Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G3962 Papaver somniferum HOM05D008529 ORTHO05D010219 1.8e-152 542.7 306 100.0
PSO339G5611 Papaver somniferum HOM05D008529 ORTHO05D010219 1.8e-152 542.7 306 100.0
PSO478G1972 Papaver somniferum HOM05D008529 ORTHO05D010219 1.8e-152 542.7 306 100.0
PSO700G0127 Papaver somniferum HOM05D008529 ORTHO05D010219 1.8e-152 542.7 306 100.0
PSO832G0739 Papaver somniferum HOM05D008529 ORTHO05D010219 1.8e-152 542.7 306 100.0
PSO461G0058 Papaver somniferum HOM05D008529 ORTHO05D010219 3.9e-152 541.6 306 99.7
PSO384G4383 Papaver somniferum HOM05D008529 ORTHO05D010219 5.2e-152 541.2 306 99.7
PSO541G2562 Papaver somniferum HOM05D008529 ORTHO05D010219 6.7e-152 540.8 306 99.7
PSO384G0957 Papaver somniferum HOM05D008529 ORTHO05D010219 2.0e-151 539.3 306 99.3
PSO461G0064 Papaver somniferum HOM05D008529 ORTHO05D010219 2.0e-151 539.3 306 99.3
PSO133G0069 Papaver somniferum HOM05D008529 ORTHO05D010219 2.6e-151 538.9 306 99.3
PSO384G4172 Papaver somniferum HOM05D008529 ORTHO05D010219 5.7e-151 537.7 306 99.0
PSO782G5516 Papaver somniferum HOM05D008529 ORTHO05D010219 9.7e-151 537.0 306 93.5
PSO017G2861 Papaver somniferum HOM05D008529 ORTHO05D010219 1.7e-150 536.2 306 93.5
PSO210G0056 Papaver somniferum HOM05D008529 ORTHO05D010219 1.7e-150 536.2 306 93.5
PSO541G6160 Papaver somniferum HOM05D008529 ORTHO05D010219 1.7e-150 536.2 306 93.5
PSO832G3163 Papaver somniferum HOM05D008529 ORTHO05D010219 1.7e-150 536.2 306 93.5
PSO170G2488 Papaver somniferum HOM05D008529 ORTHO05D010219 3.7e-150 535.0 306 93.1
PSO210G5199 Papaver somniferum HOM05D008529 ORTHO05D010219 3.7e-150 535.0 306 93.1
PSO017G2108 Papaver somniferum HOM05D008529 ORTHO05D010219 4.8e-150 534.6 306 94.8
PSO063G4627 Papaver somniferum HOM05D008529 ORTHO05D010219 4.8e-150 534.6 306 93.1
PSO210G2338 Papaver somniferum HOM05D008529 ORTHO05D010219 6.3e-150 534.3 306 93.1
PSO384G0405 Papaver somniferum HOM05D008529 ORTHO05D010219 6.3e-150 534.3 306 93.1
PSO478G2872 Papaver somniferum HOM05D008529 ORTHO05D010219 6.3e-150 534.3 306 93.1
PSO541G3973 Papaver somniferum HOM05D008529 ORTHO05D010219 8.2e-150 533.9 306 93.1
PSO675G7323 Papaver somniferum HOM05D008529 ORTHO05D010219 8.2e-150 533.9 306 93.1
PSO210G6697 Papaver somniferum HOM05D008529 ORTHO05D010219 1.8e-149 532.7 302 98.7
PSO761G0228 Papaver somniferum HOM05D008529 ORTHO05D010219 1.8e-149 532.7 306 92.8
PSO541G0169 Papaver somniferum HOM05D008529 ORTHO05D010219 2.4e-149 532.3 306 92.8
PSO675G5337 Papaver somniferum HOM05D008529 ORTHO05D010219 5.3e-149 531.2 306 95.8
PSO063G7383 Papaver somniferum HOM05D008529 ORTHO05D010219 1.3e-147 526.6 302 94.4
PSO423G0120 Papaver somniferum HOM05D008529 ORTHO05D010219 9.1e-141 503.8 292 92.8
PSO541G0799 Papaver somniferum HOM05D008529 ORTHO05D010219 1.7e-139 499.6 306 87.9
PSO478G4936 Papaver somniferum HOM05D008529 ORTHO05D010219 5.5e-138 494.6 285 92.3
PSO386G0005 Papaver somniferum HOM05D008529 ORTHO05D010219 3.6e-137 491.9 283 92.6
PSO063G5131 Papaver somniferum HOM05D008529 ORTHO05D010219 4.4e-127 458.4 238 99.2
PSO724G0644 Papaver somniferum HOM05D008529 ORTHO05D010219 5.8e-111 404.8 208 99.0
PSO017G3549 Papaver somniferum HOM05D008529 ORTHO05D010219 1.9e-109 399.8 209 97.1
PSO761G0531 Papaver somniferum HOM05D008529 ORTHO05D010219 4.9e-102 375.2 190 99.5
PSO761G0474 Papaver somniferum HOM05D008529 ORTHO05D010219 2.4e-101 372.9 190 98.9
PSO339G4421 Papaver somniferum HOM05D008529 ORTHO05D010219 1.3e-99 367.1 187 98.9
PSO732G0541 Papaver somniferum HOM05D008529 ORTHO05D010219 2.1e-92 343.2 173 98.3
PSO478G4463 Papaver somniferum HOM05D008529 ORTHO05D010219 5.6e-74 282.0 181 82.3
PSO017G1082 Papaver somniferum HOM05D008529 ORTHO05D010219 3.0e-67 259.6 166 100.0
PSO170G6704 Papaver somniferum HOM05D008529 ORTHO05D010219 5.7e-66 255.4 166 88.6
PSO423G0183 Papaver somniferum HOM05D008529 ORTHO05D010219 5.7e-66 255.4 166 88.6
PSO675G1768 Papaver somniferum HOM05D008529 ORTHO05D010219 5.7e-66 255.4 166 88.6
PSO801G0719 Papaver somniferum HOM05D008529 ORTHO05D010219 5.7e-66 255.4 166 88.6
PSO170G6734 Papaver somniferum HOM05D008529 ORTHO05D010219 8.7e-59 231.5 113 99.1
PSO541G0326 Papaver somniferum HOM05D008529 ORTHO05D010219 1.3e-57 227.6 110 100.0
FAN05G2464 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.6e-15 87.8 314 26.1
FAN26G1874 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.6e-15 87.8 314 26.1
FAN09G0033 Fragaria x ananassa HOM05D007743 ORTHO05D004645 3.5e-15 86.7 314 25.8
FAN18G3916 Fragaria x ananassa HOM05D007743 ORTHO05D004645 3.5e-15 86.7 314 26.1
FAN08G2971 Fragaria x ananassa HOM05D007743 ORTHO05D004645 4.5e-15 86.3 314 25.8
RcHm_v2.0_Chr6g0260681 Rosa chinensis HOM05D008529 ORTHO05D010219 6.6e-14 82.4 315 26.3
FAN26G1586 Fragaria x ananassa HOM05D007743 ORTHO05D004645 8.6e-14 82.0 314 25.5
FvH4_2g02401 Fragaria vesca HOM05D007743 ORTHO05D010219 5.5e-13 79.3 311 25.7
CiPaw.14G121300 Carya illinoinensis HOM05D001576 ORTHO05D010219 8.0e-12 75.5 323 24.8
FAN09G3614 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.4e-11 74.7 317 26.2
Rhsim12G0031800 Rhododendron simsii HOM05D001576 ORTHO05D000401 6.8e-11 72.4 324 25.0
RcHm_v2.0_Chr2g0105031 Rosa chinensis HOM05D001576 ORTHO05D010219 2.6e-10 70.5 318 24.8
RcHm_v2.0_Chr7g0231991 Rosa chinensis HOM05D001576 ORTHO05D010219 2.6e-10 70.5 318 24.8
CiPaw.13G129900 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.4e-10 70.1 129 31.8
Hma1.2p1_0921F.1_g236870 Hydrangea macrophylla HOM05D001576 ORTHO05D010219 3.4e-10 70.1 298 24.5
Rhsim03G0135600 Rhododendron simsii HOM05D001576 ORTHO05D010219 9.8e-10 68.6 297 25.3
Rhsim05G0091700 Rhododendron simsii HOM05D001576 ORTHO05D000401 9.8e-10 68.6 326 24.5
Rhsim05G0092900 Rhododendron simsii HOM05D001576 ORTHO05D000401 9.8e-10 68.6 326 24.5
CiPaw.03G043000 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.9e-09 67.0 129 29.5
CiPaw.07G052000 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.9e-09 67.0 129 29.5
CiPaw.08G044500 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.9e-09 67.0 129 29.5
CiPaw.10G012800 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.9e-09 67.0 129 29.5
CiPaw.02G050500 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.3e-09 65.9 303 26.4
CANSAT01G3197 Cannabis sativa HOM05D001576 ORTHO05D010219 1.1e-08 65.1 303 23.4
FvH4_2g00671 Fragaria vesca HOM05D007743 ORTHO05D004645 1.8e-08 64.3 232 26.3
CiPaw.07G099700 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.4e-08 63.9 317 24.3
CiPaw.09G172800 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.2e-08 63.5 302 26.2
QL02p093127 Quercus lobata HOM05D001576 ORTHO05D000401 5.4e-08 62.8 301 27.9
CiPaw.14G031000 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.0e-08 62.4 302 26.5
TWI34G1527 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 7.0e-08 62.4 226 24.8
vmacro13746 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 7.0e-08 62.4 124 28.2
vmacro22863 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 7.0e-08 62.4 124 28.2
CSS0031528 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 9.2e-08 62.0 124 29.8
CiPaw.14G032000 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.2e-08 62.0 302 26.8
CiPaw.15G037700 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.2e-08 62.0 208 25.0
Rhsim01G0133600 Rhododendron simsii HOM05D001576 ORTHO05D010219 9.2e-08 62.0 232 25.9
vmacro04017 Vaccinium macrocarpon HOM05D009738 ORTHO05D011821 9.2e-08 62.0 252 26.6
CSS0014176 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D010219 1.2e-07 61.6 124 29.0
CSS0047725 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.2e-07 61.6 123 30.1
QL02p009469 Quercus lobata HOM05D001576 ORTHO05D000401 1.2e-07 61.6 303 23.1
RcHm_v2.0_Chr7g0200361 Rosa chinensis HOM05D003861 ORTHO05D003172 1.2e-07 61.6 193 23.8
CSS0004943 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.0e-07 60.8 124 29.8
CSS0005302 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.0e-07 60.8 305 27.9
CSS0014799 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.0e-07 60.8 305 27.9
CSS0015368 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.0e-07 60.8 305 27.9
CiPaw.01G307400 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.0e-07 60.8 209 23.9
CiPaw.08G115400 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.0e-07 60.8 129 28.7
CiPaw.08G134700 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.0e-07 60.8 209 23.9
Potri.010G014250 Populus trichocarpa HOM05D001576 ORTHO05D010219 2.0e-07 60.8 124 28.2
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 2.0e-07 60.8 303 27.7
Rhsim13G0212700 Rhododendron simsii HOM05D002367 ORTHO05D011821 2.0e-07 60.8 203 27.6
RcHm_v2.0_Chr5g0049061 Rosa chinensis HOM05D007743 ORTHO05D010219 2.7e-07 60.5 89 33.7
TWI74G0837 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.7e-07 60.5 201 24.4
CSS0012008 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.5e-07 60.1 305 27.9
CiPaw.05G126800 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.5e-07 60.1 306 21.9
FAN08G2536 Fragaria x ananassa HOM05D007743 ORTHO05D004645 3.5e-07 60.1 288 24.3
CiPaw.08G157400 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.6e-07 59.7 209 23.4
FvH4_1g29461 Fragaria vesca HOM05D007743 ORTHO05D010219 5.9e-07 59.3 210 26.7
PSO339G5938 Papaver somniferum HOM05D019271 ORTHO05D013620 5.9e-07 59.3 141 27.7
Atru.chr1.3225 Acer truncatum HOM05D001576 ORTHO05D010219 7.8e-07 58.9 95 32.6
CiPaw.03G181800 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.8e-07 58.9 306 23.5
CiPaw.14G032300 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.8e-07 58.9 156 25.6
CiPaw.11G197100 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.0e-06 58.5 215 25.1
Os06g0635500 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 1.0e-06 58.5 191 26.2
Os12g0169300 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 1.0e-06 58.5 311 23.5
Os12g0228500 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 1.0e-06 58.5 311 23.5
Rhsim09G0056800 Rhododendron simsii HOM05D001576 ORTHO05D010219 1.0e-06 58.5 232 23.7
DCAR_018612 Daucus carota HOM05D007592 ORTHO05D004645 1.3e-06 58.2 310 23.2
Manes.12G071166 Manihot esculenta HOM05D007743 ORTHO05D010219 1.3e-06 58.2 138 26.8
Rhsim08G0180400 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.3e-06 58.2 311 23.8
Zm00001eb283200 Zea mays HOM05D000011 ORTHO05D000157 1.3e-06 58.2 299 23.1
CiPaw.01G283500 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.7e-06 57.8 215 25.1
Manes.15G155750 Manihot esculenta HOM05D007743 ORTHO05D010219 1.7e-06 57.8 126 27.0
RcHm_v2.0_Chr2g0144051 Rosa chinensis HOM05D007743 ORTHO05D010219 1.7e-06 57.8 89 32.6
vmacro07382 Vaccinium macrocarpon HOM05D009738 ORTHO05D011821 1.7e-06 57.8 158 27.8
CiPaw.14G060500 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.3e-06 57.4 183 26.8
FvH4_7g00330 Fragaria vesca HOM05D003861 ORTHO05D003172 2.3e-06 57.4 214 25.2
HanXRQChr08g0232381 Helianthus annuus HOM05D001576 ORTHO05D000401 2.3e-06 57.4 325 28.9
Atru.chr5.2435 Acer truncatum HOM05D007743 ORTHO05D004645 2.9e-06 57.0 306 21.9
CiPaw.03G175800 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.9e-06 57.0 198 26.3
CiPaw.05G086200 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.9e-06 57.0 152 27.0
FvH4_3g23932 Fragaria vesca HOM05D011010 ORTHO05D012519 2.9e-06 57.0 243 24.3
FvH4_3g29014 Fragaria vesca HOM05D001576 ORTHO05D000401 2.9e-06 57.0 219 26.0
FvH4_7g13271 Fragaria vesca HOM05D001576 ORTHO05D000401 2.9e-06 57.0 308 23.7
CiPaw.13G033200 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.9e-06 56.6 152 27.0
CiPaw.13G160200 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.9e-06 56.6 152 27.0
FvH4_4g12912 Fragaria vesca HOM05D007743 ORTHO05D004645 3.9e-06 56.6 303 23.1
FAN03G2119 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.9e-06 56.6 310 24.2
Manes.09G090928 Manihot esculenta HOM05D007592 ORTHO05D004645 3.9e-06 56.6 131 27.5
Manes.14G157656 Manihot esculenta HOM05D007743 ORTHO05D010219 3.9e-06 56.6 134 26.9
QL10p048988 Quercus lobata HOM05D001576 ORTHO05D000401 3.9e-06 56.6 189 24.9
CSS0006547 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.0e-06 56.2 124 25.8
FAN02G1001 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.0e-06 56.2 156 23.1
FAN04G2392 Fragaria x ananassa HOM05D007743 ORTHO05D004645 5.0e-06 56.2 152 29.6
CiPaw.02G131900 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.6e-06 55.8 152 27.0
CiPaw.07G048000 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.6e-06 55.8 319 28.5
CiPaw.14G029000 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.6e-06 55.8 314 28.0
CiPaw.16G006000 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.6e-06 55.8 128 25.8
Os06g0660650 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 6.6e-06 55.8 103 30.1
Aqoxy1G02949 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 8.6e-06 55.5 159 25.2
CSS0004495 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 8.6e-06 55.5 132 25.8
CiPaw.01G110200 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.6e-06 55.5 199 24.6
CiPaw.14G108500 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.6e-06 55.5 319 28.5
CiPaw.15G112900 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.6e-06 55.5 240 24.2
Manes.13G090650 Manihot esculenta HOM05D007592 ORTHO05D004645 8.6e-06 55.5 196 25.0
QL05p011416 Quercus lobata HOM05D001576 ORTHO05D016378 8.6e-06 55.5 218 22.5
SGA_v2.0_scaffold167G38458 Striga asiatica HOM05D001576 ORTHO05D000401 8.6e-06 55.5 234 23.9


User provided reference genes

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