum annuum HOM05D005719 ORTHO05D007030 6.2e-126 455.3 432 54.6
TPR.G21947 Trifolium pratense HOM05D005719 ORTHO05D007030 6.2e-126 455.3 451 54.5
BcaC06g33632 Brassica carinata HOM05D005719 ORTHO05D007030 8.9e-125 451.4 486 51.2
C07p37630 Brassica napus HOM05D005719 ORTHO05D007030 1.2e-124 451.1 486 51.2
FAN18G0583 Fragaria x ananassa HOM05D005719 ORTHO05D007030 1.5e-124 450.7 440 57.3
A06p40410 Brassica napus HOM05D005719 ORTHO05D007030 2.0e-124 450.3 487 50.9
BraA06t26959Z Brassica rapa HOM05D005719 ORTHO05D007030 2.0e-124 450.3 487 50.9
BolC7t44279H Brassica oleracea HOM05D005719 ORTHO05D007030 2.9e-123 446.4 487 51.1
unitig_749.g13864 Utricularia gibba HOM05D005719 ORTHO05D000442 1.2e-121 441.0 486 47.5
HPP92_028121 Vanilla planifolia HOM05D005719 ORTHO05D007030 1.7e-120 437.2 479 48.2
HPP92_020868 Vanilla planifolia HOM05D005719 ORTHO05D007030 2.5e-119 433.3 479 48.0
AUR62035419 Chenopodium quinoa HOM05D005719 ORTHO05D007030 8.1e-118 428.3 520 48.7
Nitab4.5_0000681g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 8.1e-118 428.3 449 53.0
Rhsim07G0214600 Rhododendron simsii HOM05D005719 ORTHO05D007030 3.1e-117 426.4 379 59.1
SGA_v2.0_scaffold14G07072 Striga asiatica HOM05D005719 ORTHO05D007030 5.8e-116 422.2 493 45.8
Manes.05G187400 Manihot esculenta HOM05D005719 ORTHO05D007030 7.5e-116 421.8 372 58.3
CAN.G1921.11 Capsicum annuum HOM05D005719 ORTHO05D007030 5.1e-112 409.1 485 47.6
MELO3C003498.2 Cucumis melo HOM05D005719 ORTHO05D007030 1.1e-111 407.9 368 59.8
Ca_15541_v3 Cicer arietinum L. HOM05D005719 ORTHO05D007030 1.6e-110 404.1 467 49.0
Peaxi162Scf01397g00011 Petunia axillaris HOM05D005719 ORTHO05D007030 2.0e-108 397.1 364 56.9
Ah.00g000110 Amaranthus hybridus HOM05D005719 ORTHO05D007030 2.6e-108 396.7 382 55.5
CDE07G0720 Ceratophyllum demersum HOM05D005719 ORTHO05D007030 3.7e-107 392.9 480 49.0
PGSC0003DMG400019103 Solanum tuberosum HOM05D005719 ORTHO05D007030 2.7e-105 386.7 484 47.1
Os08g0101400 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 2.1e-97 360.5 466 44.6
SalBow7G1913 Salvia bowleyana HOM05D005719 ORTHO05D007030 8.1e-94 348.6 401 47.1
Potri.002G108700 Populus trichocarpa HOM05D005719 ORTHO05D007030 2.0e-84 317.4 256 64.5
Actinidia29649 Actinidia chinensis HOM05D005719 ORTHO05D007030 2.6e-84 317.0 359 49.3
PGSC0003DMG400019007 Solanum tuberosum HOM05D005719 ORTHO05D007030 4.0e-77 293.1 486 40.3
Mapoly0053s0027 Marchantia polymorpha HOM05D005719 ORTHO05D007030 9.0e-77 292.0 430 40.0
Pp3c26_6510 Physcomitrium patens HOM05D005719 ORTHO05D007030 6.0e-73 279.3 476 38.4
TAR381G1016 Trochodendron aralioides HOM05D005719 ORTHO05D007030 1.1e-66 258.5 193 69.4
Os10g0188900 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 1.4e-66 258.1 281 50.9
TAR381G0292 Trochodendron aralioides HOM05D005719 ORTHO05D007030 9.7e-63 245.4 220 60.0
AUR62035705 Chenopodium quinoa HOM05D005719 ORTHO05D007030 5.9e-60 236.1 269 45.4
Zm00001eb198670 Zea mays HOM05D005719 ORTHO05D007030 9.7e-55 218.8 284 44.4
Lju279A4T8 Lonicera japonica HOM05D005719 ORTHO05D007030 3.4e-52 210.3 166 62.0
SMO118G0237 Selaginella moellendorffii HOM05D005719 ORTHO05D007030 5.5e-50 203.0 417 33.6
HanXRQChr16g0499811 Helianthus annuus HOM05D005719 ORTHO05D007030 9.7e-47 192.2 370 36.2
BcaB04g19478 Brassica carinata HOM05D005719 ORTHO05D007030 1.2e-44 185.3 236 46.2
Duzib116G0315 Durio zibethinus HOM05D005719 ORTHO05D007030 8.8e-40 169.1 142 64.8
ATR0144G003 Amborella trichopoda HOM05D005719 ORTHO05D007030 3.3e-39 167.2 219 43.8
AUR62035707 Chenopodium quinoa HOM05D005719 ORTHO05D007030 2.8e-38 164.1 141 61.7
CBR_g38241 Chara braunii HOM05D005719 ORTHO05D007030 4.8e-38 163.3 394 31.2
Lju170A15T23 Lonicera japonica HOM05D005719 ORTHO05D007030 1.7e-35 154.8 108 69.4
ATR0800G070 Amborella trichopoda HOM05D005719 ORTHO05D007030 6.5e-35 152.9 139 59.7
AagrBONN_evm.TU.Sc2ySwM_369.438 Anthoceros agrestis HOM05D005719 ORTHO05D007030 6.8e-32 142.9 297 32.7
SEGI_36882 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 8.3e-30 136.0 145 52.4
Oeu035375.1 Olea europaea HOM05D005719 ORTHO05D007030 5.5e-26 123.2 147 44.2
Lju170A15T24 Lonicera japonica HOM05D005719 ORTHO05D007030 1.0e-24 119.0 109 61.5
Hund16029 Selenicereus undatus HOM05D005719 ORTHO05D007030 4.0e-24 117.1 195 38.5
COL.COLO4_23153 Corchorus olitorius HOM05D005719 ORTHO05D007030 5.7e-23 113.2 171 45.6
SEGI_23985 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 8.9e-16 89.4 106 41.5
Peaxi162Scf01397g00010 Petunia axillaris HOM05D005719 ORTHO05D007030 7.5e-15 86.3 94 50.0
Cre12.g551000 Chlamydomonas reinhardtii HOM05D005719 ORTHO05D007030 1.4e-13 82.0 543 21.7
Lju279C4T1 Lonicera japonica HOM05D005719 ORTHO05D007030 1.0e-11 75.9 114 48.2


User provided reference genes

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