Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G5366 Papaver somniferum HOM05D007447 ORTHO05D009372 2.1e-150 535.8 290 100.0
PSO675G8572 Papaver somniferum HOM05D007447 ORTHO05D009372 2.1e-150 535.8 290 100.0
TAR627G0071 Trochodendron aralioides HOM05D007447 ORTHO05D009372 3.0e-69 266.2 297 52.5
Dinv40599 Davidia involucrata HOM05D007447 ORTHO05D009372 2.5e-63 246.5 297 50.8
QL05p042219 Quercus lobata HOM05D007447 ORTHO05D009372 3.0e-61 239.6 296 49.3
CSS0015196 Camellia sinensis var. sinensis HOM05D007447 ORTHO05D009372 4.9e-59 232.3 263 49.4
Aqoxy1G02279 Aquilegia oxysepala HOM05D007447 ORTHO05D009372 2.0e-57 226.9 287 44.6
GSVIVG01021110001 Vitis vinifera HOM05D007447 ORTHO05D009372 2.0e-57 226.9 246 50.0
Thecc.06G181300 Theobroma cacao HOM05D007447 ORTHO05D009372 3.5e-57 226.1 297 47.8
COL.COLO4_31413 Corchorus olitorius HOM05D001455 ORTHO05D001587 7.8e-57 224.9 261 50.2
TWI63G0216 Tripterygium wilfordii HOM05D007447 ORTHO05D009372 6.6e-56 221.9 257 48.6
Nn1g06424 Nelumbo nucifera HOM05D007447 ORTHO05D009372 5.6e-55 218.8 268 51.9
PGR042G0911 Punica granatum HOM05D007447 ORTHO05D009372 2.8e-54 216.5 248 49.6
Gohir.D10G028300 Gossypium hirsutum HOM05D007447 ORTHO05D009372 2.3e-53 213.4 283 46.6
Gorai.011G030100 Gossypium raimondii HOM05D007447 ORTHO05D009372 1.5e-52 210.7 283 44.9
Eucgr.E03244 Eucalyptus grandis HOM05D007447 ORTHO05D009372 7.5e-52 208.4 253 48.2
Nitab4.5_0001955g0160 Nicotiana tabacum HOM05D007447 ORTHO05D009372 1.7e-51 207.2 257 46.7
Manes.16G031900 Manihot esculenta HOM05D007447 ORTHO05D009372 2.4e-50 203.4 258 48.8
Atru.chr10.1800 Acer truncatum HOM05D007447 ORTHO05D009372 4.1e-50 202.6 278 43.5
Ciclev10018161m.g Citrus clementina HOM05D007447 ORTHO05D009372 3.5e-49 199.5 220 49.1
RcHm_v2.0_Chr5g0009131 Rosa chinensis HOM05D007447 ORTHO05D009372 7.8e-49 198.4 257 41.6
FvH4_3g08660 Fragaria vesca HOM05D007447 ORTHO05D009372 1.3e-48 197.6 252 42.5
FAN16G2340 Fragaria x ananassa HOM05D007447 ORTHO05D009372 5.0e-48 195.7 249 42.6
FAN21G3311 Fragaria x ananassa HOM05D001455 ORTHO05D001587 5.0e-48 195.7 247 42.5
CiPaw.10G052600 Carya illinoinensis HOM05D007447 ORTHO05D009372 8.6e-48 194.9 232 48.3
ClCG03G008020 Citrullus lanatus HOM05D007447 ORTHO05D009372 8.6e-48 194.9 292 40.1
Solyc02g077690.4 Solanum lycopersicum HOM05D007447 ORTHO05D009372 2.5e-47 193.4 285 42.5
CANSAT35G0297 Cannabis sativa HOM05D007447 ORTHO05D009372 4.7e-46 189.1 259 44.4
Cfa000525 Carpinus fangiana HOM05D007447 ORTHO05D009372 6.2e-46 188.7 279 42.7
FAN11G2802 Fragaria x ananassa HOM05D007447 ORTHO05D009372 1.8e-45 187.2 255 41.6
Glyma.13G235800 Glycine max HOM05D007447 ORTHO05D009372 5.2e-45 185.7 249 45.8
CsaV3_1G012550 Cucumis sativus L. HOM05D007447 ORTHO05D009372 2.0e-44 183.7 256 41.8
Sed0019225 Sechium edule HOM05D007447 ORTHO05D009372 5.8e-44 182.2 254 42.5
VMungo0540G1135 Vigna mungo HOM05D007447 ORTHO05D009372 9.8e-44 181.4 275 41.5
COL.COLO4_14300 Corchorus olitorius HOM05D001061 ORTHO05D006729 1.3e-43 181.0 259 44.4
MSTRG.14713 Avicennia marina HOM05D007447 ORTHO05D009372 4.9e-43 179.1 293 40.3
Gohir.A05G159100 Gossypium hirsutum HOM05D007447 ORTHO05D009372 4.9e-43 179.1 251 46.2
Cpa.g.sc27.6 Carica papaya HOM05D007447 ORTHO05D009372 1.4e-42 177.6 264 43.2
Psat1g202800 Pisum sativum HOM05D007447 ORTHO05D009372 3.2e-42 176.4 278 39.6
Phvul.006G182400 Phaseolus vulgaris HOM05D007447 ORTHO05D009372 5.4e-42 175.6 282 40.1
Hma1.2p1_0558F.1_g178510 Hydrangea macrophylla HOM05D007447 ORTHO05D009372 1.2e-41 174.5 179 50.3
MD10G1289400 Malus domestica HOM05D007447 ORTHO05D009372 2.0e-41 173.7 245 39.6
Actinidia07600 Actinidia chinensis HOM05D007447 ORTHO05D009372 3.5e-41 172.9 239 44.8
Duzib160G0617 Durio zibethinus HOM05D007447 ORTHO05D009372 1.7e-40 170.6 288 42.0
Migut.H01471 Erythranthe guttata HOM05D007447 ORTHO05D009372 2.3e-40 170.2 260 42.7
arahy.Tifrunner.gnm1.ann1.45S4HY Arachis hypogaea HOM05D007447 ORTHO05D009372 5.0e-40 169.1 283 39.9
Aqoxy193s001 Aquilegia oxysepala HOM05D007447 ORTHO05D009372 6.6e-40 168.7 190 47.9
CAN.G529.53 Capsicum annuum HOM05D007447 ORTHO05D009372 3.3e-39 166.4 187 48.7
unitig_61.g26088 Utricularia gibba HOM05D007447 ORTHO05D009372 3.3e-39 166.4 282 40.1
arahy.Tifrunner.gnm1.ann1.MUCA0D Arachis hypogaea HOM05D007447 ORTHO05D009372 4.3e-39 166.0 284 39.1
Thhalv10008438m.g Eutrema salsugineum HOM05D007447 ORTHO05D009372 4.3e-39 166.0 283 36.4
Haze_06385 Corylus avellana HOM05D007882 ORTHO05D009870 7.3e-39 165.2 273 39.9
Medtr2g014440 Medicago truncatula HOM05D007447 ORTHO05D009372 7.3e-39 165.2 272 38.2
Lj6g0005430 Lotus japonicus HOM05D007447 ORTHO05D009372 1.6e-38 164.1 285 38.9
AL1G42040 Arabidopsis lyrata HOM05D007447 ORTHO05D009372 2.1e-38 163.7 280 37.1
Nitab4.5_0004359g0010 Nicotiana tabacum HOM05D007882 ORTHO05D009870 2.8e-38 163.3 237 42.2
AT1G28410 Arabidopsis thaliana HOM05D007447 ORTHO05D009372 2.3e-37 160.2 283 37.8
TPR.G11645 Trifolium pratense HOM05D007447 ORTHO05D009372 2.3e-37 160.2 180 47.8
ECA248G3772 Erigeron canadensis HOM05D007447 ORTHO05D009372 8.9e-37 158.3 246 40.2
vmacro15930 Vaccinium macrocarpon HOM05D007447 ORTHO05D009372 1.2e-36 157.9 285 36.8
Carub.0001s2689 Capsella rubella HOM05D007447 ORTHO05D009372 2.6e-36 156.8 282 36.2
CARHR027920 Cardamine hirsuta HOM05D007447 ORTHO05D009372 5.8e-36 155.6 284 38.0
Ca_00359_v3 Cicer arietinum L. HOM05D007447 ORTHO05D009372 6.4e-35 152.1 180 46.7
HanXRQChr08g0213981 Helianthus annuus HOM05D007447 ORTHO05D009372 1.4e-34 151.0 242 40.1
Peaxi162Scf00926g00028 Petunia axillaris HOM05D007447 ORTHO05D009372 1.2e-33 147.9 281 37.7
Sopen02g022590 Solanum pennellii HOM05D007447 ORTHO05D009372 1.6e-33 147.5 257 38.5
DCAR_008005 Daucus carota HOM05D007447 ORTHO05D009372 2.1e-33 147.1 234 40.2
Sc17g0005950 Simmondsia chinensis HOM05D007447 ORTHO05D009372 2.7e-33 146.7 268 38.1
Lalb_Chr18g0059391 Lupinus albus HOM05D007447 ORTHO05D009372 1.7e-32 144.1 252 38.5
Sp1g24690 Schrenkiella parvula HOM05D007447 ORTHO05D009372 6.6e-32 142.1 266 34.6
THA.LOC104814436 Tarenaya hassleriana HOM05D007447 ORTHO05D009372 2.5e-31 140.2 278 34.2
BraA09t39273Z Brassica rapa HOM05D007447 ORTHO05D009372 1.4e-29 134.4 274 33.9
Hund23805 Selenicereus undatus HOM05D007447 ORTHO05D009372 1.8e-29 134.0 255 35.3
A09p37630 Brassica napus HOM05D007447 ORTHO05D009372 2.3e-29 133.7 227 36.6
C05p27420 Brassica napus HOM05D007447 ORTHO05D009372 8.9e-29 131.7 229 35.4
Cc02_g13820 Coffea canephora HOM05D007447 ORTHO05D009372 8.9e-29 131.7 236 35.2
Prupe.3G304000 Prunus persica HOM05D007447 ORTHO05D009372 1.2e-28 131.3 210 37.6
BolC5t31458H Brassica oleracea HOM05D007447 ORTHO05D009372 2.0e-28 130.6 212 36.3
Oeu012152.1 Olea europaea HOM05D007447 ORTHO05D009372 8.4e-27 125.2 242 35.1
EL10Ac8g20436 Beta vulgaris HOM05D007447 ORTHO05D009372 4.1e-26 122.9 266 32.0
Ah.09g237570 Amaranthus hybridus HOM05D007447 ORTHO05D009372 5.4e-26 122.5 277 32.1
Gohir.A09G104400 Gossypium hirsutum HOM05D007447 ORTHO05D009372 1.2e-25 121.3 209 39.2
BcaC05g26860 Brassica carinata HOM05D007447 ORTHO05D009372 2.1e-25 120.6 229 34.9
AUR62014866 Chenopodium quinoa HOM05D007447 ORTHO05D009372 1.3e-24 117.9 256 34.0
MBI06_g04396_MAGBIO Magnolia biondii HOM05D007447 ORTHO05D009372 1.3e-24 117.9 279 33.3
SalBow7G4252 Salvia bowleyana HOM05D007447 ORTHO05D009372 1.7e-24 117.5 235 35.3
SalBow7G4859 Salvia bowleyana HOM05D007447 ORTHO05D009372 1.7e-24 117.5 235 35.3
Gohir.A10G027900 Gossypium hirsutum HOM05D007447 ORTHO05D009372 3.0e-24 116.7 190 38.9
Rhsim02G0134600 Rhododendron simsii HOM05D007447 ORTHO05D009372 1.5e-23 114.4 280 32.5
MELO3C000075.2 Cucumis melo HOM05D007447 ORTHO05D009372 5.6e-23 112.5 136 44.1
Sabra04G0030400 Salix brachista HOM05D007882 ORTHO05D009870 5.4e-18 95.9 265 32.1
CDE04G0034 Ceratophyllum demersum HOM05D002561 ORTHO05D006466 6.0e-17 92.4 152 38.2
Lsat_1_v5_gn_1_120761 Lactuca sativa HOM05D007447 ORTHO05D009372 6.0e-17 92.4 211 32.7
Os02g0305600 Oryza sativa ssp. japonica HOM05D007447 ORTHO05D009372 3.9e-16 89.7 289 29.1
Potri.004G048500 Populus trichocarpa HOM05D007447 ORTHO05D009372 9.6e-15 85.1 121 46.3
ATR0730G049 Amborella trichopoda HOM05D007447 ORTHO05D009372 9.0e-13 78.6 160 35.6
MELO3C027350.2 Cucumis melo HOM05D007447 ORTHO05D009372 7.6e-12 75.5 102 44.1
Zm00001eb203200 Zea mays HOM05D007447 ORTHO05D009372 9.9e-12 75.1 304 24.3
HPP92_005282 Vanilla planifolia HOM05D007447 ORTHO05D009372 9.3e-10 68.6 136 32.4
AUR62031072 Chenopodium quinoa HOM05D007447 ORTHO05D009372 2.3e-08 63.9 217 29.5
Gohir.A01G124600 Gossypium hirsutum HOM05D007447 ORTHO05D009372 6.7e-08 62.4 70 44.3
Gohir.A01G131222 Gossypium hirsutum HOM05D007447 ORTHO05D009372 6.7e-08 62.4 70 44.3
Gohir.A02G158500 Gossypium hirsutum HOM05D007447 ORTHO05D009372 6.7e-08 62.4 70 44.3


User provided reference genes

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