Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G9021 Papaver somniferum HOM05D003643 ORTHO05D005001 1.5e-297 1025.4 508 100.0
PSO017G1140 Papaver somniferum HOM05D003643 ORTHO05D005001 1.1e-226 790.0 409 96.6
Cfa023544 Carpinus fangiana HOM05D003643 ORTHO05D005001 6.7e-197 691.0 494 69.2
FAN21G1938 Fragaria x ananassa HOM05D003643 ORTHO05D005001 6.7e-197 691.0 489 69.7
TAR365G0076 Trochodendron aralioides HOM05D003643 ORTHO05D005001 8.7e-197 690.6 485 70.9
Cc09_g06330 Coffea canephora HOM05D003643 ORTHO05D005001 2.5e-196 689.1 488 69.7
RcHm_v2.0_Chr5g0019781 Rosa chinensis HOM05D003643 ORTHO05D005001 3.3e-196 688.7 489 70.1
Cpa.g.sc178.8 Carica papaya HOM05D003643 ORTHO05D005001 5.7e-196 688.0 491 69.7
FAN25G0143 Fragaria x ananassa HOM05D003643 ORTHO05D005001 5.7e-196 688.0 489 69.5
FvH4_3g12070 Fragaria vesca HOM05D003643 ORTHO05D005001 1.3e-195 686.8 489 69.3
Dinv35809 Davidia involucrata HOM05D003643 ORTHO05D005001 2.8e-195 685.6 490 70.0
Lj1C1143T1 Lonicera japonica HOM05D003643 ORTHO05D005001 1.8e-194 682.9 495 68.9
Actinidia22386 Actinidia chinensis HOM05D003643 ORTHO05D005001 3.1e-194 682.2 487 70.0
Aqoxy5G01635 Aquilegia oxysepala HOM05D003643 ORTHO05D005001 4.1e-194 681.8 501 69.9
vmacro11251 Vaccinium macrocarpon HOM05D003643 ORTHO05D005001 6.9e-194 681.0 508 67.7
Nn7g37591 Nelumbo nucifera HOM05D003643 ORTHO05D005001 9.0e-194 680.6 492 70.9
CSS0044821 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 5.0e-192 674.9 492 68.9
Potri.004G075600 Populus trichocarpa HOM05D003643 ORTHO05D005001 6.5e-192 674.5 500 67.4
Eucgr.D01040 Eucalyptus grandis HOM05D003643 ORTHO05D005001 2.5e-191 672.5 486 67.7
Glyma.07G222900 Glycine max HOM05D003643 ORTHO05D005001 5.5e-191 671.4 489 68.3
Prupe.4G109100 Prunus persica HOM05D003643 ORTHO05D005001 1.2e-190 670.2 497 68.0
GSVIVG01012096001 Vitis vinifera HOM05D003643 ORTHO05D005001 2.1e-190 669.5 484 69.2
Atru.chr1.1970 Acer truncatum HOM05D003643 ORTHO05D005001 3.6e-190 668.7 489 68.5
MD05G1254800 Malus domestica HOM05D003643 ORTHO05D005001 7.9e-190 667.5 495 68.1
PGR083G1065 Punica granatum HOM05D003643 ORTHO05D005001 2.3e-189 666.0 498 67.1
CiPaw.03G114100 Carya illinoinensis HOM05D003643 ORTHO05D005001 3.0e-189 665.6 507 66.7
MD10G1234900 Malus domestica HOM05D003643 ORTHO05D005001 3.9e-189 665.2 491 68.2
FAN16G1159 Fragaria x ananassa HOM05D003643 ORTHO05D005001 5.1e-189 664.8 489 68.1
CsaV3_1G046560 Cucumis sativus L. HOM05D003643 ORTHO05D005001 1.1e-188 663.7 484 67.4
Psat0s5231g0040 Pisum sativum HOM05D003643 ORTHO05D005001 1.1e-188 663.7 494 67.2
Glyma.20G021900 Glycine max HOM05D003643 ORTHO05D005001 9.7e-188 660.6 488 67.6
Lj1g0022937 Lotus japonicus HOM05D003643 ORTHO05D005001 2.2e-187 659.4 493 66.9
Lj1g0023184 Lotus japonicus HOM05D003643 ORTHO05D005001 2.8e-187 659.1 489 67.3
CANSAT21G2447 Cannabis sativa HOM05D003643 ORTHO05D005001 4.8e-187 658.3 490 67.8
Zm00001eb058120 Zea mays HOM05D003643 ORTHO05D005001 4.8e-187 658.3 498 66.1
Phvul.L009001 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 5.3e-186 654.8 491 67.2
BcaC04g19578 Brassica carinata HOM05D003643 ORTHO05D005001 6.9e-186 654.4 485 66.6
Psat6g043080 Pisum sativum HOM05D003643 ORTHO05D005001 6.9e-186 654.4 494 66.8
VMungo0251G0454 Vigna mungo HOM05D003643 ORTHO05D005001 9.1e-186 654.1 491 67.0
Lalb_Chr16g0385301 Lupinus albus HOM05D003643 ORTHO05D005001 1.2e-185 653.7 495 66.3
AL6G33500 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 1.5e-185 653.3 487 67.1
Phvul.L001601 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.5e-185 653.3 491 67.0
Sabra04G0050300 Salix brachista HOM05D003643 ORTHO05D005001 1.5e-185 653.3 500 66.2
Ca_18772_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 2.0e-185 652.9 497 65.6
TPR.G20995 Trifolium pratense HOM05D003643 ORTHO05D005001 2.0e-185 652.9 494 66.4
C09p54110 Brassica napus HOM05D003643 ORTHO05D005001 2.6e-185 652.5 485 66.4
BolC9t58281H Brassica oleracea HOM05D003643 ORTHO05D005001 2.6e-185 652.5 485 66.4
Phvul.003G000252 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 2.6e-185 652.5 477 68.3
THA.LOC104822105 Tarenaya hassleriana HOM05D003643 ORTHO05D005001 5.9e-185 651.4 495 65.5
TWI77G0757 Tripterygium wilfordii HOM05D003643 ORTHO05D005001 7.7e-185 651.0 484 67.6
AT5G22480 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 1.0e-184 650.6 487 67.1
Thhalv10013358m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 1.3e-184 650.2 487 66.3
A10p18340 Brassica napus HOM05D003643 ORTHO05D005001 1.7e-184 649.8 486 66.5
BraA10t43914Z Brassica rapa HOM05D003643 ORTHO05D005001 1.7e-184 649.8 486 66.5
Sed0017297 Sechium edule HOM05D003643 ORTHO05D005001 1.7e-184 649.8 493 65.9
MELO3C021772.2 Cucumis melo HOM05D003643 ORTHO05D005001 2.2e-184 649.4 486 66.5
Carub.0006s2022 Capsella rubella HOM05D003643 ORTHO05D005001 5.0e-184 648.3 486 66.5
Oeu060347.1 Olea europaea HOM05D003643 ORTHO05D005001 5.0e-184 648.3 483 66.5
BraA08t33014Z Brassica rapa HOM05D003643 ORTHO05D005001 6.5e-184 647.9 490 66.9
ATR0743G136 Amborella trichopoda HOM05D003643 ORTHO05D005001 8.5e-184 647.5 491 66.6
HanXRQChr14g0433091 Helianthus annuus HOM05D003643 ORTHO05D005001 1.4e-183 646.7 491 65.2
COL.COLO4_08070 Corchorus olitorius HOM05D003643 ORTHO05D005001 1.9e-183 646.4 529 62.2
BcaB01g04707 Brassica carinata HOM05D003643 ORTHO05D005001 2.5e-183 646.0 486 66.3
Thecc.04G162500 Theobroma cacao HOM05D003643 ORTHO05D005001 3.2e-183 645.6 490 65.5
A08p10150 Brassica napus HOM05D003643 ORTHO05D005001 4.2e-183 645.2 486 66.9
Migut.M01969 Erythranthe guttata HOM05D003643 ORTHO05D005001 4.2e-183 645.2 482 66.8
AL7G45920 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 5.5e-183 644.8 486 66.0
BcaB08g36427 Brassica carinata HOM05D003643 ORTHO05D005001 1.6e-182 643.3 495 65.1
A03p10790 Brassica napus HOM05D003643 ORTHO05D005001 1.6e-182 643.3 486 65.8
ECA238G3555 Erigeron canadensis HOM05D003643 ORTHO05D005001 2.1e-182 642.9 485 64.7
SpUn0005_0160 Schrenkiella parvula HOM05D003643 ORTHO05D005001 2.1e-182 642.9 486 66.0
AT5G37340 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 2.7e-182 642.5 486 66.7
HanXRQChr07g0189641 Helianthus annuus HOM05D003643 ORTHO05D005001 2.7e-182 642.5 480 66.5
Lsat_1_v5_gn_5_36401 Lactuca sativa HOM05D003643 ORTHO05D005001 3.6e-182 642.1 480 66.0
BcaC07g37705 Brassica carinata HOM05D003643 ORTHO05D005001 4.7e-182 641.7 489 66.3
CARHR215770 Cardamine hirsuta HOM05D003643 ORTHO05D005001 6.1e-182 641.3 486 66.0
CARHR191050 Cardamine hirsuta HOM05D003643 ORTHO05D005001 7.9e-182 641.0 486 65.6
Thhalv10027733m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 1.4e-181 640.2 486 65.6
MBI07_g18519_MAGBIO Magnolia biondii HOM05D003643 ORTHO05D005001 1.4e-181 640.2 490 67.1
Sopen02g018250 Solanum pennellii HOM05D003643 ORTHO05D005001 1.8e-181 639.8 500 64.0
Solyc02g069120.3 Solanum lycopersicum HOM05D003643 ORTHO05D005001 2.3e-181 639.4 500 63.8
CDE02G0779 Ceratophyllum demersum HOM05D003643 ORTHO05D005001 3.9e-181 638.6 485 66.2
PGSC0003DMG400010363 Solanum tuberosum HOM05D003643 ORTHO05D005001 5.1e-181 638.3 500 63.8
Gohir.D10G121400 Gossypium hirsutum HOM05D003643 ORTHO05D005001 2.0e-180 636.3 499 64.5
Gorai.011G133500 Gossypium raimondii HOM05D003643 ORTHO05D005001 2.0e-180 636.3 499 64.5
BcaC01g06578 Brassica carinata HOM05D003643 ORTHO05D005001 2.6e-180 636.0 487 65.1
Duzib268G1178 Durio zibethinus HOM05D003643 ORTHO05D005001 2.6e-180 636.0 497 64.8
Medtr4g083780 Medicago truncatula HOM05D003643 ORTHO05D005001 4.4e-180 635.2 489 64.6
Nitab4.5_0002056g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 5.7e-180 634.8 500 63.8
Sp6g22770 Schrenkiella parvula HOM05D003643 ORTHO05D005001 1.3e-179 633.6 486 66.3
HPP92_015903 Vanilla planifolia HOM05D003643 ORTHO05D005001 1.3e-179 633.6 493 65.1
SGA_v2.0_scaffold298G47674 Striga asiatica HOM05D003643 ORTHO05D005001 1.7e-179 633.3 499 64.5
BraA03t10388Z Brassica rapa HOM05D003643 ORTHO05D005001 2.2e-179 632.9 497 64.2
Pp3c15_5070 Physcomitrium patens HOM05D003643 ORTHO05D005001 2.2e-179 632.9 493 62.7
Sc22g0000430 Simmondsia chinensis HOM05D003643 ORTHO05D005001 2.2e-179 632.9 484 65.7
Mapoly0085s0072 Marchantia polymorpha HOM05D003643 ORTHO05D005001 6.3e-179 631.3 505 62.4
AUR62010551 Chenopodium quinoa HOM05D003643 ORTHO05D005001 8.2e-179 630.9 483 63.6
Rhsim04G0157300 Rhododendron simsii HOM05D003643 ORTHO05D005001 3.1e-178 629.0 524 62.6
Os08g0471900 Oryza sativa ssp. japonica HOM05D003643 ORTHO05D005001 5.3e-178 628.2 502 63.7
CAN.G1222.6 Capsicum annuum HOM05D003643 ORTHO05D005001 9.1e-178 627.5 500 63.4
DCAR_007797 Daucus carota HOM05D003643 ORTHO05D005001 1.2e-177 627.1 495 62.4
SalBow8G4557 Salvia bowleyana HOM05D003643 ORTHO05D005001 1.5e-177 626.7 484 65.7
SalBow8G5428 Salvia bowleyana HOM05D003643 ORTHO05D005001 1.5e-177 626.7 484 65.7
BcaB04g18097 Brassica carinata HOM05D003643 ORTHO05D005001 5.9e-177 624.8 483 65.4
BolC3t13712H Brassica oleracea HOM05D003643 ORTHO05D005001 1.0e-176 624.0 490 64.3
arahy.Tifrunner.gnm1.ann1.PVMC8E Arachis hypogaea HOM05D003643 ORTHO05D005001 1.2e-174 617.1 489 63.2
ECA246G0187 Erigeron canadensis HOM05D003643 ORTHO05D005001 1.8e-173 613.2 480 64.4
Lj1g0023481 Lotus japonicus HOM05D003643 ORTHO05D005001 1.1e-172 610.5 493 63.5
Hund14697 Selenicereus undatus HOM05D003643 ORTHO05D005001 2.8e-171 605.9 501 62.3
unitig_32.g11672 Utricularia gibba HOM05D003643 ORTHO05D005001 3.7e-171 605.5 486 63.0
SGA_v2.0_scaffold95G28766 Striga asiatica HOM05D003643 ORTHO05D005001 1.3e-168 597.0 519 59.7
Oeu052674.3 Olea europaea HOM05D003643 ORTHO05D005001 1.9e-167 593.2 457 65.2
Hund01937 Selenicereus undatus HOM05D003643 ORTHO05D005001 2.1e-166 589.7 485 61.9
AUR62017342 Chenopodium quinoa HOM05D003643 ORTHO05D005001 8.0e-166 587.8 577 53.2
Manes.01G122000 Manihot esculenta HOM05D003643 ORTHO05D005001 3.0e-165 585.9 500 62.6
Aa31LG9G17620 Aethionema arabicum HOM05D003643 ORTHO05D005001 2.0e-164 583.2 522 60.2
arahy.Tifrunner.gnm1.ann1.EU78CH Arachis hypogaea HOM05D003643 ORTHO05D005001 2.4e-162 576.2 489 60.5
Lsat_1_v5_gn_2_29841 Lactuca sativa HOM05D003643 ORTHO05D005001 1.2e-161 573.9 492 59.6
CSS0005005 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 3.0e-157 559.3 400 70.5
EL10Ac5g12673 Beta vulgaris HOM05D003643 ORTHO05D005001 4.0e-157 558.9 567 53.8
CBR_g6566 Chara braunii HOM05D003643 ORTHO05D005001 8.8e-157 557.8 514 55.8
TPR.G9485 Trifolium pratense HOM05D003643 ORTHO05D005001 2.6e-156 556.2 467 61.0
TPR.G20778 Trifolium pratense HOM05D003643 ORTHO05D005001 2.2e-155 553.1 489 57.7
SMO203G0021 Selaginella moellendorffii HOM05D003643 ORTHO05D005001 8.6e-152 541.2 455 58.7
Peaxi162Scf00128g01142 Petunia axillaris HOM05D003643 ORTHO05D005001 1.5e-151 540.4 498 58.0
Ca_20206_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 2.5e-151 539.7 489 56.2
CBR_g34896 Chara braunii HOM05D003643 ORTHO05D005001 8.0e-150 534.6 494 55.5
Nitab4.5_0002463g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 3.0e-149 532.7 497 57.5
Nitab4.5_0004569g0010 Nicotiana tabacum HOM05D003643 ORTHO05D005001 2.2e-139 500.0 507 54.6
Ciclev10003667m.g Citrus clementina HOM05D003643 ORTHO05D005001 7.3e-135 485.0 379 64.6
Phvul.003G000226 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.3e-131 474.2 341 69.2
Gohir.1Z049309 Gossypium hirsutum HOM05D003643 ORTHO05D005001 2.1e-129 466.8 352 65.3
Phvul.002G099300 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 8.6e-128 461.5 401 60.8
ClCG01G009340 Citrullus lanatus HOM05D003643 ORTHO05D005001 1.9e-127 460.3 359 63.8
QL07p008150 Quercus lobata HOM05D003643 ORTHO05D005001 6.2e-126 455.3 546 47.6
Ah.12g057940 Amaranthus hybridus HOM05D003643 ORTHO05D005001 1.8e-125 453.8 394 59.4
BolC8t48076H Brassica oleracea HOM05D003643 ORTHO05D005001 5.2e-125 452.2 358 64.5
Peaxi162Scf00149g01022 Petunia axillaris HOM05D003643 ORTHO05D005001 2.4e-122 443.4 362 62.2
CBR_g6568 Chara braunii HOM05D003643 ORTHO05D005001 6.0e-121 438.7 469 49.9
Gohir.1Z049318 Gossypium hirsutum HOM05D003643 ORTHO05D005001 1.1e-109 401.4 300 65.7
Haze_13620 Corylus avellana HOM05D003643 ORTHO05D005001 1.9e-106 390.6 275 69.5
C03p12370 Brassica napus HOM05D003643 ORTHO05D005001 4.3e-103 379.4 295 63.7
Phvul.003G000330 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 3.1e-101 373.2 272 68.0
Phvul.L001739 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 4.0e-101 372.9 420 50.5
Phvul.003G000304 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 8.4e-99 365.2 281 65.8
Cfa025656 Carpinus fangiana HOM05D003643 ORTHO05D005001 4.0e-85 319.7 474 40.1
Actinidia36045 Actinidia chinensis HOM05D003643 ORTHO05D005001 9.0e-85 318.5 236 65.3
Phvul.003G000278 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.8e-69 267.7 185 70.3
DCAR_017792 Daucus carota HOM05D003643 ORTHO05D005001 3.8e-67 260.0 204 64.7
SEGI_34727 Sequoiadendron giganteum HOM05D003643 ORTHO05D005001 3.2e-66 256.9 200 64.0
Atru.chr3.103 Acer truncatum HOM05D003643 ORTHO05D005001 3.6e-65 253.4 252 57.5
Phvul.L008901 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 3.1e-61 240.4 183 65.6
Psat3g171960 Pisum sativum HOM05D003643 ORTHO05D005001 1.0e-48 198.7 230 47.0
ClCG01G009350 Citrullus lanatus HOM05D003643 ORTHO05D005001 9.8e-47 192.2 124 72.6
Psat6g162200 Pisum sativum HOM05D003643 ORTHO05D005001 3.7e-46 190.3 266 41.7
BolC8t48075H Brassica oleracea HOM05D003643 ORTHO05D018815 2.0e-44 184.5 140 66.4
Lsat_1_v5_gn_5_36361 Lactuca sativa HOM05D003643 ORTHO05D018815 2.3e-40 171.0 133 63.9
Atru.chr8.2696 Acer truncatum HOM05D003643 ORTHO05D005001 6.8e-40 169.5 265 40.8
ATR0712G001 Amborella trichopoda HOM05D003643 ORTHO05D023464 2.6e-39 167.5 126 65.1
Atru.chr8.2585 Acer truncatum HOM05D003643 ORTHO05D005001 3.4e-39 167.2 154 61.0
CSS0009011 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 9.1e-37 159.1 115 71.3
Peaxi162Scf00149g01017 Petunia axillaris HOM05D003643 ORTHO05D018815 9.5e-34 149.1 131 57.3
CBR_g12037 Chara braunii HOM05D003643 ORTHO05D005001 8.0e-33 146.0 181 45.9
CSS0015856 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 2.9e-30 137.5 115 63.5
Phvul.L001639 Phaseolus vulgaris HOM05D003643 ORTHO05D034905 5.9e-28 129.8 91 65.9
Phvul.L008801 Phaseolus vulgaris HOM05D003643 ORTHO05D034905 5.9e-28 129.8 91 65.9
Lsat_1_v5_gn_5_135000 Lactuca sativa HOM05D003643 ORTHO05D005001 3.1e-24 117.5 97 63.9
Cc11_g00920 Coffea canephora HOM05D003643 ORTHO05D005001 3.4e-23 114.0 67 77.6
Haze_13621 Corylus avellana HOM05D003643 ORTHO05D018815 1.0e-19 102.4 65 73.8
CSS0030804 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 1.7e-19 101.7 65 72.3
Gohir.A10G145401 Gossypium hirsutum HOM05D003643 ORTHO05D018815 3.0e-19 100.9 68 69.1
CSS0024414 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 1.5e-18 98.6 65 69.2
ClCG01G009330 Citrullus lanatus HOM05D003643 ORTHO05D018815 1.5e-18 98.6 64 68.8
CSS0049868 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 4.3e-18 97.1 65 67.7
Psat0s3903g0040 Pisum sativum HOM05D003643 ORTHO05D005001 2.1e-17 94.7 65 72.3
CSS0023685 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D018815 2.8e-17 94.4 71 60.6
Lsat_1_v5_gn_5_54460 Lactuca sativa HOM05D003643 ORTHO05D005001 1.4e-16 92.0 188 35.6
CSS0012788 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 5.2e-16 90.1 77 59.7
Haze_13619 Corylus avellana HOM05D003643 ORTHO05D034905 1.1e-13 82.4 99 47.5
CSS0032340 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D018815 2.5e-10 71.2 46 63.0
HanXRQChr06g0180401 Helianthus annuus HOM05D003643 ORTHO05D005001 1.8e-08 65.1 37 70.3
Cre08.g372850 Chlamydomonas reinhardtii HOM05D059678 ORTHO05D044246 6.4e-06 56.6 120 33.3


User provided reference genes

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