Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G9330 Papaver somniferum HOM05D006820 ORTHO05D008526 1.4e-125 453.0 226 100.0
PSO541G0178 Papaver somniferum HOM05D006820 ORTHO05D008526 1.6e-121 439.5 226 97.3
PSO017G7138 Papaver somniferum HOM05D006820 ORTHO05D008526 5.2e-109 397.9 226 87.6
Nn6g31730 Nelumbo nucifera HOM05D006820 ORTHO05D008526 7.1e-90 334.3 229 70.3
TAR625G0986 Trochodendron aralioides HOM05D006820 ORTHO05D008526 6.0e-89 331.3 229 71.2
Lj9A405G64 Lonicera japonica HOM05D006820 ORTHO05D008526 1.0e-88 330.5 229 71.6
CSS0042496 Camellia sinensis var. sinensis HOM05D006820 ORTHO05D008526 1.3e-88 330.1 229 71.6
Lsat_1_v5_gn_8_120400 Lactuca sativa HOM05D006820 ORTHO05D008526 6.6e-88 327.8 224 71.4
Manes.04G064800 Manihot esculenta HOM05D006820 ORTHO05D008526 8.1e-86 320.9 229 69.9
Ciclev10029216m.g Citrus clementina HOM05D006820 ORTHO05D008526 1.1e-85 320.5 228 72.8
Atru.chr5.3527 Acer truncatum HOM05D006820 ORTHO05D008526 1.4e-85 320.1 222 71.2
Aqoxy6G01707 Aquilegia oxysepala HOM05D006820 ORTHO05D008526 6.8e-85 317.8 222 72.5
Actinidia32013 Actinidia chinensis HOM05D006820 ORTHO05D008526 8.9e-85 317.4 229 69.9
vmacro17294 Vaccinium macrocarpon HOM05D006820 ORTHO05D008526 2.0e-84 316.2 229 68.6
GSVIVG01023895001 Vitis vinifera HOM05D006820 ORTHO05D008526 5.8e-84 314.7 224 70.1
Nitab4.5_0011212g0060 Nicotiana tabacum HOM05D006820 ORTHO05D008526 7.6e-84 314.3 224 67.4
HanXRQChr14g0459061 Helianthus annuus HOM05D006820 ORTHO05D008526 9.9e-84 313.9 229 69.4
Peaxi162Scf00362g00246 Petunia axillaris HOM05D006820 ORTHO05D008526 9.9e-84 313.9 223 70.0
Potri.009G165400 Populus trichocarpa HOM05D006820 ORTHO05D008526 9.9e-84 313.9 225 69.8
PGSC0003DMG400014660 Solanum tuberosum HOM05D006820 ORTHO05D008526 9.9e-84 313.9 224 67.9
Migut.B00016 Erythranthe guttata HOM05D006820 ORTHO05D008526 1.3e-83 313.5 225 69.3
CAN.G1725.10 Capsicum annuum HOM05D006820 ORTHO05D008526 2.2e-83 312.8 224 68.3
Gorai.008G040700 Gossypium raimondii HOM05D006820 ORTHO05D008526 2.9e-83 312.4 226 69.0
FvH4_2g16540 Fragaria vesca HOM05D006820 ORTHO05D008526 1.1e-82 310.5 221 70.6
CiPaw.06G118200 Carya illinoinensis HOM05D006820 ORTHO05D008526 1.4e-82 310.1 221 69.2
QL11p053925 Quercus lobata HOM05D006820 ORTHO05D008526 1.4e-82 310.1 239 67.4
Solyc01g112160.4 Solanum lycopersicum HOM05D006820 ORTHO05D008526 1.4e-82 310.1 229 65.9
Duzib132G0878 Durio zibethinus HOM05D006820 ORTHO05D008526 2.4e-82 309.3 229 68.1
PGR142G1762 Punica granatum HOM05D006820 ORTHO05D008526 2.4e-82 309.3 225 69.8
Thecc.02G045600 Theobroma cacao HOM05D006820 ORTHO05D008526 2.4e-82 309.3 224 68.3
Sopen01g054210 Solanum pennellii HOM05D006820 ORTHO05D008526 3.2e-82 308.9 229 65.5
Ah.01g007660 Amaranthus hybridus HOM05D006820 ORTHO05D008526 1.2e-81 307.0 219 67.1
FAN24G1561 Fragaria x ananassa HOM05D006820 ORTHO05D008526 1.2e-81 307.0 219 70.3
MD10G1138800 Malus domestica HOM05D006820 ORTHO05D008526 1.6e-81 306.6 224 66.5
AUR62012929 Chenopodium quinoa HOM05D006820 ORTHO05D008526 2.7e-81 305.8 229 66.8
SGA_v2.0_scaffold58G20319 Striga asiatica HOM05D006820 ORTHO05D008526 6.0e-81 304.7 232 65.9
CANSAT25G2916 Cannabis sativa HOM05D006820 ORTHO05D008526 7.8e-81 304.3 224 66.1
ECA233G1752 Erigeron canadensis HOM05D006820 ORTHO05D008526 1.0e-80 303.9 209 71.3
PSO170G2156 Papaver somniferum HOM05D006820 ORTHO05D008526 1.0e-80 303.9 170 85.9
DCAR_015665 Daucus carota HOM05D006820 ORTHO05D008526 1.3e-80 303.5 224 65.6
FAN15G1990 Fragaria x ananassa HOM05D006820 ORTHO05D008526 1.7e-80 303.1 221 68.3
Eucgr.I01511 Eucalyptus grandis HOM05D006820 ORTHO05D008526 6.6e-80 301.2 222 67.6
Prupe.8G177600 Prunus persica HOM05D006820 ORTHO05D008526 6.6e-80 301.2 224 67.4
AUR62011713 Chenopodium quinoa HOM05D006820 ORTHO05D008526 1.1e-79 300.4 228 66.2
FAN27G3410 Fragaria x ananassa HOM05D006820 ORTHO05D008526 1.5e-79 300.1 221 68.8
Aa31LG6G16790 Aethionema arabicum HOM05D006820 ORTHO05D008526 1.9e-79 299.7 221 64.3
Thhalv10004876m.g Eutrema salsugineum HOM05D006820 ORTHO05D008526 2.5e-79 299.3 221 66.1
BcaC01g00221 Brassica carinata HOM05D006820 ORTHO05D008526 3.3e-79 298.9 223 66.4
BcaC01g00229 Brassica carinata HOM05D006820 ORTHO05D008526 4.3e-79 298.5 224 67.4
Sp7g37400 Schrenkiella parvula HOM05D006820 ORTHO05D008526 4.3e-79 298.5 221 66.1
BraA08t34377Z Brassica rapa HOM05D000807 ORTHO05D000662 5.6e-79 298.1 222 66.7
unitig_0.g2740 Utricularia gibba HOM05D006820 ORTHO05D008526 5.6e-79 298.1 229 65.9
RcHm_v2.0_Chr6g0280561 Rosa chinensis HOM05D006820 ORTHO05D008526 9.6e-79 297.4 224 66.5
BolC3t19961H Brassica oleracea HOM05D000807 ORTHO05D000662 1.6e-78 296.6 223 66.4
THA.LOC104804082 Tarenaya hassleriana HOM05D006820 ORTHO05D008526 1.6e-78 296.6 221 63.3
PSO675G0855 Papaver somniferum HOM05D006820 ORTHO05D008526 2.1e-78 296.2 225 66.2
CsaV3_5G012520 Cucumis sativus L. HOM05D006820 ORTHO05D008526 2.8e-78 295.8 230 67.0
Phvul.008G291600 Phaseolus vulgaris HOM05D006820 ORTHO05D008526 2.8e-78 295.8 221 67.0
AL7G10240 Arabidopsis lyrata HOM05D006820 ORTHO05D008526 3.6e-78 295.4 218 65.1
Haze_02054 Corylus avellana HOM05D006820 ORTHO05D008526 3.6e-78 295.4 245 62.4
TWI79G0714 Tripterygium wilfordii HOM05D006820 ORTHO05D008526 3.6e-78 295.4 220 66.4
EL10Ac9g21258 Beta vulgaris HOM05D006820 ORTHO05D008526 4.8e-78 295.0 221 67.0
BraA08t34346Z Brassica rapa HOM05D006820 ORTHO05D008526 6.2e-78 294.7 223 65.9
Carub.0007s0026 Capsella rubella HOM05D006820 ORTHO05D008526 1.1e-77 293.9 219 65.3
PSO541G2729 Papaver somniferum HOM05D006820 ORTHO05D008526 2.4e-77 292.7 223 66.4
TPR.G18648 Trifolium pratense HOM05D006820 ORTHO05D008526 2.4e-77 292.7 223 64.6
Medtr5g099030 Medicago truncatula HOM05D006820 ORTHO05D008526 3.1e-77 292.4 223 65.0
AT4G38370 Arabidopsis thaliana HOM05D006820 ORTHO05D008526 4.0e-77 292.0 218 64.7
Sc18g0005950 Simmondsia chinensis HOM05D006820 ORTHO05D008526 4.0e-77 292.0 229 63.3
arahy.Tifrunner.gnm1.ann1.6J1J15 Arachis hypogaea HOM05D006820 ORTHO05D008526 6.9e-77 291.2 221 65.2
Hund06169 Selenicereus undatus HOM05D006820 ORTHO05D008526 1.5e-76 290.0 223 63.2
Glyma.14G001800 Glycine max HOM05D006820 ORTHO05D008526 4.4e-76 288.5 221 65.6
CARHR294110 Cardamine hirsuta HOM05D006820 ORTHO05D008526 1.7e-75 286.6 222 63.1
arahy.Tifrunner.gnm1.ann1.696HI2 Arachis hypogaea HOM05D006820 ORTHO05D008526 2.2e-75 286.2 221 64.3
RcHm_v2.0_Chr1g0329291 Rosa chinensis HOM05D006820 ORTHO05D008526 1.1e-74 283.9 225 64.9
LjContig00081g0000354 Lotus japonicus HOM05D006820 ORTHO05D008526 3.2e-74 282.3 221 63.8
ATR0661G540 Amborella trichopoda HOM05D006820 ORTHO05D008526 7.9e-73 277.7 219 63.9
CDE07G0154 Ceratophyllum demersum HOM05D006820 ORTHO05D008526 1.3e-72 276.9 224 62.1
Lalb_Chr10g0095311 Lupinus albus HOM05D006820 ORTHO05D008526 2.3e-72 276.2 221 62.0
FvH4_7g04340 Fragaria vesca HOM05D006820 ORTHO05D008526 5.1e-72 275.0 225 62.7
Gohir.A12G033700 Gossypium hirsutum HOM05D006820 ORTHO05D008526 4.3e-71 271.9 225 62.7
VMungo0647G2489 Vigna mungo HOM05D006820 ORTHO05D008526 4.3e-71 271.9 221 62.0
FAN01G0447 Fragaria x ananassa HOM05D006820 ORTHO05D008526 1.8e-69 266.5 243 58.4
FAN06G4449 Fragaria x ananassa HOM05D006820 ORTHO05D008526 2.0e-68 263.1 243 57.2
FAN03G3185 Fragaria x ananassa HOM05D006820 ORTHO05D008526 4.5e-68 261.9 243 57.6
Oeu021963.1 Olea europaea HOM05D006820 ORTHO05D008526 6.4e-67 258.1 219 62.1
Gohir.D12G038800 Gossypium hirsutum HOM05D006820 ORTHO05D008526 5.6e-63 245.0 169 70.4
Zm00001eb088270 Zea mays HOM05D006820 ORTHO05D008526 1.8e-61 240.0 234 54.7
Dinv41882 Davidia involucrata HOM05D006820 ORTHO05D008526 1.5e-60 236.9 147 77.6
Os04g0224600 Oryza sativa ssp. japonica HOM05D006820 ORTHO05D008526 1.5e-60 236.9 223 55.6
MELO3C022591.2 Cucumis melo HOM05D006820 ORTHO05D008526 3.8e-59 232.3 165 71.5
COL.COLO4_17938 Corchorus olitorius HOM05D006820 ORTHO05D008526 8.4e-59 231.1 165 70.9
Rhsim05G0047800 Rhododendron simsii HOM05D006820 ORTHO05D008526 1.9e-58 229.9 237 54.9
RhsimUnG0142100 Rhododendron simsii HOM05D006820 ORTHO05D008526 1.6e-57 226.9 237 54.4
SalBow1G3348 Salvia bowleyana HOM05D006820 ORTHO05D008526 1.6e-57 226.9 172 63.4
Sed0016165 Sechium edule HOM05D006820 ORTHO05D008526 3.0e-56 222.6 170 64.7
ClCG02G009990 Citrullus lanatus HOM05D006820 ORTHO05D008526 8.7e-56 221.1 171 64.9
Psat2g001280 Pisum sativum HOM05D006820 ORTHO05D008526 9.6e-55 217.6 168 63.7
AagrBONN_evm.TU.Sc2ySwM_344.5004 Anthoceros agrestis HOM05D006820 ORTHO05D008526 2.4e-53 213.0 227 48.9
SMO347G0521 Selaginella moellendorffii HOM05D006820 ORTHO05D008526 3.1e-53 212.6 220 52.3
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 1.2e-52 210.7 225 48.4
Pp3c6_22700 Physcomitrium patens HOM05D006820 ORTHO05D008526 2.9e-51 206.1 223 50.7
Mapoly0119s0027 Marchantia polymorpha HOM05D006820 ORTHO05D008526 1.4e-50 203.8 221 50.7
HPP92_025502 Vanilla planifolia HOM05D006820 ORTHO05D008526 8.7e-48 194.5 166 58.4
HPP92_025534 Vanilla planifolia HOM05D006820 ORTHO05D008526 7.4e-47 191.4 166 57.8
C03p77090 Brassica napus HOM05D000564 ORTHO05D002780 2.9e-43 179.5 117 70.1
A08p24230 Brassica napus HOM05D000564 ORTHO05D002780 3.2e-42 176.0 117 68.4
arahy.Tifrunner.gnm1.ann1.MXMJ8X Arachis hypogaea HOM05D006820 ORTHO05D008526 2.7e-41 172.9 144 60.4
CBR_g8644 Chara braunii HOM05D006820 ORTHO05D008526 7.9e-41 171.4 248 42.3
Cc09_g10680 Coffea canephora HOM05D006820 ORTHO05D008526 1.4e-34 150.6 108 65.7
MD10G1042800 Malus domestica HOM05D006820 ORTHO05D008526 4.7e-33 145.6 139 58.3
Cpa.g.sc20.200 Carica papaya HOM05D006820 ORTHO05D008526 6.1e-33 145.2 126 57.9
Cre13.g564000 Chlamydomonas reinhardtii HOM05D006820 ORTHO05D008526 1.1e-31 141.0 218 39.4
MD05G1133800 Malus domestica HOM05D006820 ORTHO05D008526 1.3e-30 137.5 149 51.0
CSS0041656 Camellia sinensis var. sinensis HOM05D006820 ORTHO05D008526 8.2e-30 134.8 127 57.5
arahy.Tifrunner.gnm1.ann1.JU0VI1 Arachis hypogaea HOM05D006820 ORTHO05D008526 1.0e-24 117.9 107 58.9
Cc00_g33760 Coffea canephora HOM05D006820 ORTHO05D008526 9.8e-15 84.7 52 76.9
Cc09_g10670 Coffea canephora HOM05D006820 ORTHO05D008526 9.8e-15 84.7 52 76.9
A09p68760 Brassica napus HOM05D006820 ORTHO05D008526 3.7e-14 82.8 92 47.8
BraA09t42215Z Brassica rapa HOM05D006820 ORTHO05D008526 3.7e-14 82.8 92 47.8
AUR62010100 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.9e-11 73.2 146 35.6
arahy.Tifrunner.gnm1.ann1.E18LML Arachis hypogaea HOM05D006820 ORTHO05D008526 7.2e-10 68.6 47 68.1


User provided reference genes

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