Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 2.5e-67 258.8 151 100.0
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 4.0e-65 251.5 152 98.0
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 1.3e-44 183.3 146 73.3
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 2.3e-44 182.6 148 75.0
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 3.0e-44 182.2 155 74.2
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 3.9e-44 181.8 147 76.2
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 5.1e-44 181.4 147 75.5
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 8.7e-44 180.6 146 71.9
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 1.1e-43 180.3 152 73.0
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 1.9e-43 179.5 147 74.1
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 3.3e-43 178.7 151 74.2
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 4.3e-43 178.3 155 70.3
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 7.4e-43 177.6 147 72.8
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 7.4e-43 177.6 146 75.3
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 9.6e-43 177.2 155 72.3
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 9.6e-43 177.2 151 71.5
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 1.3e-42 176.8 149 73.2
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 1.3e-42 176.8 150 70.0
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 1.6e-42 176.4 156 67.9
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 2.1e-42 176.0 140 75.0
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 2.1e-42 176.0 150 74.7
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 2.1e-42 176.0 147 74.8
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 2.8e-42 175.6 153 69.3
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 4.8e-42 174.9 147 74.1
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 6.3e-42 174.5 152 70.4
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 6.3e-42 174.5 152 71.7
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 8.2e-42 174.1 150 73.3
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 1.1e-41 173.7 149 70.5
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 1.4e-41 173.3 149 73.2
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 1.4e-41 173.3 152 70.4
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 1.8e-41 172.9 144 76.4
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 2.4e-41 172.6 152 69.7
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 3.1e-41 172.2 154 70.8
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 3.1e-41 172.2 148 70.9
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 3.1e-41 172.2 152 71.1
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 3.1e-41 172.2 126 79.4
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 4.1e-41 171.8 145 74.5
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 6.9e-41 171.0 149 71.1
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 6.9e-41 171.0 152 69.7
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 9.0e-41 170.6 149 71.1
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 1.2e-40 170.2 149 71.1
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 1.5e-40 169.9 151 72.8
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 1.5e-40 169.9 153 70.6
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 1.5e-40 169.9 153 70.6
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 2.6e-40 169.1 149 70.5
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 3.4e-40 168.7 152 71.1
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 4.5e-40 168.3 152 69.7
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 7.6e-40 167.5 147 73.5
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 1.0e-39 167.2 152 68.4
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 1.3e-39 166.8 158 68.4
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 1.3e-39 166.8 149 71.1
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 1.7e-39 166.4 147 72.8
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 2.2e-39 166.0 142 73.9
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 2.9e-39 165.6 147 70.7
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 3.8e-39 165.2 142 73.2
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 5.0e-39 164.9 147 72.1
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 1.1e-38 163.7 141 71.6
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 1.4e-38 163.3 151 71.5
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 1.4e-38 163.3 147 67.3
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 2.5e-38 162.5 147 70.7
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 2.5e-38 162.5 119 80.7
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 2.5e-38 162.5 148 70.9
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 2.5e-38 162.5 140 72.1
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 7.2e-38 161.0 149 69.8
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 7.2e-38 161.0 148 70.3
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 2.1e-37 159.5 145 70.3
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 4.6e-37 158.3 129 74.4
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 6.1e-37 157.9 150 67.3
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 6.1e-37 157.9 148 69.6
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 7.9e-37 157.5 147 68.0
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 1.3e-36 156.8 184 47.3
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 1.8e-36 156.4 140 70.0
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 1.8e-36 156.4 152 67.1
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 2.3e-36 156.0 140 70.0
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 2.3e-36 156.0 184 59.8
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 3.9e-36 155.2 140 70.0
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 3.9e-36 155.2 111 81.1
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 5.1e-36 154.8 134 66.4
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 5.1e-36 154.8 158 64.6
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 8.7e-36 154.1 140 70.0
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 1.5e-35 153.3 146 69.9
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 1.9e-35 152.9 115 74.8
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 9.7e-35 150.6 115 75.7
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 1.3e-34 150.2 148 66.9
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 4.8e-34 148.3 163 58.9
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 6.3e-34 147.9 143 66.4
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 6.3e-34 147.9 143 66.4
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 8.2e-34 147.5 143 66.4
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 8.2e-34 147.5 143 66.4
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 1.8e-33 146.4 189 55.6
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 9.1e-33 144.1 122 73.0
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 1.0e-31 140.6 142 63.4
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 6.5e-31 137.9 145 64.8
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 3.0e-28 129.0 125 66.4
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 3.9e-28 128.6 164 51.2
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 1.3e-26 123.6 165 46.1
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 8.2e-26 120.9 116 56.9
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 5.3e-25 118.2 145 45.5
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 9.1e-25 117.5 103 61.2
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 4.5e-24 115.2 119 52.9
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 1.2e-21 107.1 94 59.6
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 1.0e-20 104.0 87 63.2
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 6.3e-18 94.7 147 44.2
ATR0912G003 Amborella trichopoda HOM05D007166 ORTHO05D009039 5.7e-11 71.6 60 58.3
Hund05201 Selenicereus undatus HOM05D007166 ORTHO05D009039 7.5e-11 71.2 93 48.4
Aqoxy5G01769 Aquilegia oxysepala HOM05D007166 ORTHO05D009039 1.7e-10 70.1 93 43.0
EL10Ac4g08279 Beta vulgaris HOM05D007166 ORTHO05D009039 7.0e-09 64.7 69 52.2
MBI09_g08444_MAGBIO Magnolia biondii HOM05D007166 ORTHO05D009039 2.7e-08 62.8 91 39.6
Thecc.09G255600 Theobroma cacao HOM05D007166 ORTHO05D009039 3.5e-08 62.4 85 45.9


User provided reference genes

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