Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 1.1e-195 686.4 328 100.0
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 2.5e-176 622.1 328 91.5
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 4.2e-160 568.2 327 80.7
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 5.5e-160 567.8 324 81.5
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 2.7e-159 565.5 326 82.5
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 5.2e-158 561.2 325 80.9
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 6.7e-158 560.8 324 79.9
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 3.3e-157 558.5 328 80.8
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 2.2e-156 555.8 322 79.2
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 1.4e-155 553.1 328 77.1
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 2.4e-155 552.4 326 78.5
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 2.2e-153 545.8 326 76.4
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 2.2e-153 545.8 327 77.1
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 5.0e-153 544.7 329 78.4
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 1.9e-152 542.7 328 77.4
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 5.5e-152 541.2 330 76.7
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 2.1e-151 539.3 328 75.6
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 1.0e-150 537.0 326 77.0
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 6.8e-150 534.3 328 74.7
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 1.5e-149 533.1 325 76.6
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 2.0e-149 532.7 328 76.2
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 2.6e-149 532.3 328 75.6
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 1.3e-148 530.0 325 74.5
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 2.2e-148 529.3 288 84.7
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 1.4e-147 526.6 326 75.2
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 1.4e-147 526.6 323 75.5
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 9.1e-147 523.9 326 75.2
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 3.5e-146 521.9 326 74.5
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 4.5e-146 521.5 326 74.5
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 1.7e-145 519.6 326 73.9
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 1.2e-143 513.5 288 80.2
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 4.0e-142 508.4 325 72.3
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 6.3e-140 501.1 326 72.4
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 8.3e-140 500.7 320 72.5
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 6.1e-135 484.6 328 70.7
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 1.0e-134 483.8 326 70.2
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 1.8e-134 483.0 334 69.8
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 3.0e-134 482.3 327 69.4
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 5.2e-134 481.5 286 77.3
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 5.2e-134 481.5 324 70.7
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 2.0e-133 479.6 328 70.1
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 5.7e-133 478.0 328 69.8
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 5.7e-133 478.0 322 69.9
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 9.8e-133 477.2 328 70.4
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 1.7e-132 476.5 322 68.0
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 1.4e-131 473.4 326 69.6
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 5.4e-131 471.5 328 69.8
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 9.2e-131 470.7 328 68.3
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 1.2e-130 470.3 327 68.8
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 1.2e-130 470.3 328 68.9
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 1.6e-130 469.9 328 67.4
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 2.0e-130 469.5 328 67.7
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 3.5e-130 468.8 330 67.6
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 4.6e-130 468.4 326 69.3
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 5.9e-130 468.0 328 68.0
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 5.9e-130 468.0 326 69.0
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 1.7e-129 466.5 328 66.5
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 3.0e-129 465.7 327 67.9
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 3.0e-129 465.7 327 68.5
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 3.0e-129 465.7 327 68.8
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 3.9e-129 465.3 326 68.4
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 1.5e-128 463.4 328 66.5
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 2.5e-128 462.6 328 67.7
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 9.5e-128 460.7 322 68.0
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 9.5e-128 460.7 327 67.6
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 1.6e-127 459.9 328 67.4
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 1.6e-127 459.9 327 66.7
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 2.1e-127 459.5 328 67.4
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 4.7e-127 458.4 326 66.9
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 4.7e-127 458.4 252 83.3
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 6.2e-127 458.0 328 66.8
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 8.0e-127 457.6 328 67.1
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 1.4e-126 456.8 328 66.8
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 1.5e-125 453.4 328 66.8
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 1.5e-125 453.4 324 66.7
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 3.4e-125 452.2 330 65.8
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 3.4e-125 452.2 328 65.2
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 5.8e-125 451.4 328 67.7
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 5.8e-125 451.4 328 66.5
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 5.8e-125 451.4 321 66.0
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 2.9e-124 449.1 328 65.9
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 4.9e-124 448.4 328 65.5
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 6.4e-124 448.0 260 80.4
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 2.4e-123 446.0 327 65.4
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 3.2e-123 445.7 327 65.7
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 1.2e-122 443.7 325 65.2
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 2.0e-122 443.0 369 59.3
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 4.6e-122 441.8 327 64.2
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 4.6e-122 441.8 327 64.5
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.0e-121 440.7 327 64.2
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 6.6e-121 438.0 332 63.3
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 1.1e-120 437.2 332 64.2
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 1.2e-119 433.7 326 63.8
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 9.8e-117 424.1 327 62.1
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 1.7e-116 423.3 242 80.6
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 3.7e-116 422.2 246 81.3
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 6.6e-113 411.4 320 61.6
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 3.0e-105 386.0 328 57.9
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 5.1e-105 385.2 311 60.5
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 1.5e-101 373.6 328 55.8
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 7.3e-96 354.8 322 55.3
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 1.8e-94 350.1 261 66.7
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 2.6e-93 346.3 228 72.8
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 1.9e-91 340.1 263 63.5
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 3.5e-90 335.9 374 45.2
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 3.9e-89 332.4 279 60.6
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 1.8e-81 307.0 249 60.6
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 2.4e-78 296.6 247 60.3
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 2.4e-70 270.0 247 51.8
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 2.0e-69 266.9 330 40.6
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 1.4e-59 234.2 191 60.7
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 1.4e-57 227.6 138 75.4
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 2.6e-56 223.4 189 55.0
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 1.9e-51 207.2 123 74.0
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 4.7e-50 202.6 126 72.2
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 1.2e-40 171.4 94 79.8
CBR_g40511 Chara braunii HOM05D000019 ORTHO05D000002 3.2e-27 126.7 153 47.1
GSVIVG01038121001 Vitis vinifera HOM05D006600 ORTHO05D008446 3.2e-27 126.7 89 68.5
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 7.3e-19 99.0 87 59.8
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 5.7e-16 89.4 83 51.8
Dinv39240 Davidia involucrata HOM05D006600 ORTHO05D008446 4.0e-09 66.6 97 41.2
Actinidia08259 Actinidia chinensis HOM05D006600 ORTHO05D008446 7.5e-08 62.4 53 52.8
Prupe.6G259700 Prunus persica HOM05D037056 ORTHO05D335045 1.4e-06 58.2 37 75.7
Prupe.1G327800 Prunus persica HOM05D037056 ORTHO05D335556 3.2e-06 57.0 37 75.7
MELO3C023799.2 Cucumis melo HOM05D006600 ORTHO05D168989 4.1e-06 56.6 73 46.6
Prupe.8G103600 Prunus persica HOM05D037056 ORTHO05D336041 9.2e-06 55.5 37 73.0


User provided reference genes

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