Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO700G0139 Papaver somniferum HOM05D007310 ORTHO05D002375 3.1e-103 378.6 217 100.0
PSO761G0222 Papaver somniferum HOM05D007310 ORTHO05D002375 2.0e-86 322.8 224 77.7
Nn5g29980 Nelumbo nucifera HOM05D007310 ORTHO05D002375 2.4e-18 96.7 207 35.7
Dinv24166 Davidia involucrata HOM05D007310 ORTHO05D002375 1.0e-16 91.3 117 48.7
CiPaw.05G032100 Carya illinoinensis HOM05D007310 ORTHO05D002375 1.7e-16 90.5 125 46.4
Cfa005685 Carpinus fangiana HOM05D007310 ORTHO05D002375 5.0e-16 89.0 111 47.7
Lalb_Chr09g0326871 Lupinus albus HOM05D007310 ORTHO05D002375 5.0e-16 89.0 134 33.6
Eucgr.I02631 Eucalyptus grandis HOM05D007310 ORTHO05D002375 1.9e-15 87.0 109 45.0
Ciclev10030152m.g Citrus clementina HOM05D007310 ORTHO05D002375 4.6e-14 82.4 138 38.4
MBI06_g03314_MAGBIO Magnolia biondii HOM05D007310 ORTHO05D002375 6.1e-14 82.0 191 34.6
Haze_10565 Corylus avellana HOM05D007310 ORTHO05D002375 7.9e-14 81.6 111 45.9
Hma1.2p1_0784F.1_g217300 Hydrangea macrophylla HOM05D007310 ORTHO05D002375 7.9e-14 81.6 114 46.5
Cc02_g21140 Coffea canephora HOM05D007310 ORTHO05D002375 1.4e-13 80.9 212 31.6
Potri.001G310100 Populus trichocarpa HOM05D007310 ORTHO05D002375 3.9e-13 79.3 116 41.4
CiPaw.06G156100 Carya illinoinensis HOM05D007310 ORTHO05D002375 6.7e-13 78.6 125 44.8
Migut.B00577 Erythranthe guttata HOM05D007310 ORTHO05D002375 4.4e-12 75.9 203 27.6
HPP92_019302 Vanilla planifolia HOM05D007310 ORTHO05D002375 4.4e-12 75.9 111 42.3
CANSAT11G0123 Cannabis sativa HOM05D007310 ORTHO05D002375 7.4e-12 75.1 119 46.2
Glyma.13G042400 Glycine max HOM05D007310 ORTHO05D002375 7.4e-12 75.1 137 35.0
Manes.07G035800 Manihot esculenta HOM05D007310 ORTHO05D002375 1.7e-11 73.9 142 34.5
Manes.07G038100 Manihot esculenta HOM05D007310 ORTHO05D002375 1.7e-11 73.9 142 34.5
VMungo0251G1327 Vigna mungo HOM05D007310 ORTHO05D002375 1.7e-11 73.9 120 39.2
DCAR_021882 Daucus carota HOM05D007310 ORTHO05D002375 2.2e-11 73.6 201 30.3
FvH4_2g13500 Fragaria vesca HOM05D007310 ORTHO05D002375 2.2e-11 73.6 127 32.3
FAN24G3359 Fragaria x ananassa HOM05D007310 ORTHO05D004145 2.2e-11 73.6 127 32.3
Duzib248G0762 Durio zibethinus HOM05D007310 ORTHO05D002375 2.8e-11 73.2 117 42.7
Peaxi162Scf00299g00914 Petunia axillaris HOM05D007310 ORTHO05D002375 2.8e-11 73.2 116 31.0
Thecc.02G133200 Theobroma cacao HOM05D007310 ORTHO05D002375 2.8e-11 73.2 115 44.3
Carub.0003s2834 Capsella rubella HOM05D007310 ORTHO05D002375 3.7e-11 72.8 141 31.2
SGA_v2.0_scaffold14G07142 Striga asiatica HOM05D007310 ORTHO05D002375 6.3e-11 72.0 114 33.3
CARHR104210 Cardamine hirsuta HOM05D007310 ORTHO05D002375 1.4e-10 70.9 121 33.9
FAN27G1440 Fragaria x ananassa HOM05D007310 ORTHO05D002375 2.4e-10 70.1 127 34.6
RcHm_v2.0_Chr7g0236611 Rosa chinensis HOM05D007310 ORTHO05D002375 2.4e-10 70.1 128 38.3
Nitab4.5_0006625g0010 Nicotiana tabacum HOM05D007310 ORTHO05D002375 3.1e-10 69.7 125 36.8
Oeu022081.1 Olea europaea HOM05D007310 ORTHO05D002375 3.1e-10 69.7 146 32.9
CSS0047922 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 4.1e-10 69.3 123 39.8
Prupe.8G066300 Prunus persica HOM05D007310 ORTHO05D002375 4.1e-10 69.3 144 34.7
SalBow8G1210 Salvia bowleyana HOM05D007310 ORTHO05D002375 4.1e-10 69.3 126 32.5
CAN.G523.36 Capsicum annuum HOM05D007310 ORTHO05D002375 6.9e-10 68.6 116 31.0
MD05G1054900 Malus domestica HOM05D007310 ORTHO05D002375 6.9e-10 68.6 119 41.2
PGSC0003DMG400012536 Solanum tuberosum HOM05D007310 ORTHO05D002375 6.9e-10 68.6 117 29.9
QL11p023211 Quercus lobata HOM05D007310 ORTHO05D002375 9.1e-10 68.2 115 41.7
TPR.G2868 Trifolium pratense HOM05D007310 ORTHO05D002375 9.1e-10 68.2 120 35.8
AT2G14095 Arabidopsis thaliana HOM05D007310 ORTHO05D002375 1.2e-09 67.8 129 29.5
Rhsim05G0103200 Rhododendron simsii HOM05D007310 ORTHO05D002375 1.2e-09 67.8 156 34.6
Solyc01g105600.3 Solanum lycopersicum HOM05D007310 ORTHO05D002375 1.2e-09 67.8 114 30.7
TAR376G0136 Trochodendron aralioides HOM05D007310 ORTHO05D002375 1.2e-09 67.8 128 46.1
HanXRQChr10g0290991 Helianthus annuus HOM05D007310 ORTHO05D002375 1.5e-09 67.4 134 37.3
COL.COLO4_32323 Corchorus olitorius HOM05D007310 ORTHO05D002375 2.0e-09 67.0 128 35.9
Ca_18369_v3 Cicer arietinum L. HOM05D007310 ORTHO05D002375 2.6e-09 66.6 157 33.8
arahy.Tifrunner.gnm1.ann1.KVX74B Arachis hypogaea HOM05D007310 ORTHO05D002375 3.4e-09 66.2 137 35.0
arahy.Tifrunner.gnm1.ann1.U7VQVC Arachis hypogaea HOM05D007310 ORTHO05D002375 3.4e-09 66.2 137 35.0
Sopen01g048060 Solanum pennellii HOM05D007310 ORTHO05D002375 3.4e-09 66.2 114 29.8
TWI14G0938 Tripterygium wilfordii HOM05D007310 ORTHO05D002375 3.4e-09 66.2 134 34.3
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 5.9e-09 65.5 183 31.1
AUR62011722 Chenopodium quinoa HOM05D007310 ORTHO05D002375 5.9e-09 65.5 116 39.7
Medtr4g093820 Medicago truncatula HOM05D007310 ORTHO05D002375 5.9e-09 65.5 150 32.0
Duzib132G0922 Durio zibethinus HOM05D007310 ORTHO05D002375 7.7e-09 65.1 78 41.0
Nitab4.5_0000863g0020 Nicotiana tabacum HOM05D007310 ORTHO05D002375 7.7e-09 65.1 126 31.7
Aa31LG8G12500 Aethionema arabicum HOM05D007310 ORTHO05D002375 1.0e-08 64.7 78 42.3
Thhalv10022863m.g Eutrema salsugineum HOM05D007310 ORTHO05D002375 1.0e-08 64.7 98 36.7
ECA234G2182 Erigeron canadensis HOM05D007310 ORTHO05D002375 1.3e-08 64.3 173 32.9
AL3G45790 Arabidopsis lyrata HOM05D007310 ORTHO05D002375 1.7e-08 63.9 117 32.5
ECA247G1585 Erigeron canadensis HOM05D004728 ORTHO05D002375 1.7e-08 63.9 106 34.0
Psat7g100440 Pisum sativum HOM05D007310 ORTHO05D002375 2.2e-08 63.5 120 33.3
TAR625G1009 Trochodendron aralioides HOM05D007310 ORTHO05D002375 2.2e-08 63.5 107 33.6
GSVIVG01015685001 Vitis vinifera HOM05D007310 ORTHO05D002375 2.2e-08 63.5 223 27.4
Actinidia28038 Actinidia chinensis HOM05D007310 ORTHO05D002375 2.9e-08 63.2 145 36.6
Cpa.g.sc42.21 Carica papaya HOM05D007310 ORTHO05D002375 2.9e-08 63.2 159 32.1
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 3.8e-08 62.8 110 39.1
PGR142G1548 Punica granatum HOM05D007310 ORTHO05D002375 3.8e-08 62.8 116 41.4
Lj4g0014623 Lotus japonicus HOM05D007310 ORTHO05D002375 5.0e-08 62.4 145 35.2
AUR62012905 Chenopodium quinoa HOM05D007310 ORTHO05D002375 6.5e-08 62.0 116 37.9
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 8.5e-08 61.6 120 37.5
THA.LOC104804411 Tarenaya hassleriana HOM05D007310 ORTHO05D002375 8.5e-08 61.6 128 37.5
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 1.4e-07 60.8 112 39.3
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 1.4e-07 60.8 113 35.4
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 2.5e-07 60.1 105 39.0
Lj4A95G12 Lonicera japonica HOM05D004728 ORTHO05D002375 2.5e-07 60.1 124 36.3
MBI02_g10701_MAGBIO Magnolia biondii HOM05D007310 ORTHO05D002375 3.2e-07 59.7 113 52.2
HanXRQChr17g0556311 Helianthus annuus HOM05D004728 ORTHO05D002375 5.5e-07 58.9 120 36.7
Os10g0377000 Oryza sativa ssp. japonica HOM05D007310 ORTHO05D002375 5.5e-07 58.9 118 44.1
FAN15G0442 Fragaria x ananassa HOM05D007310 ORTHO05D002375 7.2e-07 58.5 127 35.4
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 9.4e-07 58.2 111 37.8
Hma1.2p1_1180F.1_g264660 Hydrangea macrophylla HOM05D004728 ORTHO05D002375 1.2e-06 57.8 107 39.3
TAR376G0070 Trochodendron aralioides HOM05D015253 ORTHO05D002375 1.2e-06 57.8 124 45.2
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 1.6e-06 57.4 122 36.1
Sabra16G0196000 Salix brachista HOM05D007310 ORTHO05D002375 1.6e-06 57.4 95 40.0
CANSAT01G0157 Cannabis sativa HOM05D004728 ORTHO05D002375 2.1e-06 57.0 112 38.4
Oeu045992.1 Olea europaea HOM05D004728 ORTHO05D002375 2.1e-06 57.0 113 48.7
MSTRG.1389 Avicennia marina HOM05D004728 ORTHO05D002375 2.7e-06 56.6 110 52.7
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 3.6e-06 56.2 153 29.4
Phvul.002G211100 Phaseolus vulgaris HOM05D007310 ORTHO05D002375 3.6e-06 56.2 120 35.0
ECA247G2878 Erigeron canadensis HOM05D004728 ORTHO05D002375 4.7e-06 55.8 119 34.5
RcHm_v2.0_Chr2g0112261 Rosa chinensis HOM05D004728 ORTHO05D002375 4.7e-06 55.8 121 36.4
Migut.L00163 Erythranthe guttata HOM05D004728 ORTHO05D002375 6.1e-06 55.5 108 26.9
Potri.017G050000 Populus trichocarpa HOM05D007310 ORTHO05D002375 6.1e-06 55.5 198 28.3


User provided reference genes

Program Settings