Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G8574 Papaver somniferum HOM05D006880 ORTHO05D008638 5.1e-102 374.4 186 100.0
PSO541G1054 Papaver somniferum HOM05D006880 ORTHO05D008638 2.5e-101 372.1 186 99.5
ECA247G1470 Erigeron canadensis HOM05D006880 ORTHO05D008638 3.1e-83 312.0 189 82.5
Oeu054906.1 Olea europaea HOM05D006880 ORTHO05D008638 3.1e-83 312.0 183 83.6
HanXRQChr02g0039401 Helianthus annuus HOM05D006880 ORTHO05D008638 2.0e-82 309.3 189 81.5
Aqoxy5G02095 Aquilegia oxysepala HOM05D006880 ORTHO05D008638 1.4e-80 303.1 186 81.7
TAR628G0678 Trochodendron aralioides HOM05D006880 ORTHO05D008638 1.4e-80 303.1 191 79.1
Nn1g06089 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.2e-79 300.1 186 81.7
RcHm_v2.0_Chr2g0119191 Rosa chinensis HOM05D006880 ORTHO05D008638 1.6e-79 299.7 191 80.6
FvH4_1g23610 Fragaria vesca HOM05D006880 ORTHO05D008638 2.1e-79 299.3 191 80.6
FAN28G1236 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.1e-79 299.3 191 80.6
FAN23G3120 Fragaria x ananassa HOM05D006880 ORTHO05D008638 3.5e-79 298.5 191 80.6
Gohir.A10G083300 Gossypium hirsutum HOM05D006880 ORTHO05D008638 4.6e-79 298.1 191 80.1
Gohir.D10G105600 Gossypium hirsutum HOM05D006880 ORTHO05D008638 4.6e-79 298.1 191 80.1
Prupe.6G162500 Prunus persica HOM05D006880 ORTHO05D008638 6.0e-79 297.7 190 78.9
FAN19G0460 Fragaria x ananassa HOM05D006880 ORTHO05D008638 7.9e-79 297.4 191 80.1
FAN26G3452 Fragaria x ananassa HOM05D006880 ORTHO05D008638 1.0e-78 297.0 191 80.1
SGA_v2.0_scaffold178G39501 Striga asiatica HOM05D006880 ORTHO05D008638 1.3e-78 296.6 201 75.6
Duzib147G0678 Durio zibethinus HOM05D006880 ORTHO05D008638 2.3e-78 295.8 184 80.4
Gorai.011G115200 Gossypium raimondii HOM05D006880 ORTHO05D008638 3.9e-78 295.0 191 79.6
Hma1.2p1_0006F.1_g004965 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 8.7e-78 293.9 179 82.7
Hma1.2p1_0025F.1_g016260 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 8.7e-78 293.9 179 82.7
Hma1.2p1_1667F.1_g296585 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 8.7e-78 293.9 179 82.7
Cc07_g17330 Coffea canephora HOM05D006880 ORTHO05D008638 1.5e-77 293.1 185 79.5
Actinidia06675 Actinidia chinensis HOM05D006880 ORTHO05D008638 1.9e-77 292.7 180 80.0
CANSAT01G0776 Cannabis sativa HOM05D006880 ORTHO05D008638 2.5e-77 292.4 196 78.6
QL06p051802 Quercus lobata HOM05D006880 ORTHO05D008638 5.6e-77 291.2 192 78.1
Cpa.g.sc453.1 Carica papaya HOM05D006880 ORTHO05D008638 7.4e-77 290.8 197 74.6
Migut.H01108 Erythranthe guttata HOM05D006880 ORTHO05D008638 7.4e-77 290.8 180 80.0
TWI79G0189 Tripterygium wilfordii HOM05D006880 ORTHO05D008638 7.4e-77 290.8 191 78.0
Thecc.01G120600 Theobroma cacao HOM05D006880 ORTHO05D008638 3.7e-76 288.5 199 75.9
CiPaw.03G123600 Carya illinoinensis HOM05D006880 ORTHO05D008638 4.8e-76 288.1 180 78.9
TPR.G18722 Trifolium pratense HOM05D006880 ORTHO05D008638 6.2e-76 287.7 194 75.8
COL.COLO4_22415 Corchorus olitorius HOM05D006880 ORTHO05D008638 8.2e-76 287.3 181 80.7
CiPaw.04G083800 Carya illinoinensis HOM05D006880 ORTHO05D008638 1.1e-75 287.0 183 76.5
Solyc11g005390.3 Solanum lycopersicum HOM05D006880 ORTHO05D008638 1.1e-75 287.0 193 74.6
Sopen11g001400 Solanum pennellii HOM05D006880 ORTHO05D008638 1.1e-75 287.0 193 74.6
Ca_16914_v3 Cicer arietinum L. HOM05D006880 ORTHO05D008638 2.4e-75 285.8 193 77.2
Duzib187G0911 Durio zibethinus HOM05D006880 ORTHO05D008638 2.4e-75 285.8 196 76.0
Lalb_Chr11g0068241 Lupinus albus HOM05D006880 ORTHO05D008638 3.1e-75 285.4 194 75.3
Gorai.002G151100 Gossypium raimondii HOM05D006880 ORTHO05D008638 4.0e-75 285.0 193 75.6
Potri.019G006500 Populus trichocarpa HOM05D006880 ORTHO05D008638 4.0e-75 285.0 196 73.0
PGSC0003DMG400003965 Solanum tuberosum HOM05D006880 ORTHO05D008638 4.0e-75 285.0 193 74.6
CDE08G0745 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 5.3e-75 284.6 189 75.1
GSVIVG01026589001 Vitis vinifera HOM05D006880 ORTHO05D008638 9.0e-75 283.9 169 83.4
Glyma.06G149800 Glycine max HOM05D006880 ORTHO05D008638 1.5e-74 283.1 195 75.9
Atru.chr4.544 Acer truncatum HOM05D006880 ORTHO05D008638 4.5e-74 281.6 196 72.4
Lalb_Chr08g0238661 Lupinus albus HOM05D006880 ORTHO05D008638 5.8e-74 281.2 190 75.3
Phvul.009G147400 Phaseolus vulgaris HOM05D006880 ORTHO05D008638 5.8e-74 281.2 177 80.2
Medtr3g095480 Medicago truncatula HOM05D006880 ORTHO05D008638 7.6e-74 280.8 196 75.0
CSS0034618 Camellia sinensis var. sinensis HOM05D006880 ORTHO05D008638 1.0e-73 280.4 193 75.6
Glyma.09G116700 Glycine max HOM05D006880 ORTHO05D008638 1.7e-73 279.6 189 75.7
Glyma.09G116500 Glycine max HOM05D006880 ORTHO05D008638 2.2e-73 279.3 193 75.6
Lj1g0010031 Lotus japonicus HOM05D006880 ORTHO05D008638 3.8e-73 278.5 190 75.3
Sabra19G0023300 Salix brachista HOM05D006880 ORTHO05D008638 4.9e-73 278.1 195 71.8
Lj2A591T43 Lonicera japonica HOM05D006880 ORTHO05D008638 6.5e-73 277.7 193 74.6
Psat5g063920 Pisum sativum HOM05D006880 ORTHO05D008638 6.5e-73 277.7 196 74.0
Sabra16G0194800 Salix brachista HOM05D006880 ORTHO05D008638 6.5e-73 277.7 199 71.9
Sabra19G0018800 Salix brachista HOM05D006880 ORTHO05D008638 8.4e-73 277.3 195 71.8
Ciclev10026534m.g Citrus clementina HOM05D006880 ORTHO05D008638 4.2e-72 275.0 199 73.9
Manes.12G148400 Manihot esculenta HOM05D006880 ORTHO05D008638 9.3e-72 273.9 203 70.4
Potri.001G309000 Populus trichocarpa HOM05D006880 ORTHO05D008638 1.6e-71 273.1 182 75.8
ClCG01G015680 Citrullus lanatus HOM05D006880 ORTHO05D008638 2.1e-71 272.7 182 74.7
arahy.Tifrunner.gnm1.ann1.546D2B Arachis hypogaea HOM05D006880 ORTHO05D008638 7.9e-71 270.8 187 74.9
MBI02_g23402_MAGBIO Magnolia biondii HOM05D006880 ORTHO05D008638 7.9e-71 270.8 179 76.5
HanXRQChr05g0137731 Helianthus annuus HOM05D006880 ORTHO05D008638 1.8e-70 269.6 188 72.9
MD01G1016600 Malus domestica HOM05D006880 ORTHO05D008638 2.3e-70 269.2 196 72.4
MELO3C008029.2 Cucumis melo HOM05D006880 ORTHO05D008638 5.1e-70 268.1 179 74.3
arahy.Tifrunner.gnm1.ann1.91R8ME Arachis hypogaea HOM05D006880 ORTHO05D008638 1.1e-69 266.9 190 72.6
AUR62017937 Chenopodium quinoa HOM05D006880 ORTHO05D008638 1.5e-69 266.5 205 68.8
HPP92_025026 Vanilla planifolia HOM05D006880 ORTHO05D008638 3.3e-69 265.4 186 72.6
HPP92_025033 Vanilla planifolia HOM05D006880 ORTHO05D008638 3.3e-69 265.4 186 72.6
Aa31LG8G5640 Aethionema arabicum HOM05D006880 ORTHO05D008638 3.7e-68 261.9 201 70.1
THA.LOC104821864 Tarenaya hassleriana HOM05D006880 ORTHO05D008638 2.4e-67 259.2 178 73.0
BcaC02g12236 Brassica carinata HOM05D006880 ORTHO05D008638 5.3e-67 258.1 193 69.9
BcaC05g28570 Brassica carinata HOM05D006880 ORTHO05D008638 5.3e-67 258.1 193 69.9
C05p46720 Brassica napus HOM05D006880 ORTHO05D008638 5.3e-67 258.1 193 69.9
BolC5t33399H Brassica oleracea HOM05D006880 ORTHO05D008638 5.3e-67 258.1 193 69.9
PGR119G1657 Punica granatum HOM05D006880 ORTHO05D008638 2.6e-66 255.8 179 76.0
Nn5g28731 Nelumbo nucifera HOM05D006880 ORTHO05D008638 4.5e-66 255.0 184 72.8
Sc03g0004730 Simmondsia chinensis HOM05D006880 ORTHO05D008638 4.5e-66 255.0 175 72.0
Carub.0003s1862 Capsella rubella HOM05D006880 ORTHO05D008638 1.0e-65 253.8 198 68.7
Sp1g36150 Schrenkiella parvula HOM05D006880 ORTHO05D008638 1.0e-65 253.8 194 69.6
AL3G32180 Arabidopsis lyrata HOM05D006880 ORTHO05D008638 3.8e-65 251.9 190 68.4
BcaB06g25933 Brassica carinata HOM05D006880 ORTHO05D008638 3.8e-65 251.9 194 67.5
Sp3g16890 Schrenkiella parvula HOM05D006880 ORTHO05D008638 5.0e-65 251.5 197 67.0
AT3G18800 Arabidopsis thaliana HOM05D006880 ORTHO05D008638 8.5e-65 250.8 190 68.4
ATR0772G040 Amborella trichopoda HOM05D006880 ORTHO05D008638 4.2e-64 248.4 186 67.2
Gohir.D11G233000 Gossypium hirsutum HOM05D006880 ORTHO05D008638 5.5e-64 248.1 198 68.2
A05p30800 Brassica napus HOM05D006880 ORTHO05D008638 7.2e-64 247.7 196 67.3
BraA05t21922Z Brassica rapa HOM05D006880 ORTHO05D008638 7.2e-64 247.7 196 67.3
CARHR094210 Cardamine hirsuta HOM05D006880 ORTHO05D008638 7.2e-64 247.7 201 65.7
Dinv09943 Davidia involucrata HOM05D006880 ORTHO05D008638 1.0e-62 243.8 154 79.9
Thhalv10022284m.g Eutrema salsugineum HOM05D006880 ORTHO05D008638 1.8e-62 243.0 204 65.2
Sed0021560 Sechium edule HOM05D006880 ORTHO05D008638 8.8e-62 240.7 173 70.5
CDE06G1704 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 4.8e-60 235.0 148 76.4
Peaxi162Scf00025g02313 Petunia axillaris HOM05D006880 ORTHO05D008638 9.1e-59 230.7 153 74.5
CsaV3_6G041940 Cucumis sativus L. HOM05D006880 ORTHO05D008638 4.7e-55 218.4 153 70.6
BcaC07g37070 Brassica carinata HOM05D006880 ORTHO05D008638 5.9e-50 201.4 189 60.3
Mapoly0012s0135 Marchantia polymorpha HOM05D006880 ORTHO05D008638 3.8e-49 198.7 177 56.5
A08p04110 Brassica napus HOM05D006880 ORTHO05D008638 3.0e-46 189.1 146 67.1
SMO351G0309 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 3.9e-46 188.7 177 53.7
Nn3g21133 Nelumbo nucifera HOM05D006880 ORTHO05D008638 3.3e-45 185.7 184 57.1
SMO196G0105 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 2.2e-41 172.9 176 50.0
Nitab4.5_0011433g0020 Nicotiana tabacum HOM05D006880 ORTHO05D008638 1.1e-40 170.6 108 77.8
Nitab4.5_0023130g0010 Nicotiana tabacum HOM05D006880 ORTHO05D008638 1.5e-40 170.2 108 76.9
AagrBONN_evm.TU.Sc2ySwM_228.250 Anthoceros agrestis HOM05D006880 ORTHO05D008638 5.5e-40 168.3 175 49.1
Nn8g40983 Nelumbo nucifera HOM05D006880 ORTHO05D008638 6.3e-36 154.8 182 51.6
DCAR_016722 Daucus carota HOM05D006880 ORTHO05D008638 3.1e-35 152.5 101 75.2
Os04g0687200 Oryza sativa ssp. japonica HOM05D006880 ORTHO05D008638 4.7e-31 138.7 117 59.0
Eucgr.B01306 Eucalyptus grandis HOM05D006880 ORTHO05D008638 6.8e-22 108.2 131 48.1
Lj6g0028046 Lotus japonicus HOM05D006880 ORTHO05D008638 2.3e-17 93.2 58 75.9
Nn3g19205 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.2e-15 87.4 66 71.2
Eucgr.B00961 Eucalyptus grandis HOM05D006880 ORTHO05D008638 5.4e-11 72.0 46 76.1
BraA08t32436Z Brassica rapa HOM05D006880 ORTHO05D008638 1.7e-09 67.0 46 76.1


User provided reference genes

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