Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 5.2e-72 274.6 176 100.0
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 1.5e-66 256.5 180 94.4
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 2.0e-39 166.4 124 71.8
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 1.9e-37 159.8 124 69.4
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 3.2e-37 159.1 133 65.4
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 9.2e-37 157.5 133 65.4
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 9.2e-37 157.5 122 68.0
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 1.6e-36 156.8 137 62.0
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 2.7e-36 156.0 135 61.5
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 6.0e-36 154.8 131 67.2
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 2.3e-35 152.9 132 62.1
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 2.3e-35 152.9 129 63.6
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 3.9e-35 152.1 124 66.1
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 5.1e-35 151.8 134 59.0
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 5.1e-35 151.8 129 62.8
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 6.6e-35 151.4 129 61.2
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 6.6e-35 151.4 129 63.6
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 6.6e-35 151.4 120 64.2
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 1.1e-34 150.6 138 59.4
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 1.5e-34 150.2 129 62.8
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 1.9e-34 149.8 132 60.6
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 1.9e-34 149.8 132 60.6
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 1.9e-34 149.8 120 64.2
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 1.9e-34 149.8 120 63.3
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 3.3e-34 149.1 135 57.8
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 4.3e-34 148.7 136 57.4
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 4.3e-34 148.7 124 62.1
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 4.3e-34 148.7 131 60.3
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 5.6e-34 148.3 124 60.5
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 5.6e-34 148.3 120 61.7
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 7.3e-34 147.9 124 61.3
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 7.3e-34 147.9 131 60.3
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 7.3e-34 147.9 124 62.1
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 1.2e-33 147.1 140 57.9
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 1.2e-33 147.1 124 62.9
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 1.6e-33 146.7 124 62.1
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.6e-33 146.7 120 61.7
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 1.6e-33 146.7 131 59.5
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 2.8e-33 146.0 129 62.0
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 2.8e-33 146.0 120 62.5
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 3.6e-33 145.6 131 61.1
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 3.6e-33 145.6 124 60.5
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 3.6e-33 145.6 124 61.3
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 3.6e-33 145.6 124 62.1
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 4.7e-33 145.2 124 61.3
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 4.7e-33 145.2 136 58.8
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 4.7e-33 145.2 120 62.5
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 1.1e-32 144.1 113 62.8
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 1.1e-32 144.1 135 57.0
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 1.4e-32 143.7 111 63.1
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 1.4e-32 143.7 135 54.8
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 1.8e-32 143.3 132 56.1
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 3.1e-32 142.5 120 58.3
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 3.1e-32 142.5 124 58.9
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 4.0e-32 142.1 120 60.0
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 4.0e-32 142.1 120 59.2
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 5.2e-32 141.7 124 58.9
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 5.2e-32 141.7 127 58.3
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 5.2e-32 141.7 120 59.2
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 5.2e-32 141.7 120 59.2
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 1.2e-31 140.6 137 56.2
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 1.2e-31 140.6 120 60.0
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 1.2e-31 140.6 124 59.7
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 2.0e-31 139.8 124 57.3
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 4.4e-31 138.7 124 58.9
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 4.4e-31 138.7 120 60.0
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 4.4e-31 138.7 120 60.0
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 4.4e-31 138.7 109 64.2
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 5.8e-31 138.3 120 59.2
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 5.8e-31 138.3 120 60.0
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 9.9e-31 137.5 143 53.8
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 9.9e-31 137.5 124 57.3
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 4.9e-30 135.2 137 52.6
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 4.9e-30 135.2 120 59.2
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 6.4e-30 134.8 140 53.6
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 1.1e-29 134.0 133 54.1
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 1.1e-29 134.0 127 55.9
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 1.4e-29 133.7 136 50.7
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.4e-29 133.7 120 55.8
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.4e-29 133.7 120 55.8
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 1.9e-29 133.3 124 56.5
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 2.4e-29 132.9 124 56.5
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 2.4e-29 132.9 130 53.8
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 5.4e-29 131.7 124 54.8
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 7.1e-29 131.3 138 51.4
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 7.1e-29 131.3 138 50.7
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 9.2e-29 131.0 128 53.1
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 9.2e-29 131.0 128 53.1
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 9.2e-29 131.0 138 50.7
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 9.2e-29 131.0 138 50.7
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 3.5e-28 129.0 138 50.0
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 4.6e-28 128.6 136 55.1
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 4.6e-28 128.6 138 50.7
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 7.8e-28 127.9 129 55.0
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 1.0e-27 127.5 111 61.3
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.0e-27 127.5 134 53.7
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 1.3e-27 127.1 129 52.7
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 1.3e-27 127.1 134 54.5
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 2.3e-27 126.3 126 50.8
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 3.9e-27 125.6 134 54.5
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 5.1e-27 125.2 136 51.5
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 1.5e-26 123.6 114 57.0
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 1.5e-26 123.6 131 51.9
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 5.6e-26 121.7 137 48.2
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 5.6e-26 121.7 142 47.2
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 7.3e-26 121.3 195 43.6
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 9.6e-26 120.9 138 47.8
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 1.2e-25 120.6 126 49.2
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 4.7e-25 118.6 127 51.2
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 8.1e-25 117.9 151 44.4
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 1.1e-24 117.5 107 57.0
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 1.4e-24 117.1 138 47.8
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 5.2e-24 115.2 141 47.5
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 6.4e-22 108.2 76 69.7
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 6.4e-22 108.2 76 69.7
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 3.5e-20 102.4 86 65.1
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 1.6e-17 93.6 74 66.2
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 6.9e-16 88.2 114 41.2
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 1.3e-14 84.0 90 52.2
Cpa.g.sc1152.2 Carica papaya HOM05D006148 ORTHO05D007955 2.5e-10 69.7 70 55.7
Nitab4.5_0000500g0150 Nicotiana tabacum HOM05D006148 ORTHO05D007955 7.4e-10 68.2 78 55.1
AUR62010708 Chenopodium quinoa HOM05D006148 ORTHO05D007955 6.9e-08 61.6 126 31.7
AUR62027260 Chenopodium quinoa HOM05D006148 ORTHO05D007955 6.9e-08 61.6 126 31.7


User provided reference genes

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