Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G9248 Papaver somniferum HOM05D008002 ORTHO05D010148 3.2e-104 381.7 187 100.0
PSO541G1248 Papaver somniferum HOM05D008002 ORTHO05D010148 3.9e-94 348.2 216 83.3
Nn2g12628 Nelumbo nucifera HOM05D008002 ORTHO05D010148 2.9e-36 156.0 207 46.4
Nn8g40377 Nelumbo nucifera HOM05D008002 ORTHO05D010148 2.4e-35 152.9 209 45.9
TAR376G1088 Trochodendron aralioides HOM05D008002 ORTHO05D010148 1.7e-33 146.7 202 44.6
MD05G1143100 Malus domestica HOM05D008002 ORTHO05D010148 2.3e-30 136.3 198 46.0
Prupe.8G181900 Prunus persica HOM05D008002 ORTHO05D010148 6.8e-30 134.8 213 43.7
QL11p056798 Quercus lobata HOM05D000114 ORTHO05D009898 1.2e-29 134.0 126 56.3
MD10G1142900 Malus domestica HOM05D008002 ORTHO05D010148 2.6e-29 132.9 213 44.1
FvH4_2g17020 Fragaria vesca HOM05D008002 ORTHO05D010148 3.4e-29 132.5 206 42.7
FAN24G1487 Fragaria x ananassa HOM05D008002 ORTHO05D010148 3.4e-29 132.5 206 42.7
FAN27G2383 Fragaria x ananassa HOM05D008002 ORTHO05D010148 3.4e-29 132.5 206 43.2
Aqoxy6G02976 Aquilegia oxysepala HOM05D008002 ORTHO05D010148 5.8e-29 131.7 243 37.0
FAN15G1289 Fragaria x ananassa HOM05D008002 ORTHO05D010148 5.8e-29 131.7 215 42.3
Sed0014792 Sechium edule HOM05D008002 ORTHO05D010148 7.5e-29 131.3 212 40.6
RcHm_v2.0_Chr6g0281201 Rosa chinensis HOM05D008002 ORTHO05D010148 1.7e-28 130.2 215 41.9
CANSAT25G0111 Cannabis sativa HOM05D008002 ORTHO05D010148 2.9e-28 129.4 134 55.2
Haze_01969 Corylus avellana HOM05D008002 ORTHO05D010148 4.9e-28 128.6 121 57.0
MBI17_g13390_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 4.9e-28 128.6 131 51.1
MELO3C015697.2 Cucumis melo HOM05D008002 ORTHO05D010148 1.9e-27 126.7 125 52.0
Actinidia20583 Actinidia chinensis HOM05D008002 ORTHO05D010148 4.1e-27 125.6 125 52.0
CiPaw.05G094700 Carya illinoinensis HOM05D008002 ORTHO05D010148 5.4e-27 125.2 130 53.8
ClCG02G003270 Citrullus lanatus HOM05D008002 ORTHO05D010148 5.4e-27 125.2 125 51.2
CsaV3_7G002100 Cucumis sativus L. HOM05D008002 ORTHO05D010148 5.4e-27 125.2 125 51.2
Haze_01959 Corylus avellana HOM05D008002 ORTHO05D010148 9.2e-27 124.4 126 53.2
Actinidia17988 Actinidia chinensis HOM05D008002 ORTHO05D010148 1.2e-26 124.0 204 40.2
Eucgr.I01542 Eucalyptus grandis HOM05D008002 ORTHO05D010148 1.6e-26 123.6 127 51.2
CSS0003373 Camellia sinensis var. sinensis HOM05D008002 ORTHO05D010148 7.8e-26 121.3 126 50.8
Cfa005392 Carpinus fangiana HOM05D008002 ORTHO05D010148 7.8e-26 121.3 120 53.3
Dinv14183 Davidia involucrata HOM05D008002 ORTHO05D010148 7.8e-26 121.3 130 50.0
SEGI_35818 Sequoiadendron giganteum HOM05D008002 ORTHO05D010148 1.0e-25 120.9 126 50.8
GSVIVG01023858001 Vitis vinifera HOM05D008002 ORTHO05D010148 3.0e-25 119.4 129 53.5
Gohir.D13G057750 Gossypium hirsutum HOM05D008002 ORTHO05D010148 5.0e-25 118.6 133 48.1
TWI75G0824 Tripterygium wilfordii HOM05D008002 ORTHO05D010148 8.6e-25 117.9 125 50.4
Gorai.013G065000 Gossypium raimondii HOM05D008002 ORTHO05D010148 1.5e-24 117.1 133 47.4
Thecc.02G147800 Theobroma cacao HOM05D008002 ORTHO05D010148 1.5e-24 117.1 122 54.9
Gohir.D04G151600 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.9e-24 116.7 134 47.8
Sc08g0002060 Simmondsia chinensis HOM05D008002 ORTHO05D010148 2.5e-24 116.3 184 40.8
Gorai.012G138300 Gossypium raimondii HOM05D008002 ORTHO05D010148 3.3e-24 115.9 134 47.8
Duzib248G0441 Durio zibethinus HOM05D008002 ORTHO05D010148 4.3e-24 115.5 136 47.1
Sabra04G0140100 Salix brachista HOM05D008002 ORTHO05D010148 5.6e-24 115.2 135 49.6
CiPaw.06G114200 Carya illinoinensis HOM05D008002 ORTHO05D010148 7.3e-24 114.8 123 52.8
Hund00100 Selenicereus undatus HOM05D008002 ORTHO05D010148 7.3e-24 114.8 127 50.4
Gohir.D02G193300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.2e-23 114.0 132 48.5
Zm00001eb035270 Zea mays HOM05D008002 ORTHO05D010148 1.2e-23 114.0 133 43.6
ATR0763G180 Amborella trichopoda HOM05D008002 ORTHO05D010148 1.6e-23 113.6 122 51.6
Potri.009G169400 Populus trichocarpa HOM05D008002 ORTHO05D010148 1.6e-23 113.6 125 48.0
COL.COLO4_03847 Corchorus olitorius HOM05D008002 ORTHO05D010148 2.8e-23 112.8 124 53.2
Duzib132G1147 Durio zibethinus HOM05D008002 ORTHO05D010148 2.8e-23 112.8 199 38.2
Potri.004G208200 Populus trichocarpa HOM05D008002 ORTHO05D010148 2.8e-23 112.8 125 49.6
PGR142G3621 Punica granatum HOM05D008002 ORTHO05D010148 3.6e-23 112.5 132 47.7
Rhsim11G0198500 Rhododendron simsii HOM05D008002 ORTHO05D010148 4.7e-23 112.1 132 44.7
HanXRQChr15g0490081 Helianthus annuus HOM05D008002 ORTHO05D010148 8.1e-23 111.3 125 45.6
Lsat_1_v5_gn_3_48401 Lactuca sativa HOM05D008002 ORTHO05D010148 1.1e-22 110.9 128 46.9
Gohir.A03G170200 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.4e-22 110.5 132 46.2
Gohir.A04G111300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.4e-22 110.5 121 52.1
Gorai.005G216100 Gossypium raimondii HOM05D008002 ORTHO05D010148 1.8e-22 110.2 132 46.2
Atru.chr5.3576 Acer truncatum HOM05D008002 ORTHO05D010148 3.1e-22 109.4 129 44.2
MBI01_g17256_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 4.0e-22 109.0 104 55.8
Thhalv10027398m.g Eutrema salsugineum HOM05D008002 ORTHO05D010148 2.6e-21 106.3 125 47.2
TAR628G1479 Trochodendron aralioides HOM05D008002 ORTHO05D010148 4.4e-21 105.5 106 52.8
Ciclev10029829m.g Citrus clementina HOM05D008002 ORTHO05D010148 5.8e-21 105.1 125 47.2
Oeu006116.1 Olea europaea HOM05D008002 ORTHO05D010148 5.8e-21 105.1 209 37.8
Carub.0007s0013 Capsella rubella HOM05D008002 ORTHO05D010148 6.4e-20 101.7 125 44.8
MBI12_g13710_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 1.1e-19 100.9 106 51.9
MBI03_g24838_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 1.4e-19 100.5 148 43.2
Sp7g37530 Schrenkiella parvula HOM05D008002 ORTHO05D010148 1.4e-19 100.5 118 44.9
HPP92_007470 Vanilla planifolia HOM05D008002 ORTHO05D010148 1.4e-19 100.5 125 46.4
AT4G38213 Arabidopsis thaliana HOM05D008002 ORTHO05D010148 3.2e-19 99.4 121 44.6
Eucgr.H05000 Eucalyptus grandis HOM05D008002 ORTHO05D010148 9.2e-19 97.8 121 42.1
HanXRQChr15g0479771 Helianthus annuus HOM05D008002 ORTHO05D010148 1.6e-18 97.1 126 42.9
MBI18_g48147_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 8.6e-17 91.3 107 50.5
Os08g0512100 Oryza sativa ssp. japonica HOM05D008002 ORTHO05D010148 8.6e-17 91.3 136 40.4
CDE10G0514 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 1.1e-16 90.9 110 43.6
CDE10G0941 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 9.5e-16 87.8 104 44.2
AL7G10120 Arabidopsis lyrata HOM05D008002 ORTHO05D010148 8.6e-09 64.7 104 38.5
Gohir.A13G064166 Gossypium hirsutum HOM05D008002 ORTHO05D010148 2.5e-08 63.2 75 45.3
CARHR293990 Cardamine hirsuta HOM05D008002 ORTHO05D010148 2.8e-07 59.7 58 51.7


User provided reference genes

Program Settings