Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G8740 Papaver somniferum HOM05D007936 ORTHO05D009941 3.4e-180 634.8 300 100.0
Lj2g0010426 Lotus japonicus HOM05D007936 ORTHO05D009941 1.1e-45 188.0 313 35.5
PSO541G5394 Papaver somniferum HOM05D007936 ORTHO05D009941 1.2e-41 174.5 306 33.3
AUR62043866 Chenopodium quinoa HOM05D007936 ORTHO05D009941 3.6e-41 172.9 317 34.1
HPP92_003837 Vanilla planifolia HOM05D007936 ORTHO05D009941 8.1e-41 171.8 315 34.6
Mapoly0013s0006 Marchantia polymorpha HOM05D007936 ORTHO05D009941 5.2e-40 169.1 312 36.2
Migut.N02815 Erythranthe guttata HOM05D007936 ORTHO05D009941 6.8e-40 168.7 314 33.4
EL10Ac6g15030 Beta vulgaris HOM05D007936 ORTHO05D009941 2.6e-39 166.8 314 32.5
Hma1.2p1_0085F.1_g044400 Hydrangea macrophylla HOM05D007936 ORTHO05D009941 2.6e-39 166.8 313 33.9
Dinv40216 Davidia involucrata HOM05D007936 ORTHO05D009941 3.4e-39 166.4 310 33.5
AUR62018032 Chenopodium quinoa HOM05D007936 ORTHO05D009941 4.4e-39 166.0 295 33.6
Manes.12G073200 Manihot esculenta HOM05D007936 ORTHO05D009941 4.4e-39 166.0 323 33.7
Sc03g0004100 Simmondsia chinensis HOM05D007936 ORTHO05D009941 4.4e-39 166.0 309 33.3
Glyma.01G156800 Glycine max HOM05D007936 ORTHO05D009941 5.8e-39 165.6 312 34.0
Medtr5g024810 Medicago truncatula HOM05D007936 ORTHO05D009941 7.5e-39 165.2 311 32.2
SEGI_11766 Sequoiadendron giganteum HOM05D007936 ORTHO05D009941 9.8e-39 164.9 313 33.9
Os06g0622000 Oryza sativa ssp. japonica HOM05D007936 ORTHO05D009941 2.2e-38 163.7 316 33.2
TPR.G33764 Trifolium pratense HOM05D007936 ORTHO05D009941 2.2e-38 163.7 311 32.2
TAR628G0366 Trochodendron aralioides HOM05D007936 ORTHO05D009941 2.9e-38 163.3 304 34.5
Cc07_g12180 Coffea canephora HOM05D007936 ORTHO05D009941 4.9e-38 162.5 316 32.3
AagrBONN_evm.TU.Sc2ySwM_117.1848 Anthoceros agrestis HOM05D007936 ORTHO05D009941 6.4e-38 162.2 309 34.3
Lj2g0018393 Lotus japonicus HOM05D007936 ORTHO05D009941 6.4e-38 162.2 323 31.6
Manes.02G116400 Manihot esculenta HOM05D007936 ORTHO05D009941 6.4e-38 162.2 310 34.2
Nn6g31629 Nelumbo nucifera HOM05D007936 ORTHO05D009941 8.3e-38 161.8 310 33.5
GSVIVG01026447001 Vitis vinifera HOM05D007936 ORTHO05D009941 8.3e-38 161.8 314 33.8
TAR376G0578 Trochodendron aralioides HOM05D007936 ORTHO05D009941 1.1e-37 161.4 305 33.1
VMungo1215G1964 Vigna mungo HOM05D007936 ORTHO05D009941 1.1e-37 161.4 309 32.7
Solyc02g082290.4 Solanum lycopersicum HOM05D007936 ORTHO05D009941 1.4e-37 161.0 304 33.6
Sopen02g026950 Solanum pennellii HOM05D007936 ORTHO05D009941 4.1e-37 159.5 304 33.2
Peaxi162Scf00677g00217 Petunia axillaris HOM05D007936 ORTHO05D009941 5.4e-37 159.1 299 34.1
MBI01_g28402_MAGBIO Magnolia biondii HOM05D007936 ORTHO05D009941 1.2e-36 157.9 305 30.8
Lsat_1_v5_gn_8_114360 Lactuca sativa HOM05D007936 ORTHO05D009941 1.6e-36 157.5 317 31.5
CSS0005783 Camellia sinensis var. sinensis HOM05D007936 ORTHO05D009941 2.7e-36 156.8 318 30.8
CANSAT80G1444 Cannabis sativa HOM05D007936 ORTHO05D009941 2.7e-36 156.8 305 33.1
Atru.chr3.57 Acer truncatum HOM05D007936 ORTHO05D009941 4.6e-36 156.0 311 32.8
Aqoxy6G02990 Aquilegia oxysepala HOM05D007936 ORTHO05D009941 4.6e-36 156.0 305 32.1
CAN.G1428.9 Capsicum annuum HOM05D007936 ORTHO05D009941 6.0e-36 155.6 304 33.2
Potri.011G144500 Populus trichocarpa HOM05D007936 ORTHO05D009941 7.8e-36 155.2 310 32.6
arahy.Tifrunner.gnm1.ann1.EI5XL4 Arachis hypogaea HOM05D007936 ORTHO05D009941 1.3e-35 154.5 311 30.2
arahy.Tifrunner.gnm1.ann1.YI11AC Arachis hypogaea HOM05D007936 ORTHO05D009941 1.3e-35 154.5 311 30.2
Sabra11G0129500 Salix brachista HOM05D007936 ORTHO05D009941 1.3e-35 154.5 325 31.4
Nitab4.5_0000855g0100 Nicotiana tabacum HOM05D007936 ORTHO05D009941 2.3e-35 153.7 296 33.4
Phvul.002G118800 Phaseolus vulgaris HOM05D007936 ORTHO05D009941 6.6e-35 152.1 309 32.0
HanXRQChr09g0259061 Helianthus annuus HOM05D007936 ORTHO05D009941 1.1e-34 151.4 312 31.1
Hund03585 Selenicereus undatus HOM05D007936 ORTHO05D009941 1.1e-34 151.4 307 31.9
Psat2g147560 Pisum sativum HOM05D007936 ORTHO05D009941 2.5e-34 150.2 315 31.1
Ciclev10025023m.g Citrus clementina HOM05D007936 ORTHO05D009941 3.6e-33 146.4 314 32.2
Zm00001eb388070 Zea mays HOM05D007936 ORTHO05D009941 3.6e-33 146.4 313 30.7
Ca_24997_v3 Cicer arietinum L. HOM05D007936 ORTHO05D009941 4.0e-32 142.9 334 31.4
Nitab4.5_0011596g0020 Nicotiana tabacum HOM05D007936 ORTHO05D009941 1.5e-31 141.0 278 33.8
AUR62003721 Chenopodium quinoa HOM05D007936 ORTHO05D009941 4.4e-31 139.4 303 31.0
Lj2A505T18 Lonicera japonica HOM05D007936 ORTHO05D009941 4.4e-31 139.4 285 32.6
PSO017G3590 Papaver somniferum HOM05D007936 ORTHO05D009941 9.2e-29 131.7 205 36.1
SalBow2G0997 Salvia bowleyana HOM05D007936 ORTHO05D009941 9.2e-29 131.7 316 29.4
SHI19273 Sapria himalayana HOM05D007936 ORTHO05D009941 2.5e-26 123.6 312 29.8
PSO541G0385 Papaver somniferum HOM05D007936 ORTHO05D009941 3.3e-26 123.2 266 33.1
AUR62016578 Chenopodium quinoa HOM05D007936 ORTHO05D009941 2.1e-25 120.6 241 33.6
Oeu049742.1 Olea europaea HOM05D007936 ORTHO05D009941 4.7e-25 119.4 244 33.2
PSO675G7167 Papaver somniferum HOM05D007936 ORTHO05D009941 6.9e-24 115.5 231 32.5
SEGI_25295 Sequoiadendron giganteum HOM05D007936 ORTHO05D009941 6.9e-24 115.5 250 31.6
Pp3c11_11810 Physcomitrium patens HOM05D007936 ORTHO05D009941 3.4e-23 113.2 322 28.6
PSO478G1225 Papaver somniferum HOM05D007936 ORTHO05D009941 8.4e-22 108.6 252 31.7
SGA_v2.0_scaffold28G11852 Striga asiatica HOM05D007936 ORTHO05D009941 5.4e-21 105.9 203 31.5
CBR_g4051 Chara braunii HOM05D000505 ORTHO05D001303 7.1e-21 105.5 178 33.7
ATR0605G066 Amborella trichopoda HOM05D007936 ORTHO05D009941 1.0e-19 101.7 161 37.9
SEGI_16592 Sequoiadendron giganteum HOM05D007936 ORTHO05D009941 1.4e-16 91.3 170 31.2
SEGI_18967 Sequoiadendron giganteum HOM05D007936 ORTHO05D009941 1.8e-16 90.9 151 33.1
SEGI_34584 Sequoiadendron giganteum HOM05D007936 ORTHO05D009941 1.8e-16 90.9 151 33.1
SEGI_24056 Sequoiadendron giganteum HOM05D007936 ORTHO05D009941 3.1e-16 90.1 156 35.3
SEGI_12341 Sequoiadendron giganteum HOM05D007936 ORTHO05D009941 1.5e-15 87.8 134 35.1


User provided reference genes

Program Settings