Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G9049 Papaver somniferum HOM05D005945 ORTHO05D006749 0.0e+00 1674.1 1020 100.0
PSO541G4169 Papaver somniferum HOM05D005945 ORTHO05D006749 0.0e+00 1569.7 1024 94.9
TAR376G0838 Trochodendron aralioides HOM05D005945 ORTHO05D006749 3.5e-72 277.7 1057 28.9
TAR628G0886 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.9e-62 245.4 313 48.2
Nn5g29549 Nelumbo nucifera HOM05D005945 ORTHO05D006749 1.7e-58 232.3 1103 26.7
GSVIVG01009690001 Vitis vinifera HOM05D005945 ORTHO05D006749 3.6e-48 198.0 283 42.8
MBI16_g17464_MAGBIO Magnolia biondii HOM05D005945 ORTHO05D006749 3.9e-47 194.5 300 43.3
Dinv39407 Davidia involucrata HOM05D005945 ORTHO05D006749 8.8e-47 193.4 377 37.4
TAR628G0416 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.5e-46 192.6 205 50.7
CSS0038834 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 1.3e-45 189.5 295 39.7
Potri.014G181200 Populus trichocarpa HOM05D005945 ORTHO05D006749 4.8e-45 187.6 366 36.1
CSS0001698 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 4.1e-44 184.5 390 34.9
Aqoxy6G01057 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 7.0e-44 183.7 240 47.9
COL.COLO4_26338 Corchorus olitorius HOM05D005945 ORTHO05D006749 3.8e-42 177.9 1104 24.8
QL02p007988 Quercus lobata HOM05D005945 ORTHO05D006749 8.5e-42 176.8 419 33.2
Actinidia15315 Actinidia chinensis HOM05D005945 ORTHO05D006749 1.1e-41 176.4 408 34.3
Nitab4.5_0000110g0520 Nicotiana tabacum HOM05D005945 ORTHO05D006749 1.5e-41 176.0 309 37.5
Lj4A42T73 Lonicera japonica HOM05D005945 ORTHO05D006749 3.2e-41 174.9 211 47.4
Cpa.g.sc64.76 Carica papaya HOM05D005945 ORTHO05D006749 5.5e-41 174.1 291 38.1
Thecc.08G024700 Theobroma cacao HOM05D005945 ORTHO05D006749 9.4e-41 173.3 381 37.0
Gohir.D06G008100 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.6e-40 172.6 396 36.9
Gorai.010G010800 Gossypium raimondii HOM05D005945 ORTHO05D006749 1.6e-40 172.6 396 36.9
Prupe.1G381200 Prunus persica HOM05D005945 ORTHO05D006749 1.6e-40 172.6 262 41.2
Eucgr.F01555 Eucalyptus grandis HOM05D005945 ORTHO05D006749 2.1e-40 172.2 306 38.2
Oeu056183.1 Olea europaea HOM05D005945 ORTHO05D006749 4.7e-40 171.0 267 41.2
Psat7g242000 Pisum sativum HOM05D005945 ORTHO05D006749 6.1e-40 170.6 257 40.5
Gohir.A06G010700 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.4e-39 169.5 325 38.5
Manes.05G161400 Manihot esculenta HOM05D005945 ORTHO05D006749 1.4e-39 169.5 357 35.6
PGSC0003DMG400005162 Solanum tuberosum HOM05D005945 ORTHO05D006749 8.8e-39 166.8 299 37.5
Nitab4.5_0003783g0040 Nicotiana tabacum HOM05D005945 ORTHO05D006749 1.2e-38 166.4 434 33.4
Haze_17984 Corylus avellana HOM05D005945 ORTHO05D006749 1.5e-38 166.0 404 33.2
Sc15g0006890 Simmondsia chinensis HOM05D005945 ORTHO05D006749 2.0e-38 165.6 286 39.2
Cfa018140 Carpinus fangiana HOM05D005945 ORTHO05D006749 3.3e-38 164.9 408 32.1
Sopen04g033790 Solanum pennellii HOM05D005945 ORTHO05D006749 3.3e-38 164.9 434 30.9
RcHm_v2.0_Chr6g0300761 Rosa chinensis HOM05D005945 ORTHO05D006749 4.4e-38 164.5 264 39.8
Duzib093G2051 Durio zibethinus HOM05D005945 ORTHO05D006749 7.5e-38 163.7 387 35.7
Solyc04g080200.4 Solanum lycopersicum HOM05D005945 ORTHO05D006749 7.5e-38 163.7 430 30.7
CiPaw.15G076000 Carya illinoinensis HOM05D005945 ORTHO05D006749 9.7e-38 163.3 306 34.3
Manes.18G028200 Manihot esculenta HOM05D005945 ORTHO05D006749 9.7e-38 163.3 367 33.8
MSTRG.25161 Avicennia marina HOM05D005945 ORTHO05D006749 1.3e-37 162.9 306 37.6
Os03g0594700 Oryza sativa ssp. japonica HOM05D005945 ORTHO05D006749 1.7e-37 162.5 302 38.1
Dinv36067 Davidia involucrata HOM05D005945 ORTHO05D006749 6.3e-37 160.6 219 45.7
arahy.Tifrunner.gnm1.ann1.Q0ZVI3 Arachis hypogaea HOM05D005945 ORTHO05D006749 2.4e-36 158.7 374 34.0
Hund26580 Selenicereus undatus HOM05D005945 ORTHO05D006749 3.1e-36 158.3 471 31.2
Sabra14G0141200 Salix brachista HOM05D005945 ORTHO05D006749 7.0e-36 157.1 377 32.4
THA.LOC104803244 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 7.0e-36 157.1 275 38.2
Glyma.03G071500 Glycine max HOM05D005945 ORTHO05D006749 9.1e-36 156.8 247 40.5
Lsat_1_v5_gn_1_17620 Lactuca sativa HOM05D005945 ORTHO05D006749 1.2e-35 156.4 270 38.1
Medtr4g019490 Medicago truncatula HOM05D005945 ORTHO05D006749 1.2e-35 156.4 265 37.0
Phvul.010G012000 Phaseolus vulgaris HOM05D005945 ORTHO05D006749 1.2e-35 156.4 254 39.8
Cc10_g03040 Coffea canephora HOM05D005945 ORTHO05D006749 1.6e-35 156.0 404 29.5
CANSAT25G3494 Cannabis sativa HOM05D005945 ORTHO05D006749 2.0e-35 155.6 462 29.7
MD08G1033800 Malus domestica HOM05D005945 ORTHO05D006749 4.5e-35 154.5 390 33.6
HPP92_021270 Vanilla planifolia HOM05D005945 ORTHO05D006749 4.5e-35 154.5 259 38.2
Lj3g0003314 Lotus japonicus HOM05D005945 ORTHO05D006749 5.9e-35 154.1 320 34.4
Migut.C00710 Erythranthe guttata HOM05D005945 ORTHO05D006749 3.8e-34 151.4 257 39.3
DCAR_008766 Daucus carota HOM05D005945 ORTHO05D006749 6.5e-34 150.6 295 34.6
Zm00001eb021170 Zea mays HOM05D005945 ORTHO05D006749 6.5e-34 150.6 259 39.4
MELO3C010931.2 Cucumis melo HOM05D005945 ORTHO05D006749 8.5e-34 150.2 236 41.1
FAN27G1966 Fragaria x ananassa HOM05D005945 ORTHO05D006749 8.5e-34 150.2 404 32.4
CsaV3_2G028570 Cucumis sativus L. HOM05D005945 ORTHO05D006749 2.5e-33 148.7 236 40.3
HanXRQChr04g0105591 Helianthus annuus HOM05D005945 ORTHO05D006749 2.5e-33 148.7 269 36.1
VMungo0331G0095 Vigna mungo HOM05D005945 ORTHO05D006749 2.5e-33 148.7 267 37.5
Zm00001eb404680 Zea mays HOM05D005945 ORTHO05D006749 3.2e-33 148.3 253 39.1
Sed0009733 Sechium edule HOM05D005945 ORTHO05D006749 4.2e-33 147.9 248 39.9
Glyma.01G104600 Glycine max HOM05D005945 ORTHO05D006749 7.2e-33 147.1 250 38.8
ECA247G0868 Erigeron canadensis HOM05D005945 ORTHO05D006749 1.2e-32 146.4 334 34.7
Atru.chr13.502 Acer truncatum HOM05D005945 ORTHO05D006749 2.7e-32 145.2 196 45.9
TPR.G32532 Trifolium pratense HOM05D005945 ORTHO05D006749 2.7e-32 145.2 329 33.1
Aqoxy4G01586 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 3.6e-32 144.8 292 38.4
Ca_03064_v3 Cicer arietinum L. HOM05D005945 ORTHO05D006749 3.6e-32 144.8 393 31.3
SGA_v2.0_scaffold326G48709 Striga asiatica HOM05D005945 ORTHO05D006749 8.0e-32 143.7 263 37.3
TWI12G1232 Tripterygium wilfordii HOM05D005945 ORTHO05D006749 8.0e-32 143.7 252 36.5
arahy.Tifrunner.gnm1.ann1.01TKSZ Arachis hypogaea HOM05D005945 ORTHO05D006749 1.0e-31 143.3 407 31.7
FvH4_2g39990 Fragaria vesca HOM05D005945 ORTHO05D006749 2.3e-31 142.1 403 31.3
FAN20G0334 Fragaria x ananassa HOM05D005945 ORTHO05D006749 2.3e-31 142.1 402 31.6
FAN15G0837 Fragaria x ananassa HOM05D005945 ORTHO05D006749 4.0e-31 141.4 403 30.3
Peaxi162Scf00690g00118 Petunia axillaris HOM05D005945 ORTHO05D006749 4.0e-31 141.4 408 28.7
ATR0618G067 Amborella trichopoda HOM05D005945 ORTHO05D006749 4.4e-30 137.9 162 48.8
Oeu036192.1 Olea europaea HOM05D005945 ORTHO05D006749 9.8e-30 136.7 282 35.5
Ah.11g043130 Amaranthus hybridus HOM05D005945 ORTHO05D006749 2.2e-29 135.6 321 32.4
AT3G56870 Arabidopsis thaliana HOM05D005945 ORTHO05D006749 2.2e-29 135.6 281 32.4
EL10Ac1g01817 Beta vulgaris HOM05D005945 ORTHO05D006749 3.7e-29 134.8 418 30.1
ClCG08G015230 Citrullus lanatus HOM05D005945 ORTHO05D006749 3.7e-29 134.8 381 31.2
AL5G38260 Arabidopsis lyrata HOM05D005945 ORTHO05D006749 1.4e-28 132.9 277 32.9
PGR031G1506 Punica granatum HOM05D005945 ORTHO05D006749 2.4e-28 132.1 405 30.6
Sp5g05720 Schrenkiella parvula HOM05D005945 ORTHO05D006749 3.5e-27 128.3 365 28.2
Carub.0005s2360 Capsella rubella HOM05D005945 ORTHO05D006749 5.9e-27 127.5 283 31.1
Lalb_Chr19g0125071 Lupinus albus HOM05D005945 ORTHO05D006749 5.9e-27 127.5 189 43.4
HanXRQChr04g0105581 Helianthus annuus HOM05D005945 ORTHO05D006749 7.7e-27 127.1 375 29.1
Thhalv10005811m.g Eutrema salsugineum HOM05D005945 ORTHO05D006749 2.9e-26 125.2 293 31.1
Aa31LG10G11720 Aethionema arabicum HOM05D005945 ORTHO05D006749 3.8e-26 124.8 292 31.2
BcaC07g39998 Brassica carinata HOM05D005945 ORTHO05D006749 5.0e-26 124.4 271 31.4
C08p32110 Brassica napus HOM05D005945 ORTHO05D006749 5.0e-26 124.4 271 31.4
Lalb_Chr03g0042671 Lupinus albus HOM05D005945 ORTHO05D006749 8.6e-26 123.6 239 35.6
AUR62038825 Chenopodium quinoa HOM05D005945 ORTHO05D006749 1.9e-25 122.5 239 38.5
BolC8t50829H Brassica oleracea HOM05D005945 ORTHO05D006749 5.5e-25 120.9 369 29.0
BcaC07g40112 Brassica carinata HOM05D005945 ORTHO05D006749 9.5e-25 120.2 257 33.1
A09p49740 Brassica napus HOM05D005945 ORTHO05D006749 9.5e-25 120.2 268 30.6
BraA09t40427Z Brassica rapa HOM05D005945 ORTHO05D006749 9.5e-25 120.2 268 30.6
AUR62043686 Chenopodium quinoa HOM05D005945 ORTHO05D006749 9.5e-25 120.2 350 31.7
MD15G1030400 Malus domestica HOM05D005945 ORTHO05D006749 9.5e-25 120.2 411 28.7
Sed0010063 Sechium edule HOM05D005945 ORTHO05D006749 1.2e-24 119.8 237 35.0
Aqoxy4G01559 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 1.6e-24 119.4 368 32.9
SEGI_34412 Sequoiadendron giganteum HOM05D057448 ORTHO05D006749 1.6e-24 119.4 163 44.2
Lj2g0002553 Lotus japonicus HOM05D005945 ORTHO05D006749 2.8e-24 118.6 320 31.9
CARHR167020 Cardamine hirsuta HOM05D005945 ORTHO05D006749 4.7e-24 117.9 368 30.2
Gohir.D02G094500 Gossypium hirsutum HOM05D005945 ORTHO05D006749 4.7e-24 117.9 259 34.0
Gorai.005G107400 Gossypium raimondii HOM05D005945 ORTHO05D006749 3.0e-23 115.2 259 34.0
vmacro21631 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 1.7e-21 109.4 139 43.2
Rhsim06G0034700 Rhododendron simsii HOM05D005945 ORTHO05D006749 6.3e-21 107.5 416 28.6
Actinidia22556 Actinidia chinensis HOM05D005945 ORTHO05D006749 4.5e-19 101.3 102 52.0
Ah.05g167400 Amaranthus hybridus HOM05D005945 ORTHO05D006749 1.2e-16 93.2 319 30.7
vmacro21630 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 8.9e-15 87.0 175 38.9
HPP92_021280 Vanilla planifolia HOM05D050438 ORTHO05D006749 1.5e-14 86.3 298 29.2
TAR381G0602 Trochodendron aralioides HOM05D005945 ORTHO05D006749 3.4e-14 85.1 170 37.6
CDE04G3738 Ceratophyllum demersum HOM05D060868 ORTHO05D006749 8.6e-10 70.5 96 38.5
AagrBONN_evm.TU.Sc2ySwM_344.3266 Anthoceros agrestis HOM05D005945 ORTHO05D006749 1.1e-09 70.1 170 28.8
CDE02G0146 Ceratophyllum demersum HOM05D060868 ORTHO05D006749 3.3e-09 68.6 292 27.7
Atru.chr13.504 Acer truncatum HOM05D005945 ORTHO05D006749 5.6e-09 67.8 378 26.2
SEGI_18222 Sequoiadendron giganteum HOM05D007138 ORTHO05D009148 1.4e-07 63.2 168 29.2
Sc18g0006320 Simmondsia chinensis HOM05D005945 ORTHO05D006749 2.3e-07 62.4 378 23.8
Lalb_Chr19g0125061 Lupinus albus HOM05D005945 ORTHO05D006749 7.5e-06 57.4 238 30.7


User provided reference genes

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