Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G8539 Papaver somniferum HOM05D006244 ORTHO05D007401 3.6e-177 624.8 315 100.0
PSO732G0675 Papaver somniferum HOM05D006244 ORTHO05D007401 3.2e-157 558.5 315 90.5
TAR636G2962 Trochodendron aralioides HOM05D006244 ORTHO05D007401 3.0e-115 419.1 314 68.2
Dinv22748 Davidia involucrata HOM05D006244 ORTHO05D007401 4.4e-106 388.7 307 65.8
CSS0032343 Camellia sinensis var. sinensis HOM05D006244 ORTHO05D007401 2.7e-103 379.4 314 63.4
Actinidia11297 Actinidia chinensis HOM05D006244 ORTHO05D007401 6.6e-102 374.8 310 62.9
QL05p011148 Quercus lobata HOM05D006244 ORTHO05D007401 1.5e-98 363.6 313 59.7
CANSAT78G1025 Cannabis sativa HOM05D006244 ORTHO05D007401 7.5e-98 361.3 314 58.6
Aqoxy2G04144 Aquilegia oxysepala HOM05D006244 ORTHO05D007401 3.7e-97 359.0 314 62.7
QL10p050150 Quercus lobata HOM05D006244 ORTHO05D007401 6.4e-97 358.2 313 59.4
Cfa020094 Carpinus fangiana HOM05D006244 ORTHO05D007401 3.2e-96 355.9 314 59.9
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla HOM05D006244 ORTHO05D007401 1.6e-95 353.6 314 59.9
Ciclev10021382m.g Citrus clementina HOM05D006244 ORTHO05D007401 3.5e-95 352.4 313 58.8
Duzib175G0007 Durio zibethinus HOM05D006244 ORTHO05D007401 7.8e-95 351.3 314 55.7
Potri.017G028900 Populus trichocarpa HOM05D006244 ORTHO05D007401 1.7e-94 350.1 313 56.5
Cpa.g.sc9.298 Carica papaya HOM05D006244 ORTHO05D007401 2.3e-94 349.7 312 59.0
Manes.04G043800 Manihot esculenta HOM05D006244 ORTHO05D007401 2.3e-94 349.7 314 57.3
CiPaw.02G053900 Carya illinoinensis HOM05D006244 ORTHO05D007401 3.9e-94 349.0 314 58.3
Sc19g0002910 Simmondsia chinensis HOM05D006244 ORTHO05D007401 3.9e-94 349.0 313 57.2
AUR62023861 Chenopodium quinoa HOM05D006244 ORTHO05D007401 5.0e-94 348.6 315 56.8
Gorai.011G141500 Gossypium raimondii HOM05D006244 ORTHO05D007401 5.0e-94 348.6 314 54.8
ECA248G0275 Erigeron canadensis HOM05D006244 ORTHO05D007401 1.5e-93 347.1 312 57.7
Duzib151G0743 Durio zibethinus HOM05D006244 ORTHO05D007401 1.9e-93 346.7 314 55.1
Hund03170 Selenicereus undatus HOM05D006244 ORTHO05D007401 1.9e-93 346.7 313 57.2
Rhsim09G0025200 Rhododendron simsii HOM05D006244 ORTHO05D007401 5.6e-93 345.1 283 62.9
Gohir.D10G128300 Gossypium hirsutum HOM05D006244 ORTHO05D007401 9.5e-93 344.4 314 54.5
EL10Ac3g05981 Beta vulgaris HOM05D006244 ORTHO05D007401 2.1e-92 343.2 314 57.0
GSVIVG01010791001 Vitis vinifera HOM05D006244 ORTHO05D007401 2.1e-92 343.2 304 59.9
Atru.chr4.1240 Acer truncatum HOM05D006244 ORTHO05D007401 8.1e-92 341.3 313 56.9
Sabra17G0017500 Salix brachista HOM05D006244 ORTHO05D007401 1.1e-91 340.9 313 55.6
Gohir.A10G138500 Gossypium hirsutum HOM05D006244 ORTHO05D007401 2.3e-91 339.7 314 53.5
RcHm_v2.0_Chr4g0406631 Rosa chinensis HOM05D006244 ORTHO05D007401 5.2e-91 338.6 314 56.4
COL.COLO4_12977 Corchorus olitorius HOM05D006244 ORTHO05D007401 6.8e-91 338.2 337 51.6
THA.LOC104803749 Tarenaya hassleriana HOM05D006244 ORTHO05D007401 3.4e-90 335.9 312 55.4
Peaxi162Scf00126g00623 Petunia axillaris HOM05D006244 ORTHO05D007401 2.9e-89 332.8 315 56.8
Lalb_Chr22g0352091 Lupinus albus HOM05D006244 ORTHO05D007401 4.9e-89 332.0 318 56.0
Lsat_1_v5_gn_1_77900 Lactuca sativa HOM05D006244 ORTHO05D007401 1.1e-88 330.9 315 53.0
PGSC0003DMG400022864 Solanum tuberosum HOM05D006244 ORTHO05D007401 1.1e-88 330.9 322 55.3
Sopen11g020640 Solanum pennellii HOM05D006244 ORTHO05D007401 1.4e-88 330.5 321 54.5
Sp5g03670 Schrenkiella parvula HOM05D006244 ORTHO05D007401 3.2e-88 329.3 318 54.1
FAN07G2433 Fragaria x ananassa HOM05D006244 ORTHO05D007401 4.1e-88 328.9 318 54.4
MBI08_g33169_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 4.1e-88 328.9 289 61.6
Solyc11g045210.2 Solanum lycopersicum HOM05D006244 ORTHO05D007401 5.4e-88 328.6 321 54.2
Nitab4.5_0008822g0040 Nicotiana tabacum HOM05D006244 ORTHO05D007401 1.2e-87 327.4 314 57.0
Thhalv10006132m.g Eutrema salsugineum HOM05D006244 ORTHO05D007401 1.6e-87 327.0 312 55.1
BcaB02g08221 Brassica carinata HOM05D006244 ORTHO05D007401 2.1e-87 326.6 312 56.1
Cc07_g21300 Coffea canephora HOM05D006244 ORTHO05D007401 2.1e-87 326.6 314 55.1
HanXRQChr11g0343701 Helianthus annuus HOM05D006244 ORTHO05D007401 2.1e-87 326.6 315 53.7
AT3G59490 Arabidopsis thaliana HOM05D006244 ORTHO05D007401 2.7e-87 326.2 312 54.2
Nitab4.5_0004117g0020 Nicotiana tabacum HOM05D006244 ORTHO05D007401 3.5e-87 325.9 314 57.0
Ah.07g202200 Amaranthus hybridus HOM05D006244 ORTHO05D007401 4.6e-87 325.5 314 52.9
Thecc.04G177000 Theobroma cacao HOM05D006244 ORTHO05D007401 7.8e-87 324.7 314 52.5
Carub.0005s2622 Capsella rubella HOM05D006244 ORTHO05D007401 1.7e-86 323.6 312 53.5
FvH4_4g10850 Fragaria vesca HOM05D006244 ORTHO05D007401 1.7e-86 323.6 314 54.5
FAN12G2117 Fragaria x ananassa HOM05D006244 ORTHO05D007401 1.7e-86 323.6 314 54.5
BcaC07g40479 Brassica carinata HOM05D006244 ORTHO05D007401 3.0e-86 322.8 312 54.2
AUR62002326 Chenopodium quinoa HOM05D006244 ORTHO05D007401 3.9e-86 322.4 314 55.1
AL5G41400 Arabidopsis lyrata HOM05D006244 ORTHO05D007401 5.1e-86 322.0 312 54.5
MSTRG.9759 Avicennia marina HOM05D006244 ORTHO05D007401 6.6e-86 321.6 319 52.4
C08p34500 Brassica napus HOM05D006244 ORTHO05D007401 6.6e-86 321.6 318 53.8
BolC8t51051H Brassica oleracea HOM05D006244 ORTHO05D007401 6.6e-86 321.6 318 53.8
MELO3C009823.2 Cucumis melo HOM05D006244 ORTHO05D007401 6.6e-86 321.6 314 53.2
BcaNung05942 Brassica carinata HOM05D006244 ORTHO05D007401 8.6e-86 321.2 306 54.9
A04p02170 Brassica napus HOM05D006244 ORTHO05D007401 1.9e-85 320.1 312 54.8
CAN.G31.8 Capsicum annuum HOM05D006244 ORTHO05D007401 2.5e-85 319.7 316 54.1
MD04G1042500 Malus domestica HOM05D006244 ORTHO05D007401 3.3e-85 319.3 314 54.8
Prupe.1G196900 Prunus persica HOM05D006244 ORTHO05D007401 9.5e-85 317.8 314 53.5
BcaC07g40478 Brassica carinata HOM05D006244 ORTHO05D007401 1.6e-84 317.0 312 53.2
PGR142G0422 Punica granatum HOM05D006244 ORTHO05D007401 2.8e-84 316.2 315 52.7
SalBow3G2237 Salvia bowleyana HOM05D006244 ORTHO05D007401 2.8e-84 316.2 314 51.9
Eucgr.H00368 Eucalyptus grandis HOM05D006244 ORTHO05D007401 3.6e-84 315.8 316 52.8
TWI38G0370 Tripterygium wilfordii HOM05D006244 ORTHO05D007401 3.6e-84 315.8 316 54.4
ClCG10G015550 Citrullus lanatus HOM05D006244 ORTHO05D007401 4.7e-84 315.5 314 51.9
Aa31LG10G13810 Aethionema arabicum HOM05D006244 ORTHO05D007401 6.2e-84 315.1 312 52.6
BraA04t15944Z Brassica rapa HOM05D006244 ORTHO05D007401 6.2e-84 315.1 312 53.8
CsaV3_3G040880 Cucumis sativus L. HOM05D006244 ORTHO05D007401 6.2e-84 315.1 314 52.9
CARHR169870 Cardamine hirsuta HOM05D006244 ORTHO05D007401 8.1e-84 314.7 312 53.2
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea HOM05D006244 ORTHO05D007401 1.1e-83 314.3 319 52.4
Lj3g0008901 Lotus japonicus HOM05D006244 ORTHO05D007401 1.4e-83 313.9 316 54.4
A09p51770 Brassica napus HOM05D006244 ORTHO05D007401 1.8e-83 313.5 312 53.2
Migut.G01000 Erythranthe guttata HOM05D006244 ORTHO05D007401 5.2e-83 312.0 315 50.5
Psat5g289400 Pisum sativum HOM05D006244 ORTHO05D007401 2.0e-82 310.1 315 53.3
Nn3g18564 Nelumbo nucifera HOM05D006244 ORTHO05D007401 3.4e-82 309.3 314 53.5
Glyma.15G029700 Glycine max HOM05D006244 ORTHO05D007401 3.8e-81 305.8 316 53.5
TPR.G18836 Trifolium pratense HOM05D006244 ORTHO05D007401 2.4e-80 303.1 315 52.7
BraA09t40612Z Brassica rapa HOM05D006244 ORTHO05D007401 5.4e-80 302.0 309 51.1
Medtr2g098960 Medicago truncatula HOM05D006244 ORTHO05D007401 7.1e-80 301.6 315 51.4
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea HOM05D006244 ORTHO05D007401 1.0e-78 297.7 308 51.6
ATR0743G009 Amborella trichopoda HOM05D006244 ORTHO05D007401 1.3e-78 297.4 314 47.5
unitig_0.g2404 Utricularia gibba HOM05D006244 ORTHO05D007401 1.5e-77 293.9 314 48.7
HPP92_001264 Vanilla planifolia HOM05D006244 ORTHO05D007401 5.6e-77 292.0 323 48.9
HPP92_001248 Vanilla planifolia HOM05D006244 ORTHO05D007401 9.6e-77 291.2 323 48.9
BolC4t24903H Brassica oleracea HOM05D006244 ORTHO05D007401 1.1e-72 277.7 312 50.3
Actinidia27645 Actinidia chinensis HOM05D006244 ORTHO05D007401 5.3e-67 258.8 218 61.5
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 8.4e-65 251.5 275 49.8
DCAR_028445 Daucus carota HOM05D006244 ORTHO05D007401 9.3e-64 248.1 260 50.0
Lju337A6T20 Lonicera japonica HOM05D006244 ORTHO05D007401 1.6e-60 237.3 283 49.1
C04p33420 Brassica napus HOM05D006244 ORTHO05D007401 3.7e-60 236.1 312 47.1
Phvul.005G153400 Phaseolus vulgaris HOM05D006244 ORTHO05D007401 5.3e-59 232.3 317 43.2
Sed0026513 Sechium edule HOM05D006244 ORTHO05D007401 2.6e-58 229.9 249 49.8
vmacro00644 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 2.9e-57 226.5 208 57.2
FAN17G1708 Fragaria x ananassa HOM05D006244 ORTHO05D007401 9.0e-51 204.9 212 51.4
Zm00001eb318410 Zea mays HOM05D006244 ORTHO05D007401 4.3e-45 186.0 262 40.1
MBI08_g09972_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 1.5e-42 177.6 195 52.8
Cfa015178 Carpinus fangiana HOM05D006244 ORTHO05D007401 5.0e-41 172.6 183 52.5
vmacro00645 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 1.0e-33 148.3 106 67.0
C04p32460 Brassica napus HOM05D006244 ORTHO05D007401 1.2e-31 141.4 228 37.7
Pp3c9_3600 Physcomitrium patens HOM05D006244 ORTHO05D007401 3.0e-30 136.7 310 30.0
Psat5g289440 Pisum sativum HOM05D006244 ORTHO05D007401 5.7e-29 132.5 118 57.6
Os09g0515300 Oryza sativa ssp. japonica HOM05D006244 ORTHO05D007401 4.5e-26 122.9 117 51.3
Sabra17G0062000 Salix brachista HOM05D006244 ORTHO05D007401 4.2e-24 116.3 131 48.9
Lj6A77G23 Lonicera japonica HOM05D006244 ORTHO05D007401 8.0e-23 112.1 104 54.8
Peaxi162Scf01193g00009 Petunia axillaris HOM05D006244 ORTHO05D007401 6.7e-22 109.0 142 45.8
Peaxi162Scf00533g00611 Petunia axillaris HOM05D006244 ORTHO05D007401 3.3e-21 106.7 149 45.0
Peaxi162Scf00066g02019 Petunia axillaris HOM05D006244 ORTHO05D007401 5.7e-21 105.9 142 45.8
Lju337A6G22 Lonicera japonica HOM05D006244 ORTHO05D007401 1.7e-20 104.4 68 69.1
Lj6C77T3 Lonicera japonica HOM05D006244 ORTHO05D007401 3.7e-20 103.2 67 70.1
Peaxi162Scf00272g00041 Petunia axillaris HOM05D006244 ORTHO05D007401 9.1e-19 98.6 131 45.8
Peaxi162Scf00627g00001 Petunia axillaris HOM05D006244 ORTHO05D007401 7.7e-18 95.5 131 45.0
SMO364G0376 Selaginella moellendorffii HOM05D006244 ORTHO05D007401 3.2e-16 90.1 298 25.2
Peaxi162Scf00404g00815 Petunia axillaris HOM05D006244 ORTHO05D007401 7.2e-16 89.0 145 39.3
BcaC02g10138 Brassica carinata HOM05D006244 ORTHO05D007401 1.6e-15 87.8 273 29.3
Glyma.13G344600 Glycine max HOM05D006244 ORTHO05D007401 1.4e-14 84.7 76 57.9
Zm00001eb239190 Zea mays HOM05D001072 ORTHO05D007401 4.0e-14 83.2 62 56.5
AagrBONN_evm.TU.Sc2ySwM_228.3866 Anthoceros agrestis HOM05D006244 ORTHO05D007401 7.0e-11 72.4 118 34.7
Peaxi162Scf00255g00049 Petunia axillaris HOM05D006244 ORTHO05D007401 6.5e-09 65.9 86 45.3


User provided reference genes

Program Settings